RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 LGR6Q9HBX8 967 aa9.66□□□□□ -0.86
SMPD3-210ENST00000567811 NUDCQ9Y266 331 aa9.66□□□□□ -0.86
SMPD3-210ENST00000567811 PAPPAQ13219 1627 aa9.66□□□□□ -0.86
SMPD3-210ENST00000567811 PPP2R1AP30153 589 aa9.65□□□□□ -0.86
SMPD3-210ENST00000567811 MTHFSDQ2M296 383 aaKnown RBP9.65□□□□□ -0.86
SMPD3-210ENST00000567811 AK7Q96M32 723 aa9.65□□□□□ -0.86
SMPD3-210ENST00000567811 TUBGCP6Q96RT7 1819 aa9.65□□□□□ -0.86
SMPD3-210ENST00000567811 SCN11AQ9UI33 1791 aa9.65□□□□□ -0.87
SMPD3-210ENST00000567811 C5P01031 1676 aa9.64□□□□□ -0.87
SMPD3-210ENST00000567811 RNMTO43148 476 aaKnown RBP9.64□□□□□ -0.87
SMPD3-210ENST00000567811 ITPK1Q13572 414 aa9.64□□□□□ -0.87
SMPD3-210ENST00000567811 RC3H1Q5TC82 1133 aaKnown RBP9.64□□□□□ -0.87
SMPD3-210ENST00000567811 FHDC1Q9C0D6 1143 aaPredicted RBP9.64□□□□□ -0.87
SMPD3-210ENST00000567811 PTCD1O75127 700 aaKnown RBP9.63□□□□□ -0.87
SMPD3-210ENST00000567811 TRAPPC3LQ5T215 181 aa9.63□□□□□ -0.87
SMPD3-210ENST00000567811 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
SMPD3-210ENST00000567811 SLC4A9Q96Q91 983 aa9.63□□□□□ -0.87
SMPD3-210ENST00000567811 SLC52A2Q9HAB3 445 aa9.63□□□□□ -0.87
SMPD3-210ENST00000567811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.62□□□□□ -0.87
SMPD3-210ENST00000567811 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
SMPD3-210ENST00000567811 FCHSD2O94868 740 aa9.62□□□□□ -0.87
SMPD3-210ENST00000567811 SSFA2P28290 1259 aa9.62□□□□□ -0.87
SMPD3-210ENST00000567811 DDX10Q13206 875 aaKnown RBP9.62□□□□□ -0.87
SMPD3-210ENST00000567811 SMIM5Q71RC9 77 aa9.62□□□□□ -0.87
SMPD3-210ENST00000567811 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
SMPD3-210ENST00000567811 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
SMPD3-210ENST00000567811 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
SMPD3-210ENST00000567811 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
SMPD3-210ENST00000567811 MYH14Q7Z406 1995 aaKnown RBP9.61□□□□□ -0.87
SMPD3-210ENST00000567811 GNPATO15228 680 aa9.61□□□□□ -0.87
SMPD3-210ENST00000567811 PHF14O94880 888 aa9.61□□□□□ -0.87
SMPD3-210ENST00000567811 U2AF1L5P0DN76 240 aaPredicted RBP9.61□□□□□ -0.87
SMPD3-210ENST00000567811 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMPD3-210ENST00000567811 IL17REQ8NFR9 667 aa9.61□□□□□ -0.87
SMPD3-210ENST00000567811 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
SMPD3-210ENST00000567811 PHACTR3Q96KR7 559 aa9.61□□□□□ -0.87
SMPD3-210ENST00000567811 KDM6AO15550 1401 aaPredicted RBP9.61□□□□□ -0.87
SMPD3-210ENST00000567811 RPS6KA4O75676 772 aa9.6□□□□□ -0.87
SMPD3-210ENST00000567811 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
SMPD3-210ENST00000567811 SLC39A6Q13433 755 aa9.6□□□□□ -0.87
SMPD3-210ENST00000567811 MSL1Q68DK7 614 aa9.6□□□□□ -0.87
SMPD3-210ENST00000567811 AMIGO3Q86WK7 504 aa9.6□□□□□ -0.87
SMPD3-210ENST00000567811 KLHL34Q8N239 644 aa9.6□□□□□ -0.87
SMPD3-210ENST00000567811 ZNF831Q5JPB2 1677 aa9.59□□□□□ -0.87
SMPD3-210ENST00000567811 RALBP1Q15311 655 aa9.59□□□□□ -0.87
SMPD3-210ENST00000567811 ARHGEF1Q92888 912 aaKnown RBP9.59□□□□□ -0.87
SMPD3-210ENST00000567811 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
SMPD3-210ENST00000567811 COL3A1P02461 1466 aaPredicted RBP9.59□□□□□ -0.87
SMPD3-210ENST00000567811 CHD4Q14839 1912 aa9.58□□□□□ -0.88
SMPD3-210ENST00000567811 NEFMP07197 916 aa9.58□□□□□ -0.88
SMPD3-210ENST00000567811 ADRA2BP18089 450 aa9.58□□□□□ -0.88
SMPD3-210ENST00000567811 RFC4P35249 363 aa9.58□□□□□ -0.88
SMPD3-210ENST00000567811 ZEB1P37275 1124 aaPredicted RBP9.58□□□□□ -0.88
SMPD3-210ENST00000567811 TEFQ10587 303 aa9.58□□□□□ -0.88
SMPD3-210ENST00000567811 GPR162Q16538 588 aa9.58□□□□□ -0.88
SMPD3-210ENST00000567811 NLGN1Q8N2Q7 840 aa9.58□□□□□ -0.88
SMPD3-210ENST00000567811 PNNQ9H307 717 aaKnown RBP9.58□□□□□ -0.88
SMPD3-210ENST00000567811 CD2APQ9Y5K6 639 aa9.58□□□□□ -0.88
SMPD3-210ENST00000567811 CNTNAP4Q9C0A0 1308 aa9.57□□□□□ -0.88
SMPD3-210ENST00000567811 CRKLP46109 303 aaKnown RBP9.57□□□□□ -0.88
SMPD3-210ENST00000567811 INTS5Q6P9B9 1019 aaKnown RBP9.57□□□□□ -0.88
SMPD3-210ENST00000567811 DNAJC10Q8IXB1 793 aa9.57□□□□□ -0.88
SMPD3-210ENST00000567811 RTF1Q92541 710 aaKnown RBP9.57□□□□□ -0.88
SMPD3-210ENST00000567811 MAP3K5Q99683 1374 aa9.57□□□□□ -0.88
SMPD3-210ENST00000567811 HTATSF1O43719 755 aaKnown RBP9.56□□□□□ -0.88
SMPD3-210ENST00000567811 CYP19A1P11511 503 aaPredicted RBP9.56□□□□□ -0.88
SMPD3-210ENST00000567811 YY1P25490 414 aa9.56□□□□□ -0.88
SMPD3-210ENST00000567811 TTC5Q8N0Z6 440 aa9.56□□□□□ -0.88
SMPD3-210ENST00000567811 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
SMPD3-210ENST00000567811 TEX13AQ9BXU3 409 aaPredicted RBP9.56□□□□□ -0.88
SMPD3-210ENST00000567811 COL5A3P25940 1745 aaPredicted RBP9.56□□□□□ -0.88
SMPD3-210ENST00000567811 BTBD11A6QL63 1104 aa9.55□□□□□ -0.88
SMPD3-210ENST00000567811 STARD3NLO95772 234 aa9.55□□□□□ -0.88
SMPD3-210ENST00000567811 ZNF790Q6PG37 636 aa9.55□□□□□ -0.88
SMPD3-210ENST00000567811 PELP1Q8IZL8 1130 aaKnown RBP9.55□□□□□ -0.88
SMPD3-210ENST00000567811 NLGN2Q8NFZ4 835 aa9.55□□□□□ -0.88
SMPD3-210ENST00000567811 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
SMPD3-210ENST00000567811 ZPR1O75312 459 aa9.54□□□□□ -0.88
SMPD3-210ENST00000567811 MMP10P09238 476 aa9.54□□□□□ -0.88
SMPD3-210ENST00000567811 GYS1P13807 737 aa9.54□□□□□ -0.88
SMPD3-210ENST00000567811 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
SMPD3-210ENST00000567811 ZNF496Q96IT1 587 aaPredicted RBP9.54□□□□□ -0.88
SMPD3-210ENST00000567811 ADAMTS7Q9UKP4 1686 aa9.54□□□□□ -0.88
SMPD3-210ENST00000567811 DLG5Q8TDM6 1919 aa9.54□□□□□ -0.88
SMPD3-210ENST00000567811 GRIN3BO60391 1043 aa9.53□□□□□ -0.88
SMPD3-210ENST00000567811 DCTN1Q14203 1278 aa9.53□□□□□ -0.88
SMPD3-210ENST00000567811 MCM10Q7L590 875 aa9.53□□□□□ -0.88
SMPD3-210ENST00000567811 FMNL2Q96PY5 1086 aa9.53□□□□□ -0.88
SMPD3-210ENST00000567811 PLEKHF1Q96S99 279 aa9.53□□□□□ -0.88
SMPD3-210ENST00000567811 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
SMPD3-210ENST00000567811 CEMIPQ8WUJ3 1361 aa9.52□□□□□ -0.88
SMPD3-210ENST00000567811 KCNQ3O43525 872 aa9.52□□□□□ -0.89
SMPD3-210ENST00000567811 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
SMPD3-210ENST00000567811 TM4SF1P30408 202 aa9.52□□□□□ -0.89
SMPD3-210ENST00000567811 TGFB2P61812 414 aa9.52□□□□□ -0.89
SMPD3-210ENST00000567811 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.89
SMPD3-210ENST00000567811 SIPA1L3O60292 1781 aaPredicted RBP9.52□□□□□ -0.89
SMPD3-210ENST00000567811 TJP1Q07157 1748 aa9.51□□□□□ -0.89
SMPD3-210ENST00000567811 A0A087WZG4 1122 aa9.51□□□□□ -0.89
SMPD3-210ENST00000567811 FKBP8Q14318 412 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms