RNA–Protein interactions for RNA: ENST00000567432.1

GINS3-208, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-208ENST00000567432 SERTAD1Q9UHV2 236 aa4.47□□□□□ -1.69
GINS3-208ENST00000567432 USTQ9Y2C2 406 aa4.47□□□□□ -1.69
GINS3-208ENST00000567432 TMEM88BA6NKF7 163 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 SPINT1O43278 529 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 FAM69CQ0P6D2 419 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 SCARF1Q14162 830 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 SWI5Q1ZZU3 235 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 C6orf118Q5T5N4 469 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 MRPL14Q6P1L8 145 aaKnown RBP4.46□□□□□ -1.7
GINS3-208ENST00000567432 LINC00528Q8N1L1 170 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 TSEN2Q8NCE0 465 aaKnown RBP4.46□□□□□ -1.7
GINS3-208ENST00000567432 CNKSR1Q969H4 720 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 NLRP3Q96P20 1036 aa4.46□□□□□ -1.7
GINS3-208ENST00000567432 ST8SIA5O15466 376 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 BMP2P12643 396 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 BMP1P13497 986 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 PDIA4P13667 645 aaKnown RBP4.45□□□□□ -1.7
GINS3-208ENST00000567432 SMTNP53814 917 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 CENPCQ03188 943 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 TRIM46Q7Z4K8 759 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 TNS4Q8IZW8 715 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 INSM2Q96T92 566 aaPredicted RBP4.45□□□□□ -1.7
GINS3-208ENST00000567432 HINFPQ9BQA5 517 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 TRAIPQ9BWF2 469 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 AAASQ9NRG9 546 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 HRH3Q9Y5N1 445 aa4.45□□□□□ -1.7
GINS3-208ENST00000567432 CARNS1A5YM72 827 aa4.44□□□□□ -1.7
GINS3-208ENST00000567432 A6NJY4 79 aa4.44□□□□□ -1.7
GINS3-208ENST00000567432 CDK2AP1O14519 115 aa4.44□□□□□ -1.7
GINS3-208ENST00000567432 GPC1P35052 558 aa4.44□□□□□ -1.7
GINS3-208ENST00000567432 RNF144AP50876 292 aaPredicted RBP4.44□□□□□ -1.7
GINS3-208ENST00000567432 EPHA4P54764 986 aa4.44□□□□□ -1.7
GINS3-208ENST00000567432 MTFR1Q15390 333 aa4.44□□□□□ -1.7
GINS3-208ENST00000567432 TLR1Q15399 786 aa4.44□□□□□ -1.7
GINS3-208ENST00000567432 CLP1Q92989 425 aaKnown RBP4.44□□□□□ -1.7
GINS3-208ENST00000567432 PURBQ96QR8 312 aaKnown RBP4.44□□□□□ -1.7
GINS3-208ENST00000567432 POLMQ9NP87 494 aaPredicted RBP4.44□□□□□ -1.7
GINS3-208ENST00000567432 SCHIP1Q9P0W5 487 aaPredicted RBP4.44□□□□□ -1.7
GINS3-208ENST00000567432 LGR5O75473 907 aa4.43□□□□□ -1.7
GINS3-208ENST00000567432 CTSOP43234 321 aaPredicted RBP4.43□□□□□ -1.7
GINS3-208ENST00000567432 FOXK2Q01167 660 aa4.43□□□□□ -1.7
GINS3-208ENST00000567432 SLC27A3Q5K4L6 730 aa4.43□□□□□ -1.7
GINS3-208ENST00000567432 ZFP42Q96MM3 310 aa4.43□□□□□ -1.7
GINS3-208ENST00000567432 ZSCAN10Q96SZ4 725 aaPredicted RBP4.43□□□□□ -1.7
GINS3-208ENST00000567432 FHDC1Q9C0D6 1143 aaPredicted RBP4.43□□□□□ -1.7
GINS3-208ENST00000567432 GRIP2Q9C0E4 1043 aa4.43□□□□□ -1.7
GINS3-208ENST00000567432 ATP13A2Q9NQ11 1180 aa4.43□□□□□ -1.7
GINS3-208ENST00000567432 TTLL8A6PVC2 850 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 PRMT3O60678 531 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 ATP2B4P23634 1241 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 GTF2E1P29083 439 aaPredicted RBP4.42□□□□□ -1.7
GINS3-208ENST00000567432 WEE1P30291 646 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 OCLNQ16625 522 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 FOXD4L5Q5VV16 416 aaPredicted RBP4.42□□□□□ -1.7
GINS3-208ENST00000567432 B4GALNT3Q6L9W6 998 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 TMEM214Q6NUQ4 689 aaKnown RBP4.42□□□□□ -1.7
GINS3-208ENST00000567432 Q6ZNB5 142 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 PPARGC1BQ86YN6 1023 aaKnown RBP4.42□□□□□ -1.7
GINS3-208ENST00000567432 GAS2L2Q8NHY3 880 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 SCG3Q8WXD2 468 aaKnown RBP4.42□□□□□ -1.7
GINS3-208ENST00000567432 PRIMPOLQ96LW4 560 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 TSPAN10Q9H1Z9 355 aaPredicted RBP4.42□□□□□ -1.7
GINS3-208ENST00000567432 SLAIN2Q9P270 581 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 DACH1Q9UI36 760 aa4.42□□□□□ -1.7
GINS3-208ENST00000567432 SOS2Q07890 1332 aaPredicted RBP4.42□□□□□ -1.7
GINS3-208ENST00000567432 ATAD2Q6PL18 1390 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 C21orf2O43822 256 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 IGFBP4P22692 258 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 GNASQ5JWF2 1037 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 TBCELQ5QJ74 424 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 LYSMD3Q7Z3D4 306 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 SLC9A9Q8IVB4 645 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 NBPF15Q8N660 670 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 RNF217Q8TC41 542 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 RHBDD1Q8TEB9 315 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 IQSEC3Q9UPP2 1182 aaPredicted RBP4.41□□□□□ -1.7
GINS3-208ENST00000567432 USP3Q9Y6I4 520 aa4.41□□□□□ -1.7
GINS3-208ENST00000567432 FIGNL2A6NMB9 653 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 SPATA31C2B4DYI2 1134 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 PPP1R12BO60237 982 aaPredicted RBP4.4□□□□□ -1.71
GINS3-208ENST00000567432 BRD1O95696 1058 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 SSFA2P28290 1259 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 PSMA6P60900 246 aaKnown RBP4.4□□□□□ -1.71
GINS3-208ENST00000567432 TEAD4Q15561 434 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 PHLDB3Q6NSJ2 640 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 PRICKLE2Q7Z3G6 844 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 STAG2Q8N3U4 1231 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 NIFKQ9BYG3 293 aaKnown RBP4.4□□□□□ -1.71
GINS3-208ENST00000567432 SENP2Q9HC62 589 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 CABP1Q9NZU7 370 aa4.4□□□□□ -1.71
GINS3-208ENST00000567432 CXXC1Q9P0U4 656 aaPredicted RBP4.4□□□□□ -1.71
GINS3-208ENST00000567432 LCE2BO14633 110 aa4.39□□□□□ -1.71
GINS3-208ENST00000567432 FOXO3O43524 673 aa4.39□□□□□ -1.71
GINS3-208ENST00000567432 MAN1A2O60476 641 aa4.39□□□□□ -1.71
GINS3-208ENST00000567432 NOS2P35228 1153 aa4.39□□□□□ -1.71
GINS3-208ENST00000567432 POU4F2Q12837 409 aa4.39□□□□□ -1.71
GINS3-208ENST00000567432 C4orf17Q53FE4 359 aa4.39□□□□□ -1.71
GINS3-208ENST00000567432 WDR44Q5JSH3 913 aa4.39□□□□□ -1.71
GINS3-208ENST00000567432 NBPF10Q6P3W6 841 aaKnown RBP4.39□□□□□ -1.71
GINS3-208ENST00000567432 TAS1R3Q7RTX0 852 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms