RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 ITPK1Q13572 414 aa13.66□□□□□ -0.22
HMGN2P40-201ENST00000566875 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
HMGN2P40-201ENST00000566875 DOT1LQ8TEK3 1739 aa13.66□□□□□ -0.22
HMGN2P40-201ENST00000566875 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
HMGN2P40-201ENST00000566875 KDRP35968 1356 aa13.66□□□□□ -0.22
HMGN2P40-201ENST00000566875 ANKRD26Q9UPS8 1709 aa13.65□□□□□ -0.22
HMGN2P40-201ENST00000566875 GNPATO15228 680 aa13.65□□□□□ -0.22
HMGN2P40-201ENST00000566875 PHF14O94880 888 aa13.65□□□□□ -0.22
HMGN2P40-201ENST00000566875 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
HMGN2P40-201ENST00000566875 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
HMGN2P40-201ENST00000566875 CD2APQ9Y5K6 639 aa13.65□□□□□ -0.22
HMGN2P40-201ENST00000566875 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
HMGN2P40-201ENST00000566875 PTCD1O75127 700 aaKnown RBP13.64□□□□□ -0.23
HMGN2P40-201ENST00000566875 CFAP53Q96M91 514 aa13.64□□□□□ -0.23
HMGN2P40-201ENST00000566875 LY75O60449 1722 aa13.64□□□□□ -0.23
HMGN2P40-201ENST00000566875 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
HMGN2P40-201ENST00000566875 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
HMGN2P40-201ENST00000566875 SLC4A9Q96Q91 983 aa13.63□□□□□ -0.23
HMGN2P40-201ENST00000566875 LGR6Q9HBX8 967 aa13.63□□□□□ -0.23
HMGN2P40-201ENST00000566875 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
HMGN2P40-201ENST00000566875 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
HMGN2P40-201ENST00000566875 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
HMGN2P40-201ENST00000566875 GRIN3BO60391 1043 aa13.62□□□□□ -0.23
HMGN2P40-201ENST00000566875 RPS6KA4O75676 772 aa13.62□□□□□ -0.23
HMGN2P40-201ENST00000566875 SMIM5Q71RC9 77 aa13.62□□□□□ -0.23
HMGN2P40-201ENST00000566875 AMIGO3Q86WK7 504 aa13.62□□□□□ -0.23
HMGN2P40-201ENST00000566875 SLC52A2Q9HAB3 445 aa13.62□□□□□ -0.23
HMGN2P40-201ENST00000566875 RFC4P35249 363 aa13.61□□□□□ -0.23
HMGN2P40-201ENST00000566875 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
HMGN2P40-201ENST00000566875 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
HMGN2P40-201ENST00000566875 NLGN2Q8NFZ4 835 aa13.6□□□□□ -0.23
HMGN2P40-201ENST00000566875 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
HMGN2P40-201ENST00000566875 ITGB4P16144 1822 aa13.6□□□□□ -0.23
HMGN2P40-201ENST00000566875 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
HMGN2P40-201ENST00000566875 CNTNAP4Q9C0A0 1308 aa13.59□□□□□ -0.23
HMGN2P40-201ENST00000566875 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
HMGN2P40-201ENST00000566875 PPP2R1AP30153 589 aa13.58□□□□□ -0.24
HMGN2P40-201ENST00000566875 UTRNP46939 3433 aa13.58□□□□□ -0.24
HMGN2P40-201ENST00000566875 QSER1Q2KHR3 1735 aa13.57□□□□□ -0.24
HMGN2P40-201ENST00000566875 FCHSD2O94868 740 aa13.57□□□□□ -0.24
HMGN2P40-201ENST00000566875 CRKLP46109 303 aaKnown RBP13.57□□□□□ -0.24
HMGN2P40-201ENST00000566875 MMP10P09238 476 aa13.56□□□□□ -0.24
HMGN2P40-201ENST00000566875 U2AF1L5P0DN76 240 aaPredicted RBP13.56□□□□□ -0.24
HMGN2P40-201ENST00000566875 U2AF1Q01081 240 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGN2P40-201ENST00000566875 TEFQ10587 303 aa13.56□□□□□ -0.24
HMGN2P40-201ENST00000566875 SLC39A6Q13433 755 aa13.56□□□□□ -0.24
HMGN2P40-201ENST00000566875 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
HMGN2P40-201ENST00000566875 IL17REQ8NFR9 667 aa13.56□□□□□ -0.24
HMGN2P40-201ENST00000566875 TOGARAM1Q9Y4F4 1720 aa13.56□□□□□ -0.24
HMGN2P40-201ENST00000566875 INTS5Q6P9B9 1019 aaKnown RBP13.55□□□□□ -0.24
HMGN2P40-201ENST00000566875 DNAJC10Q8IXB1 793 aa13.55□□□□□ -0.24
HMGN2P40-201ENST00000566875 TEX13AQ9BXU3 409 aaPredicted RBP13.55□□□□□ -0.24
HMGN2P40-201ENST00000566875 C4BP0C0L5 1744 aa13.55□□□□□ -0.24
HMGN2P40-201ENST00000566875 ZPR1O75312 459 aa13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 STARD3NLO95772 234 aa13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 GYS1P13807 737 aa13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 PRKAR2BP31323 418 aa13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 TGFB2P61812 414 aa13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 TTC5Q8N0Z6 440 aa13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 ZNF784Q8NCA9 323 aaPredicted RBP13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 PARP3Q9Y6F1 533 aa13.54□□□□□ -0.24
HMGN2P40-201ENST00000566875 C5P01031 1676 aa13.53□□□□□ -0.24
HMGN2P40-201ENST00000566875 YBX3P16989 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
HMGN2P40-201ENST00000566875 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
HMGN2P40-201ENST00000566875 CCDC87Q9NVE4 849 aa13.53□□□□□ -0.24
HMGN2P40-201ENST00000566875 NEFMP07197 916 aa13.52□□□□□ -0.25
HMGN2P40-201ENST00000566875 RTF1Q92541 710 aaKnown RBP13.52□□□□□ -0.25
HMGN2P40-201ENST00000566875 TAF1LQ8IZX4 1826 aa13.52□□□□□ -0.25
HMGN2P40-201ENST00000566875 COL24A1Q17RW2 1714 aa13.51□□□□□ -0.25
HMGN2P40-201ENST00000566875 HTATSF1O43719 755 aaKnown RBP13.51□□□□□ -0.25
HMGN2P40-201ENST00000566875 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
HMGN2P40-201ENST00000566875 PNNQ9H307 717 aaKnown RBP13.51□□□□□ -0.25
HMGN2P40-201ENST00000566875 GOLGB1Q14789 3259 aaKnown RBP13.51□□□□□ -0.25
HMGN2P40-201ENST00000566875 BTBD11A6QL63 1104 aa13.5□□□□□ -0.25
HMGN2P40-201ENST00000566875 USP42Q9H9J4 1324 aaKnown RBP13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 TUBGCP6Q96RT7 1819 aa13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 A0A087WZG4 1122 aa13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 TM4SF1P30408 202 aa13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 FKBP8Q14318 412 aa13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 ZNF496Q96IT1 587 aaPredicted RBP13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 SRP68Q9UHB9 627 aaKnown RBP13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 NARFQ9UHQ1 456 aa13.49□□□□□ -0.25
HMGN2P40-201ENST00000566875 A0A0G2JLW4 131 aa13.48□□□□□ -0.25
HMGN2P40-201ENST00000566875 CANXP27824 592 aaKnown RBP13.48□□□□□ -0.25
HMGN2P40-201ENST00000566875 RALBP1Q15311 655 aa13.48□□□□□ -0.25
HMGN2P40-201ENST00000566875 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
HMGN2P40-201ENST00000566875 UBR3Q6ZT12 1888 aa13.48□□□□□ -0.25
HMGN2P40-201ENST00000566875 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
HMGN2P40-201ENST00000566875 COL3A1P02461 1466 aaPredicted RBP13.47□□□□□ -0.25
HMGN2P40-201ENST00000566875 ZNF831Q5JPB2 1677 aa13.47□□□□□ -0.25
HMGN2P40-201ENST00000566875 EIF5P55010 431 aaKnown RBP13.46□□□□□ -0.25
HMGN2P40-201ENST00000566875 DDX10Q13206 875 aaKnown RBP13.46□□□□□ -0.25
HMGN2P40-201ENST00000566875 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.25
HMGN2P40-201ENST00000566875 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
HMGN2P40-201ENST00000566875 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
HMGN2P40-201ENST00000566875 DPEP1P16444 411 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms