RNA–Protein interactions for RNA: ENST00000566777.5

TCF4-235, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-235ENST00000566777 TERF2IPQ9NYB0 399 aa8.68□□□□□ -1.02
TCF4-235ENST00000566777 LTN1O94822 1766 aa8.68□□□□□ -1.02
TCF4-235ENST00000566777 BTAF1O14981 1849 aa8.67□□□□□ -1.02
TCF4-235ENST00000566777 ZNF827Q17R98 1081 aa8.67□□□□□ -1.02
TCF4-235ENST00000566777 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
TCF4-235ENST00000566777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.67□□□□□ -1.02
TCF4-235ENST00000566777 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
TCF4-235ENST00000566777 A0A1W2PP64 1363 aa8.66□□□□□ -1.02
TCF4-235ENST00000566777 TMC1Q8TDI8 760 aa8.66□□□□□ -1.02
TCF4-235ENST00000566777 TRIM35Q9UPQ4 493 aa8.66□□□□□ -1.02
TCF4-235ENST00000566777 LHX8Q68G74 356 aa8.65□□□□□ -1.02
TCF4-235ENST00000566777 TESK2Q96S53 571 aa8.65□□□□□ -1.02
TCF4-235ENST00000566777 QSER1Q2KHR3 1735 aa8.65□□□□□ -1.03
TCF4-235ENST00000566777 PNPLA7Q6ZV29 1317 aa8.64□□□□□ -1.03
TCF4-235ENST00000566777 HOXC9P31274 260 aa8.64□□□□□ -1.03
TCF4-235ENST00000566777 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
TCF4-235ENST00000566777 KCNV2Q8TDN2 545 aa8.64□□□□□ -1.03
TCF4-235ENST00000566777 FAM208AQ9UK61 1670 aaKnown RBP8.64□□□□□ -1.03
TCF4-235ENST00000566777 CHD4Q14839 1912 aa8.64□□□□□ -1.03
TCF4-235ENST00000566777 NSD2O96028 1365 aa8.63□□□□□ -1.03
TCF4-235ENST00000566777 ANKRD36BQ8N2N9 1353 aa8.63□□□□□ -1.03
TCF4-235ENST00000566777 MAP3K19Q56UN5 1328 aa8.63□□□□□ -1.03
TCF4-235ENST00000566777 PDE4AP27815 886 aa8.63□□□□□ -1.03
TCF4-235ENST00000566777 PRIM1P49642 420 aaKnown RBP8.63□□□□□ -1.03
TCF4-235ENST00000566777 COG3Q96JB2 828 aa8.63□□□□□ -1.03
TCF4-235ENST00000566777 ZCRB1Q8TBF4 217 aaKnown RBP8.62□□□□□ -1.03
TCF4-235ENST00000566777 TFCP2L1Q9NZI6 479 aa8.62□□□□□ -1.03
TCF4-235ENST00000566777 LY75O60449 1722 aa8.62□□□□□ -1.03
TCF4-235ENST00000566777 CGNL1Q0VF96 1302 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 ST20-MTHFSA0A0A6YYL1 179 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 FYB1O15117 783 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 POTEIP0CG38 1075 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 FBLN1P23142 703 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 POLD1P28340 1107 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 AMPHP49418 695 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 C1QTNF8P60827 252 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 E2F4Q16254 413 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 GPR162Q16538 588 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 NBPF6Q5VWK0 638 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 LTV1Q96GA3 475 aaPredicted RBP8.61□□□□□ -1.03
TCF4-235ENST00000566777 NBPF4Q96M43 638 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
TCF4-235ENST00000566777 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
TCF4-235ENST00000566777 SHANK3Q9BYB0 1731 aa8.6□□□□□ -1.03
TCF4-235ENST00000566777 ATN1P54259 1190 aaPredicted RBP8.6□□□□□ -1.03
TCF4-235ENST00000566777 KCNQ4P56696 695 aa8.6□□□□□ -1.03
TCF4-235ENST00000566777 KAT6BQ8WYB5 2073 aa8.6□□□□□ -1.03
TCF4-235ENST00000566777 TONSLQ96HA7 1378 aa8.6□□□□□ -1.03
TCF4-235ENST00000566777 MEGF6O75095 1541 aa8.59□□□□□ -1.03
TCF4-235ENST00000566777 TUBGCP6Q96RT7 1819 aa8.59□□□□□ -1.03
TCF4-235ENST00000566777 RGPD2P0DJD1 1756 aa8.59□□□□□ -1.03
TCF4-235ENST00000566777 HMGB2P26583 209 aaKnown RBP8.59□□□□□ -1.03
TCF4-235ENST00000566777 SYTL4Q96C24 671 aaPredicted RBP8.59□□□□□ -1.03
TCF4-235ENST00000566777 DOT1LQ8TEK3 1739 aa8.59□□□□□ -1.03
TCF4-235ENST00000566777 ATMINO43313 823 aaPredicted RBP8.58□□□□□ -1.04
TCF4-235ENST00000566777 ASTLQ6HA08 431 aaPredicted RBP8.58□□□□□ -1.04
TCF4-235ENST00000566777 COL23A1Q86Y22 540 aaPredicted RBP8.58□□□□□ -1.04
TCF4-235ENST00000566777 NLGN2Q8NFZ4 835 aa8.58□□□□□ -1.04
TCF4-235ENST00000566777 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
TCF4-235ENST00000566777 CRISPLD2Q9H0B8 497 aa8.58□□□□□ -1.04
TCF4-235ENST00000566777 CCNL1Q9UK58 526 aaPredicted RBP8.58□□□□□ -1.04
TCF4-235ENST00000566777 INSRP06213 1382 aa8.58□□□□□ -1.04
TCF4-235ENST00000566777 KIF24Q5T7B8 1368 aa8.58□□□□□ -1.04
TCF4-235ENST00000566777 USP47Q96K76 1375 aa8.58□□□□□ -1.04
TCF4-235ENST00000566777 GRIN3BO60391 1043 aa8.57□□□□□ -1.04
TCF4-235ENST00000566777 YBX3P16989 372 aaKnown RBP eCLIP8.57□□□□□ -1.04
TCF4-235ENST00000566777 MFSD10Q14728 455 aa8.57□□□□□ -1.04
TCF4-235ENST00000566777 RRS1Q15050 365 aaKnown RBP8.57□□□□□ -1.04
TCF4-235ENST00000566777 IER5LQ5T953 404 aa8.57□□□□□ -1.04
TCF4-235ENST00000566777 FLAD1Q8NFF5 587 aa8.57□□□□□ -1.04
TCF4-235ENST00000566777 RAPGEF4Q8WZA2 1011 aa8.57□□□□□ -1.04
TCF4-235ENST00000566777 DDX27Q96GQ7 796 aaKnown RBP8.57□□□□□ -1.04
TCF4-235ENST00000566777 TATP17735 454 aaPredicted RBP8.56□□□□□ -1.04
TCF4-235ENST00000566777 TMF1P82094 1093 aa8.56□□□□□ -1.04
TCF4-235ENST00000566777 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
TCF4-235ENST00000566777 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
TCF4-235ENST00000566777 CD2APQ9Y5K6 639 aa8.56□□□□□ -1.04
TCF4-235ENST00000566777 PCDH11XQ9BZA7 1347 aa8.55□□□□□ -1.04
TCF4-235ENST00000566777 PCDH11YQ9BZA8 1340 aa8.55□□□□□ -1.04
TCF4-235ENST00000566777 SMG6Q86US8 1419 aaKnown RBP8.55□□□□□ -1.04
TCF4-235ENST00000566777 SENP3-EIF4A1A0A087X0R7 540 aa8.55□□□□□ -1.04
TCF4-235ENST00000566777 CYP27B1O15528 508 aa8.55□□□□□ -1.04
TCF4-235ENST00000566777 HSP90AB2PQ58FF8 381 aa8.55□□□□□ -1.04
TCF4-235ENST00000566777 USHBP1Q8N6Y0 703 aa8.55□□□□□ -1.04
TCF4-235ENST00000566777 OCEL1Q9H607 264 aa8.55□□□□□ -1.04
TCF4-235ENST00000566777 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 C5P01031 1676 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 FLT4P35916 1363 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 PALLDQ8WX93 1383 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 G3V3G9 751 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
TCF4-235ENST00000566777 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 PELP1Q8IZL8 1130 aaKnown RBP8.54□□□□□ -1.04
TCF4-235ENST00000566777 PDCD7Q8N8D1 485 aaKnown RBP8.54□□□□□ -1.04
TCF4-235ENST00000566777 SMARCC1Q92922 1105 aaPredicted RBP8.54□□□□□ -1.04
TCF4-235ENST00000566777 DCBLD2Q96PD2 775 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 CARD14Q9BXL6 1004 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 TIMELESSQ9UNS1 1208 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 TAF1LQ8IZX4 1826 aa8.54□□□□□ -1.04
TCF4-235ENST00000566777 TULP1O00294 542 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms