RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 RGS12O14924 1447 aa20.81■□□□□ 0.92
CMTM3-213ENST00000566756 ANKRD44Q8N8A2 993 aa20.8■□□□□ 0.92
CMTM3-213ENST00000566756 SOS2Q07890 1332 aaPredicted RBP20.8■□□□□ 0.92
CMTM3-213ENST00000566756 COL18A1P39060 1754 aa20.8■□□□□ 0.92
CMTM3-213ENST00000566756 ATP10DQ9P241 1426 aa20.79■□□□□ 0.92
CMTM3-213ENST00000566756 DCTN1Q14203 1278 aa20.79■□□□□ 0.92
CMTM3-213ENST00000566756 NBPF6Q5VWK0 638 aa20.79■□□□□ 0.92
CMTM3-213ENST00000566756 SPRYD3Q8NCJ5 442 aa20.79■□□□□ 0.92
CMTM3-213ENST00000566756 NBPF4Q96M43 638 aa20.79■□□□□ 0.92
CMTM3-213ENST00000566756 TRAK2O60296 914 aa20.79■□□□□ 0.92
CMTM3-213ENST00000566756 LRRC37A3O60309 1634 aa20.78■□□□□ 0.92
CMTM3-213ENST00000566756 CRB1P82279 1406 aa20.78■□□□□ 0.92
CMTM3-213ENST00000566756 GOLGA6L3A6NEY3 463 aa20.78■□□□□ 0.92
CMTM3-213ENST00000566756 NHSL1Q5SYE7 1610 aa20.78■□□□□ 0.92
CMTM3-213ENST00000566756 HSP90AB1P08238 724 aaKnown RBP20.77■□□□□ 0.92
CMTM3-213ENST00000566756 PLEKHM2Q8IWE5 1019 aa20.77■□□□□ 0.92
CMTM3-213ENST00000566756 RTF1Q92541 710 aaKnown RBP20.77■□□□□ 0.92
CMTM3-213ENST00000566756 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
CMTM3-213ENST00000566756 RAB3GAP1Q15042 981 aa20.76■□□□□ 0.91
CMTM3-213ENST00000566756 ZBTB7CA1YPR0 619 aa20.76■□□□□ 0.91
CMTM3-213ENST00000566756 K7ELQ4 463 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-213ENST00000566756 MCM10Q7L590 875 aa20.76■□□□□ 0.91
CMTM3-213ENST00000566756 ANKRD24Q8TF21 1146 aa20.76■□□□□ 0.91
CMTM3-213ENST00000566756 GBP4Q96PP9 640 aa20.76■□□□□ 0.91
CMTM3-213ENST00000566756 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
CMTM3-213ENST00000566756 TTC22Q5TAA0 569 aa20.75■□□□□ 0.91
CMTM3-213ENST00000566756 AXIN2Q9Y2T1 843 aa20.75■□□□□ 0.91
CMTM3-213ENST00000566756 CPDO75976 1380 aa20.75■□□□□ 0.91
CMTM3-213ENST00000566756 FAM208AQ9UK61 1670 aaKnown RBP20.75■□□□□ 0.91
CMTM3-213ENST00000566756 MAP3K5Q99683 1374 aa20.74■□□□□ 0.91
CMTM3-213ENST00000566756 GSPT1P15170 499 aaKnown RBP20.74■□□□□ 0.91
CMTM3-213ENST00000566756 ZC3H6P61129 1189 aaKnown RBP20.74■□□□□ 0.91
CMTM3-213ENST00000566756 ERBB3P21860 1342 aa20.73■□□□□ 0.91
CMTM3-213ENST00000566756 SKOR2Q2VWA4 1001 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-213ENST00000566756 USHBP1Q8N6Y0 703 aa20.73■□□□□ 0.91
CMTM3-213ENST00000566756 CEP85Q6P2H3 762 aa20.72■□□□□ 0.91
CMTM3-213ENST00000566756 CLEC17AQ6ZS10 378 aa20.72■□□□□ 0.91
CMTM3-213ENST00000566756 LRRC59Q96AG4 307 aaKnown RBP20.72■□□□□ 0.91
CMTM3-213ENST00000566756 TNPO1Q92973 898 aaKnown RBP20.72■□□□□ 0.91
CMTM3-213ENST00000566756 RABEP1Q15276 862 aa20.71■□□□□ 0.91
CMTM3-213ENST00000566756 XRCC6P12956 609 aaKnown RBP eCLIP20.7■□□□□ 0.9
CMTM3-213ENST00000566756 MRE11P49959 708 aa20.7■□□□□ 0.9
CMTM3-213ENST00000566756 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.9
CMTM3-213ENST00000566756 PLEKHG5O94827 1062 aa20.7■□□□□ 0.9
CMTM3-213ENST00000566756 AMOTQ4VCS5 1084 aa20.7■□□□□ 0.9
CMTM3-213ENST00000566756 LTBP4Q8N2S1 1624 aa20.7■□□□□ 0.9
CMTM3-213ENST00000566756 PLEKHG2Q9H7P9 1386 aa20.69■□□□□ 0.9
CMTM3-213ENST00000566756 CABLES1Q8TDN4 633 aa20.69■□□□□ 0.9
CMTM3-213ENST00000566756 ABCA3Q99758 1704 aa20.69■□□□□ 0.9
CMTM3-213ENST00000566756 PLEKHO1Q53GL0 409 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-213ENST00000566756 HMMRO75330 724 aa20.68■□□□□ 0.9
CMTM3-213ENST00000566756 HSP90AA1P07900 732 aaKnown RBP20.67■□□□□ 0.9
CMTM3-213ENST00000566756 CASC1Q6TDU7 716 aa20.67■□□□□ 0.9
CMTM3-213ENST00000566756 IL17REQ8NFR9 667 aa20.67■□□□□ 0.9
CMTM3-213ENST00000566756 CEMIPQ8WUJ3 1361 aa20.67■□□□□ 0.9
CMTM3-213ENST00000566756 SOS1Q07889 1333 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-213ENST00000566756 CCT4P50991 539 aaKnown RBP20.66■□□□□ 0.9
CMTM3-213ENST00000566756 CD2BP2O95400 341 aaKnown RBP20.66■□□□□ 0.9
CMTM3-213ENST00000566756 USP26Q9BXU7 913 aa20.66■□□□□ 0.9
CMTM3-213ENST00000566756 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
CMTM3-213ENST00000566756 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
CMTM3-213ENST00000566756 OSBPL3Q9H4L5 887 aa20.65■□□□□ 0.9
CMTM3-213ENST00000566756 TSPYL4Q9UJ04 414 aa20.65■□□□□ 0.9
CMTM3-213ENST00000566756 OVOS2A0A0G2JMS6 1433 aa20.64■□□□□ 0.89
CMTM3-213ENST00000566756 SLC4A2P04920 1241 aa20.63■□□□□ 0.89
CMTM3-213ENST00000566756 TAF7Q15545 349 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-213ENST00000566756 MEIS3Q99687 375 aa20.63■□□□□ 0.89
CMTM3-213ENST00000566756 GZF1Q9H116 711 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-213ENST00000566756 CACNA1FO60840 1977 aa20.63■□□□□ 0.89
CMTM3-213ENST00000566756 ADAMTS7Q9UKP4 1686 aa20.62■□□□□ 0.89
CMTM3-213ENST00000566756 ROBO1Q9Y6N7 1651 aa20.61■□□□□ 0.89
CMTM3-213ENST00000566756 GOLGA6L22H0YM25 854 aa20.61■□□□□ 0.89
CMTM3-213ENST00000566756 REC8O95072 547 aa20.61■□□□□ 0.89
CMTM3-213ENST00000566756 SDSP20132 328 aa20.61■□□□□ 0.89
CMTM3-213ENST00000566756 RBM42Q9BTD8 480 aaKnown RBP20.61■□□□□ 0.89
CMTM3-213ENST00000566756 N4BP2Q86UW6 1770 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-213ENST00000566756 AHDC1Q5TGY3 1603 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-213ENST00000566756 ZNF530Q6P9A1 599 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-213ENST00000566756 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-213ENST00000566756 GRPEL1Q9HAV7 217 aa20.61■□□□□ 0.89
CMTM3-213ENST00000566756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.61■□□□□ 0.89
CMTM3-213ENST00000566756 IBTKQ9P2D0 1353 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-213ENST00000566756 NUCB2P80303 420 aa20.6■□□□□ 0.89
CMTM3-213ENST00000566756 CHRNA2Q15822 529 aa20.6■□□□□ 0.89
CMTM3-213ENST00000566756 KDM3BQ7LBC6 1761 aa20.6■□□□□ 0.89
CMTM3-213ENST00000566756 CWC22Q9HCG8 908 aaKnown RBP20.59■□□□□ 0.89
CMTM3-213ENST00000566756 NLRP2Q9NX02 1062 aa20.59■□□□□ 0.89
CMTM3-213ENST00000566756 MIS18AQ9NYP9 233 aa20.59■□□□□ 0.89
CMTM3-213ENST00000566756 C1orf141Q5JVX7 400 aa20.59■□□□□ 0.89
CMTM3-213ENST00000566756 RAPGEF4Q8WZA2 1011 aa20.59■□□□□ 0.89
CMTM3-213ENST00000566756 PRDM11Q9NQV5 511 aa20.58■□□□□ 0.89
CMTM3-213ENST00000566756 PXDNLA1KZ92 1463 aa20.57■□□□□ 0.88
CMTM3-213ENST00000566756 PKD1L3Q7Z443 1732 aa20.57■□□□□ 0.88
CMTM3-213ENST00000566756 ST18O60284 1047 aa20.57■□□□□ 0.88
CMTM3-213ENST00000566756 GNAI2P04899 355 aa20.57■□□□□ 0.88
CMTM3-213ENST00000566756 CSB-PGBD3P0DP91 1061 aa20.57■□□□□ 0.88
CMTM3-213ENST00000566756 OTUD7AQ8TE49 926 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-213ENST00000566756 STK31Q9BXU1 1019 aa20.57■□□□□ 0.88
CMTM3-213ENST00000566756 SIPA1L3O60292 1781 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-213ENST00000566756 ERC2O15083 957 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms