RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ANKRD24Q8TF21 1146 aa23.2■■□□□ 1.3
MSLN-207ENST00000566549 KIF2CQ99661 725 aa23.2■■□□□ 1.3
MSLN-207ENST00000566549 CEMIPQ8WUJ3 1361 aa23.2■■□□□ 1.3
MSLN-207ENST00000566549 TEFQ10587 303 aa23.19■■□□□ 1.3
MSLN-207ENST00000566549 RBM42Q9BTD8 480 aaKnown RBP23.19■■□□□ 1.3
MSLN-207ENST00000566549 BABAM1Q9NWV8 329 aa23.19■■□□□ 1.3
MSLN-207ENST00000566549 AXIN2Q9Y2T1 843 aa23.19■■□□□ 1.3
MSLN-207ENST00000566549 PNMA6EA0A0J9YXQ4 647 aa23.18■■□□□ 1.3
MSLN-207ENST00000566549 FAM208AQ9UK61 1670 aaKnown RBP23.18■■□□□ 1.3
MSLN-207ENST00000566549 SDSP20132 328 aa23.18■■□□□ 1.3
MSLN-207ENST00000566549 EIF4A1P60842 406 aaKnown RBP23.18■■□□□ 1.3
MSLN-207ENST00000566549 TSHZ3Q63HK5 1081 aa23.17■■□□□ 1.3
MSLN-207ENST00000566549 DDX17Q92841 729 aaKnown RBP23.17■■□□□ 1.3
MSLN-207ENST00000566549 BTBD11A6QL63 1104 aa23.17■■□□□ 1.3
MSLN-207ENST00000566549 ANXA1P04083 346 aa23.17■■□□□ 1.3
MSLN-207ENST00000566549 GNAI3P08754 354 aa23.17■■□□□ 1.3
MSLN-207ENST00000566549 ZC3H6P61129 1189 aaKnown RBP23.17■■□□□ 1.3
MSLN-207ENST00000566549 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
MSLN-207ENST00000566549 LRRFIP2Q9Y608 721 aaKnown RBP23.17■■□□□ 1.3
MSLN-207ENST00000566549 CD2BP2O95400 341 aaKnown RBP23.16■■□□□ 1.3
MSLN-207ENST00000566549 AKAP4Q5JQC9 854 aa23.16■■□□□ 1.3
MSLN-207ENST00000566549 CHPF2Q9P2E5 772 aa23.16■■□□□ 1.3
MSLN-207ENST00000566549 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.3
MSLN-207ENST00000566549 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
MSLN-207ENST00000566549 C1orf141Q5JVX7 400 aa23.14■■□□□ 1.29
MSLN-207ENST00000566549 PXDNQ92626 1479 aa23.14■■□□□ 1.29
MSLN-207ENST00000566549 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.29
MSLN-207ENST00000566549 USP44Q9H0E7 712 aa23.13■■□□□ 1.29
MSLN-207ENST00000566549 FOXD4L1Q9NU39 408 aa23.13■■□□□ 1.29
MSLN-207ENST00000566549 SNX21Q969T3 373 aa23.13■■□□□ 1.29
MSLN-207ENST00000566549 C19orf44Q9H6X5 657 aa23.13■■□□□ 1.29
MSLN-207ENST00000566549 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
MSLN-207ENST00000566549 CHMP5Q9NZZ3 219 aa23.12■■□□□ 1.29
MSLN-207ENST00000566549 UBTFL1P0CB47 393 aaPredicted RBP23.12■■□□□ 1.29
MSLN-207ENST00000566549 ATP8B2P98198 1209 aa23.11■■□□□ 1.29
MSLN-207ENST00000566549 PDE1AP54750 535 aa23.11■■□□□ 1.29
MSLN-207ENST00000566549 AMOTQ4VCS5 1084 aa23.11■■□□□ 1.29
MSLN-207ENST00000566549 RNMTO43148 476 aaKnown RBP23.1■■□□□ 1.29
MSLN-207ENST00000566549 LRRCC1Q9C099 1032 aa23.1■■□□□ 1.29
MSLN-207ENST00000566549 SLIT3O75094 1523 aa23.1■■□□□ 1.29
MSLN-207ENST00000566549 SRCIN1Q9C0H9 1055 aa23.09■■□□□ 1.29
MSLN-207ENST00000566549 PI4KAP2A4QPH2 592 aa23.09■■□□□ 1.29
MSLN-207ENST00000566549 PI4KAP1Q8N8J0 262 aa23.09■■□□□ 1.29
MSLN-207ENST00000566549 MED1Q15648 1581 aaPredicted RBP23.08■■□□□ 1.29
MSLN-207ENST00000566549 HSP90AA1P07900 732 aaKnown RBP23.08■■□□□ 1.29
MSLN-207ENST00000566549 CASC1Q6TDU7 716 aa23.08■■□□□ 1.29
MSLN-207ENST00000566549 PRAMEF22A3QJZ6 481 aa23.08■■□□□ 1.28
MSLN-207ENST00000566549 ATF3P18847 181 aa23.08■■□□□ 1.28
MSLN-207ENST00000566549 USP26Q9BXU7 913 aa23.07■■□□□ 1.28
MSLN-207ENST00000566549 TMEM94Q12767 1356 aa23.06■■□□□ 1.28
MSLN-207ENST00000566549 NBPF7P0C2Y1 421 aaPredicted RBP23.06■■□□□ 1.28
MSLN-207ENST00000566549 CABLES1Q8TDN4 633 aa23.06■■□□□ 1.28
MSLN-207ENST00000566549 ERBB3P21860 1342 aa23.05■■□□□ 1.28
MSLN-207ENST00000566549 DNAAF4Q8WXU2 420 aa23.05■■□□□ 1.28
MSLN-207ENST00000566549 IL1RAPL2Q9NP60 686 aa23.05■■□□□ 1.28
MSLN-207ENST00000566549 NLRP2Q9NX02 1062 aa23.05■■□□□ 1.28
MSLN-207ENST00000566549 PHRF1Q9P1Y6 1649 aaKnown RBP23.05■■□□□ 1.28
MSLN-207ENST00000566549 NCOA3Q9Y6Q9 1424 aa23.05■■□□□ 1.28
MSLN-207ENST00000566549 IBTKQ9P2D0 1353 aaPredicted RBP23.05■■□□□ 1.28
MSLN-207ENST00000566549 K7ELQ4 463 aaPredicted RBP23.04■■□□□ 1.28
MSLN-207ENST00000566549 HOXB7P09629 217 aa23.04■■□□□ 1.28
MSLN-207ENST00000566549 MX1P20591 662 aa23.04■■□□□ 1.28
MSLN-207ENST00000566549 MCM4P33991 863 aa23.04■■□□□ 1.28
MSLN-207ENST00000566549 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
MSLN-207ENST00000566549 PROSER3Q2NL68 480 aa23.04■■□□□ 1.28
MSLN-207ENST00000566549 PPP1R42Q7Z4L9 355 aa23.04■■□□□ 1.28
MSLN-207ENST00000566549 OSBPL3Q9H4L5 887 aa23.04■■□□□ 1.28
MSLN-207ENST00000566549 BEND3Q5T5X7 828 aa23.03■■□□□ 1.28
MSLN-207ENST00000566549 TRPM3Q9HCF6 1732 aaPredicted RBP23.03■■□□□ 1.28
MSLN-207ENST00000566549 DDIT3P35638 169 aa23.02■■□□□ 1.28
MSLN-207ENST00000566549 SALL3Q9BXA9 1300 aa23.01■■□□□ 1.27
MSLN-207ENST00000566549 NCAPD2Q15021 1401 aa23.01■■□□□ 1.27
MSLN-207ENST00000566549 SRGAP3O43295 1099 aa23.01■■□□□ 1.27
MSLN-207ENST00000566549 RILPL2Q969X0 211 aa23.01■■□□□ 1.27
MSLN-207ENST00000566549 LMO7Q8WWI1 1683 aa23.01■■□□□ 1.27
MSLN-207ENST00000566549 TRIM6-TRIM34B2RNG4 842 aa23.01■■□□□ 1.27
MSLN-207ENST00000566549 GIGYF1O75420 1035 aaPredicted RBP23.01■■□□□ 1.27
MSLN-207ENST00000566549 SURF6O75683 361 aaKnown RBP23.01■■□□□ 1.27
MSLN-207ENST00000566549 KDM3BQ7LBC6 1761 aa23■■□□□ 1.27
MSLN-207ENST00000566549 DBF4Q9UBU7 674 aaPredicted RBP23■■□□□ 1.27
MSLN-207ENST00000566549 ADCY9O60503 1353 aa23■■□□□ 1.27
MSLN-207ENST00000566549 HSPA2P54652 639 aa23■■□□□ 1.27
MSLN-207ENST00000566549 CHRNA2Q15822 529 aa23■■□□□ 1.27
MSLN-207ENST00000566549 NUTM1Q86Y26 1132 aa23■■□□□ 1.27
MSLN-207ENST00000566549 SSH3Q8TE77 659 aa23■■□□□ 1.27
MSLN-207ENST00000566549 RAPGEF4Q8WZA2 1011 aa23■■□□□ 1.27
MSLN-207ENST00000566549 MST1RQ04912 1400 aa22.99■■□□□ 1.27
MSLN-207ENST00000566549 ERC2O15083 957 aa22.99■■□□□ 1.27
MSLN-207ENST00000566549 EIF5BO60841 1220 aaKnown RBP22.99■■□□□ 1.27
MSLN-207ENST00000566549 CSB-PGBD3P0DP91 1061 aa22.99■■□□□ 1.27
MSLN-207ENST00000566549 RABEP1Q15276 862 aa22.99■■□□□ 1.27
MSLN-207ENST00000566549 REC8O95072 547 aa22.99■■□□□ 1.27
MSLN-207ENST00000566549 SLC39A6Q13433 755 aa22.99■■□□□ 1.27
MSLN-207ENST00000566549 MAP3K2Q9Y2U5 619 aa22.98■■□□□ 1.27
MSLN-207ENST00000566549 GZF1Q9H116 711 aaPredicted RBP22.98■■□□□ 1.27
MSLN-207ENST00000566549 CHMP4AQ9BY43 222 aa22.97■■□□□ 1.27
MSLN-207ENST00000566549 BRPF3Q9ULD4 1205 aa22.97■■□□□ 1.27
MSLN-207ENST00000566549 AIMP1Q12904 312 aaKnown RBP22.97■■□□□ 1.27
MSLN-207ENST00000566549 UNC5CLQ8IV45 518 aa22.97■■□□□ 1.27
MSLN-207ENST00000566549 TNPO1Q92973 898 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms