RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 LINC00116Q8NCU8 138 aa25.5■■□□□ 1.67
CPNE7-208ENST00000566398 ITPK1Q13572 414 aa25.49■■□□□ 1.67
CPNE7-208ENST00000566398 MTHFSDQ2M296 383 aaKnown RBP25.49■■□□□ 1.67
CPNE7-208ENST00000566398 C4BP0C0L5 1744 aa25.49■■□□□ 1.67
CPNE7-208ENST00000566398 NFATC2IPQ8NCF5 419 aa25.48■■□□□ 1.67
CPNE7-208ENST00000566398 FHDC1Q9C0D6 1143 aaPredicted RBP25.48■■□□□ 1.67
CPNE7-208ENST00000566398 NUDCQ9Y266 331 aa25.48■■□□□ 1.67
CPNE7-208ENST00000566398 TUBGCP6Q96RT7 1819 aa25.47■■□□□ 1.67
CPNE7-208ENST00000566398 RBM42Q9BTD8 480 aaKnown RBP25.47■■□□□ 1.67
CPNE7-208ENST00000566398 PHF14O94880 888 aa25.45■■□□□ 1.66
CPNE7-208ENST00000566398 SLC52A2Q9HAB3 445 aa25.45■■□□□ 1.66
CPNE7-208ENST00000566398 RNMTO43148 476 aaKnown RBP25.44■■□□□ 1.66
CPNE7-208ENST00000566398 SSFA2P28290 1259 aa25.44■■□□□ 1.66
CPNE7-208ENST00000566398 AMIGO3Q86WK7 504 aa25.44■■□□□ 1.66
CPNE7-208ENST00000566398 GAS2L2Q8NHY3 880 aa25.44■■□□□ 1.66
CPNE7-208ENST00000566398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.43■■□□□ 1.66
CPNE7-208ENST00000566398 DCAF8L1A6NGE4 600 aa25.43■■□□□ 1.66
CPNE7-208ENST00000566398 GNPATO15228 680 aa25.43■■□□□ 1.66
CPNE7-208ENST00000566398 SLC4A9Q96Q91 983 aa25.43■■□□□ 1.66
CPNE7-208ENST00000566398 SYT17Q9BSW7 474 aa25.43■■□□□ 1.66
CPNE7-208ENST00000566398 LGR6Q9HBX8 967 aa25.43■■□□□ 1.66
CPNE7-208ENST00000566398 MAP3K5Q99683 1374 aa25.43■■□□□ 1.66
CPNE7-208ENST00000566398 TAF1LQ8IZX4 1826 aa25.42■■□□□ 1.66
CPNE7-208ENST00000566398 MRC1P22897 1456 aa25.42■■□□□ 1.66
CPNE7-208ENST00000566398 PTCD1O75127 700 aaKnown RBP25.42■■□□□ 1.66
CPNE7-208ENST00000566398 MSL1Q68DK7 614 aa25.42■■□□□ 1.66
CPNE7-208ENST00000566398 U2AF1L5P0DN76 240 aaPredicted RBP25.41■■□□□ 1.66
CPNE7-208ENST00000566398 PRKAR2BP31323 418 aa25.41■■□□□ 1.66
CPNE7-208ENST00000566398 U2AF1Q01081 240 aaKnown RBP eCLIP25.41■■□□□ 1.66
CPNE7-208ENST00000566398 RSPH6AQ9H0K4 717 aa25.41■■□□□ 1.66
CPNE7-208ENST00000566398 SMIM5Q71RC9 77 aa25.39■■□□□ 1.66
CPNE7-208ENST00000566398 KLHL34Q8N239 644 aa25.39■■□□□ 1.66
CPNE7-208ENST00000566398 CNTNAP4Q9C0A0 1308 aa25.37■■□□□ 1.65
CPNE7-208ENST00000566398 ZNF831Q5JPB2 1677 aa25.37■■□□□ 1.65
CPNE7-208ENST00000566398 GNAT3A8MTJ3 354 aa25.37■■□□□ 1.65
CPNE7-208ENST00000566398 RTCBQ9Y3I0 505 aaKnown RBP25.37■■□□□ 1.65
CPNE7-208ENST00000566398 SCN11AQ9UI33 1791 aa25.36■■□□□ 1.65
CPNE7-208ENST00000566398 DDX10Q13206 875 aaKnown RBP25.36■■□□□ 1.65
CPNE7-208ENST00000566398 RC3H1Q5TC82 1133 aaKnown RBP25.36■■□□□ 1.65
CPNE7-208ENST00000566398 COL24A1Q17RW2 1714 aa25.35■■□□□ 1.65
CPNE7-208ENST00000566398 PHACTR3Q96KR7 559 aa25.35■■□□□ 1.65
CPNE7-208ENST00000566398 ADAMTS7Q9UKP4 1686 aa25.34■■□□□ 1.65
CPNE7-208ENST00000566398 FCHSD2O94868 740 aa25.34■■□□□ 1.65
CPNE7-208ENST00000566398 ADRA2BP18089 450 aa25.33■■□□□ 1.65
CPNE7-208ENST00000566398 TEFQ10587 303 aa25.33■■□□□ 1.65
CPNE7-208ENST00000566398 SLC39A6Q13433 755 aa25.33■■□□□ 1.65
CPNE7-208ENST00000566398 UBR3Q6ZT12 1888 aa25.33■■□□□ 1.65
CPNE7-208ENST00000566398 RALBP1Q15311 655 aa25.32■■□□□ 1.64
CPNE7-208ENST00000566398 TRAPPC3LQ5T215 181 aa25.32■■□□□ 1.64
CPNE7-208ENST00000566398 CRKLP46109 303 aaKnown RBP25.31■■□□□ 1.64
CPNE7-208ENST00000566398 IL17REQ8NFR9 667 aa25.31■■□□□ 1.64
CPNE7-208ENST00000566398 RPS6KA4O75676 772 aa25.3■■□□□ 1.64
CPNE7-208ENST00000566398 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
CPNE7-208ENST00000566398 TTC5Q8N0Z6 440 aa25.29■■□□□ 1.64
CPNE7-208ENST00000566398 COL5A3P25940 1745 aaPredicted RBP25.29■■□□□ 1.64
CPNE7-208ENST00000566398 KCPQ6ZWJ8 1503 aa25.28■■□□□ 1.64
CPNE7-208ENST00000566398 DNAJC10Q8IXB1 793 aa25.28■■□□□ 1.64
CPNE7-208ENST00000566398 CEMIPQ8WUJ3 1361 aa25.28■■□□□ 1.64
CPNE7-208ENST00000566398 CICQ96RK0 1608 aaPredicted RBP25.27■■□□□ 1.64
CPNE7-208ENST00000566398 NLGN2Q8NFZ4 835 aa25.27■■□□□ 1.64
CPNE7-208ENST00000566398 ARHGEF1Q92888 912 aaKnown RBP25.27■■□□□ 1.64
CPNE7-208ENST00000566398 NEFMP07197 916 aa25.26■■□□□ 1.63
CPNE7-208ENST00000566398 RFC4P35249 363 aa25.26■■□□□ 1.63
CPNE7-208ENST00000566398 VSIG10Q8N0Z9 540 aa25.26■■□□□ 1.63
CPNE7-208ENST00000566398 RTF1Q92541 710 aaKnown RBP25.26■■□□□ 1.63
CPNE7-208ENST00000566398 TJP1Q07157 1748 aa25.25■■□□□ 1.63
CPNE7-208ENST00000566398 INTS5Q6P9B9 1019 aaKnown RBP25.24■■□□□ 1.63
CPNE7-208ENST00000566398 CCDC87Q9NVE4 849 aa25.24■■□□□ 1.63
CPNE7-208ENST00000566398 CD2APQ9Y5K6 639 aa25.24■■□□□ 1.63
CPNE7-208ENST00000566398 CYP19A1P11511 503 aaPredicted RBP25.23■■□□□ 1.63
CPNE7-208ENST00000566398 ZNF790Q6PG37 636 aa25.23■■□□□ 1.63
CPNE7-208ENST00000566398 NLGN1Q8N2Q7 840 aa25.23■■□□□ 1.63
CPNE7-208ENST00000566398 MYBBP1AQ9BQG0 1328 aaKnown RBP25.22■■□□□ 1.63
CPNE7-208ENST00000566398 MMP10P09238 476 aa25.22■■□□□ 1.63
CPNE7-208ENST00000566398 GPR162Q16538 588 aa25.22■■□□□ 1.63
CPNE7-208ENST00000566398 UTRNP46939 3433 aa25.22■■□□□ 1.63
CPNE7-208ENST00000566398 YY1P25490 414 aa25.21■■□□□ 1.63
CPNE7-208ENST00000566398 PELP1Q8IZL8 1130 aaKnown RBP25.21■■□□□ 1.63
CPNE7-208ENST00000566398 BTBD11A6QL63 1104 aa25.2■■□□□ 1.62
CPNE7-208ENST00000566398 HTATSF1O43719 755 aaKnown RBP25.2■■□□□ 1.62
CPNE7-208ENST00000566398 GYS1P13807 737 aa25.2■■□□□ 1.62
CPNE7-208ENST00000566398 MCM10Q7L590 875 aa25.2■■□□□ 1.62
CPNE7-208ENST00000566398 ZNF496Q96IT1 587 aaPredicted RBP25.2■■□□□ 1.62
CPNE7-208ENST00000566398 PNNQ9H307 717 aaKnown RBP25.2■■□□□ 1.62
CPNE7-208ENST00000566398 SOS1Q07889 1333 aaPredicted RBP25.19■■□□□ 1.62
CPNE7-208ENST00000566398 HEG1Q9ULI3 1381 aa25.18■■□□□ 1.62
CPNE7-208ENST00000566398 USP42Q9H9J4 1324 aaKnown RBP25.18■■□□□ 1.62
CPNE7-208ENST00000566398 GOLGB1Q14789 3259 aaKnown RBP25.18■■□□□ 1.62
CPNE7-208ENST00000566398 STARD3NLO95772 234 aa25.18■■□□□ 1.62
CPNE7-208ENST00000566398 FMNL2Q96PY5 1086 aa25.18■■□□□ 1.62
CPNE7-208ENST00000566398 MAPK8IP3Q9UPT6 1336 aa25.17■■□□□ 1.62
CPNE7-208ENST00000566398 PLEKHF1Q96S99 279 aa25.17■■□□□ 1.62
CPNE7-208ENST00000566398 SRP68Q9UHB9 627 aaKnown RBP25.17■■□□□ 1.62
CPNE7-208ENST00000566398 ZBTB1Q9Y2K1 713 aa25.17■■□□□ 1.62
CPNE7-208ENST00000566398 UBR2Q8IWV8 1755 aa25.16■■□□□ 1.62
CPNE7-208ENST00000566398 DCTN1Q14203 1278 aa25.16■■□□□ 1.62
CPNE7-208ENST00000566398 TEX13AQ9BXU3 409 aaPredicted RBP25.16■■□□□ 1.62
CPNE7-208ENST00000566398 MYH14Q7Z406 1995 aaKnown RBP25.16■■□□□ 1.62
CPNE7-208ENST00000566398 VIRMAQ69YN4 1812 aaKnown RBP25.15■■□□□ 1.62
CPNE7-208ENST00000566398 COL15A1P39059 1388 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms