RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 RLBP1P12271 317 aa11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 ZNF530Q6P9A1 599 aaPredicted RBP11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 FTSJ3Q8IY81 847 aaKnown RBP11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 PANK1Q8TE04 598 aa11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 RAPGEF4Q8WZA2 1011 aa11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 TSPYL4Q9UJ04 414 aa11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 ABCC4O15439 1325 aa11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 PTPRCP08575 1304 aa11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 MRC1P22897 1456 aa11.31□□□□□ -0.6
LSM3P5-201ENST00000566307 ZBTB7CA1YPR0 619 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 RNMTO43148 476 aaKnown RBP11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 TATP17735 454 aaPredicted RBP11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 C1orf141Q5JVX7 400 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 PRDM11Q9NQV5 511 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 COL14A1Q05707 1796 aaKnown RBP11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 VIRMAQ69YN4 1812 aaKnown RBP11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 MEGF6O75095 1541 aa11.3□□□□□ -0.6
LSM3P5-201ENST00000566307 COL16A1Q07092 1604 aaPredicted RBP11.29□□□□□ -0.6
LSM3P5-201ENST00000566307 CARD10Q9BWT7 1032 aa11.29□□□□□ -0.6
LSM3P5-201ENST00000566307 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
LSM3P5-201ENST00000566307 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
LSM3P5-201ENST00000566307 HSP90AB1P08238 724 aaKnown RBP11.28□□□□□ -0.6
LSM3P5-201ENST00000566307 RGS12O14924 1447 aa11.27□□□□□ -0.6
LSM3P5-201ENST00000566307 TCERG1O14776 1098 aaKnown RBP11.27□□□□□ -0.61
LSM3P5-201ENST00000566307 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.61
LSM3P5-201ENST00000566307 CHRNA2Q15822 529 aa11.27□□□□□ -0.61
LSM3P5-201ENST00000566307 IFNL2Q8IZJ0 200 aa11.27□□□□□ -0.61
LSM3P5-201ENST00000566307 TSHZ2Q9NRE2 1034 aa11.27□□□□□ -0.61
LSM3P5-201ENST00000566307 TOM1O60784 492 aa11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 PHKG2P15735 406 aa11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 EIF4A1P60842 406 aaKnown RBP11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 TEFQ10587 303 aa11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 CCDC30Q5VVM6 783 aa11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 TMEM57Q8N5G2 664 aa11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 TNNQ9UQP3 1299 aa11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 N4BP2Q86UW6 1770 aaPredicted RBP11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
LSM3P5-201ENST00000566307 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
LSM3P5-201ENST00000566307 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
LSM3P5-201ENST00000566307 ELL2O00472 640 aaPredicted RBP11.25□□□□□ -0.61
LSM3P5-201ENST00000566307 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
LSM3P5-201ENST00000566307 DCAF5Q96JK2 942 aa11.25□□□□□ -0.61
LSM3P5-201ENST00000566307 RWDD1Q9H446 243 aaPredicted RBP11.25□□□□□ -0.61
LSM3P5-201ENST00000566307 LGR6Q9HBX8 967 aa11.25□□□□□ -0.61
LSM3P5-201ENST00000566307 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
LSM3P5-201ENST00000566307 ITPRIPQ8IWB1 547 aa11.24□□□□□ -0.61
LSM3P5-201ENST00000566307 STK31Q9BXU1 1019 aa11.24□□□□□ -0.61
LSM3P5-201ENST00000566307 PCDH11XQ9BZA7 1347 aa11.24□□□□□ -0.61
LSM3P5-201ENST00000566307 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
LSM3P5-201ENST00000566307 BTBD11A6QL63 1104 aa11.23□□□□□ -0.61
LSM3P5-201ENST00000566307 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
LSM3P5-201ENST00000566307 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
LSM3P5-201ENST00000566307 TOM1L2Q6ZVM7 507 aa11.23□□□□□ -0.61
LSM3P5-201ENST00000566307 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
LSM3P5-201ENST00000566307 MIS18AQ9NYP9 233 aa11.23□□□□□ -0.61
LSM3P5-201ENST00000566307 PCDHB15Q9Y5E8 787 aa11.23□□□□□ -0.61
LSM3P5-201ENST00000566307 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
LSM3P5-201ENST00000566307 DISP2A7MBM2 1401 aa11.22□□□□□ -0.61
LSM3P5-201ENST00000566307 CYP27B1O15528 508 aa11.22□□□□□ -0.61
LSM3P5-201ENST00000566307 IL2RBP14784 551 aa11.22□□□□□ -0.61
LSM3P5-201ENST00000566307 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
LSM3P5-201ENST00000566307 ERVV-2B6SEH9 535 aa11.21□□□□□ -0.61
LSM3P5-201ENST00000566307 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
LSM3P5-201ENST00000566307 IGHDP01880 384 aa11.21□□□□□ -0.61
LSM3P5-201ENST00000566307 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
LSM3P5-201ENST00000566307 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.61
LSM3P5-201ENST00000566307 ZCRB1Q8TBF4 217 aaKnown RBP11.21□□□□□ -0.61
LSM3P5-201ENST00000566307 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
LSM3P5-201ENST00000566307 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.62
LSM3P5-201ENST00000566307 LRP6O75581 1613 aa11.2□□□□□ -0.62
LSM3P5-201ENST00000566307 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
LSM3P5-201ENST00000566307 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
LSM3P5-201ENST00000566307 SPDYE2Q495Y8 402 aa11.2□□□□□ -0.62
LSM3P5-201ENST00000566307 SMC5Q8IY18 1101 aa11.2□□□□□ -0.62
LSM3P5-201ENST00000566307 WNK3Q9BYP7 1800 aa11.2□□□□□ -0.62
LSM3P5-201ENST00000566307 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
LSM3P5-201ENST00000566307 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
LSM3P5-201ENST00000566307 EVA1CP58658 441 aa11.19□□□□□ -0.62
LSM3P5-201ENST00000566307 FLIIQ13045 1269 aa11.19□□□□□ -0.62
LSM3P5-201ENST00000566307 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
LSM3P5-201ENST00000566307 LARP1Q6PKG0 1096 aaKnown RBP11.19□□□□□ -0.62
LSM3P5-201ENST00000566307 CDCA7Q9BWT1 371 aaPredicted RBP11.19□□□□□ -0.62
LSM3P5-201ENST00000566307 PAPPAQ13219 1627 aa11.19□□□□□ -0.62
LSM3P5-201ENST00000566307 ZNF790Q6PG37 636 aa11.18□□□□□ -0.62
LSM3P5-201ENST00000566307 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
LSM3P5-201ENST00000566307 DBF4Q9UBU7 674 aaPredicted RBP11.18□□□□□ -0.62
LSM3P5-201ENST00000566307 THRAP3Q9Y2W1 955 aaKnown RBP11.18□□□□□ -0.62
LSM3P5-201ENST00000566307 UBR2Q8IWV8 1755 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms