RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-231ENST00000566279 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
TCF4-231ENST00000566279 RLBP1P12271 317 aa13.01□□□□□ -0.33
TCF4-231ENST00000566279 ZNF530Q6P9A1 599 aaPredicted RBP13.01□□□□□ -0.33
TCF4-231ENST00000566279 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
TCF4-231ENST00000566279 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
TCF4-231ENST00000566279 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
TCF4-231ENST00000566279 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
TCF4-231ENST00000566279 SPG7Q9UQ90 795 aa13□□□□□ -0.33
TCF4-231ENST00000566279 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
TCF4-231ENST00000566279 LMOD3Q0VAK6 560 aa13□□□□□ -0.33
TCF4-231ENST00000566279 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
TCF4-231ENST00000566279 KCNQ2O43526 872 aa12.99□□□□□ -0.33
TCF4-231ENST00000566279 PHKG2P15735 406 aa12.99□□□□□ -0.33
TCF4-231ENST00000566279 PLEKHO1Q53GL0 409 aaPredicted RBP12.99□□□□□ -0.33
TCF4-231ENST00000566279 SKAP1Q86WV1 359 aa12.99□□□□□ -0.33
TCF4-231ENST00000566279 SMC4Q9NTJ3 1288 aa12.99□□□□□ -0.33
TCF4-231ENST00000566279 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
TCF4-231ENST00000566279 TRIM37O94972 964 aa12.98□□□□□ -0.33
TCF4-231ENST00000566279 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
TCF4-231ENST00000566279 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
TCF4-231ENST00000566279 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
TCF4-231ENST00000566279 MS4A1P11836 297 aa12.98□□□□□ -0.33
TCF4-231ENST00000566279 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
TCF4-231ENST00000566279 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
TCF4-231ENST00000566279 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
TCF4-231ENST00000566279 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
TCF4-231ENST00000566279 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
TCF4-231ENST00000566279 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
TCF4-231ENST00000566279 GNAI1P63096 354 aa12.97□□□□□ -0.33
TCF4-231ENST00000566279 AMOTQ4VCS5 1084 aa12.97□□□□□ -0.33
TCF4-231ENST00000566279 IFNL2Q8IZJ0 200 aa12.97□□□□□ -0.33
TCF4-231ENST00000566279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
TCF4-231ENST00000566279 ITGB4P16144 1822 aa12.97□□□□□ -0.33
TCF4-231ENST00000566279 NHSQ6T4R5 1651 aa12.96□□□□□ -0.33
TCF4-231ENST00000566279 AAMPQ13685 434 aa12.96□□□□□ -0.33
TCF4-231ENST00000566279 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
TCF4-231ENST00000566279 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
TCF4-231ENST00000566279 FAM196AQ6ZSG2 479 aa12.96□□□□□ -0.33
TCF4-231ENST00000566279 LGR6Q9HBX8 967 aa12.96□□□□□ -0.33
TCF4-231ENST00000566279 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
TCF4-231ENST00000566279 ALDH1L2Q3SY69 923 aa12.95□□□□□ -0.34
TCF4-231ENST00000566279 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
TCF4-231ENST00000566279 IGHDP01880 384 aa12.95□□□□□ -0.34
TCF4-231ENST00000566279 TRIM27P14373 513 aa12.95□□□□□ -0.34
TCF4-231ENST00000566279 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
TCF4-231ENST00000566279 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
TCF4-231ENST00000566279 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
TCF4-231ENST00000566279 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
TCF4-231ENST00000566279 BTAF1O14981 1849 aa12.94□□□□□ -0.34
TCF4-231ENST00000566279 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
TCF4-231ENST00000566279 NOB1Q9ULX3 412 aaKnown RBP12.94□□□□□ -0.34
TCF4-231ENST00000566279 AKAP4Q5JQC9 854 aa12.94□□□□□ -0.34
TCF4-231ENST00000566279 ATF7IPQ6VMQ6 1270 aa12.94□□□□□ -0.34
TCF4-231ENST00000566279 MCM10Q7L590 875 aa12.94□□□□□ -0.34
TCF4-231ENST00000566279 FTSJ3Q8IY81 847 aaKnown RBP12.94□□□□□ -0.34
TCF4-231ENST00000566279 UPF1Q92900 1129 aaKnown RBP eCLIP12.94□□□□□ -0.34
TCF4-231ENST00000566279 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
TCF4-231ENST00000566279 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
TCF4-231ENST00000566279 VAMP4O75379 141 aa12.93□□□□□ -0.34
TCF4-231ENST00000566279 BRPF1P55201 1214 aaPredicted RBP12.93□□□□□ -0.34
TCF4-231ENST00000566279 TSPYL6Q8N831 410 aa12.93□□□□□ -0.34
TCF4-231ENST00000566279 GAS2L2Q8NHY3 880 aa12.93□□□□□ -0.34
TCF4-231ENST00000566279 PDE4AP27815 886 aa12.92□□□□□ -0.34
TCF4-231ENST00000566279 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
TCF4-231ENST00000566279 DEFB132Q7Z7B7 95 aa12.92□□□□□ -0.34
TCF4-231ENST00000566279 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
TCF4-231ENST00000566279 ADAMTS7Q9UKP4 1686 aa12.92□□□□□ -0.34
TCF4-231ENST00000566279 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
TCF4-231ENST00000566279 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
TCF4-231ENST00000566279 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
TCF4-231ENST00000566279 BACH2Q9BYV9 841 aa12.92□□□□□ -0.34
TCF4-231ENST00000566279 MSH5O43196 834 aa12.91□□□□□ -0.34
TCF4-231ENST00000566279 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
TCF4-231ENST00000566279 BCL9O00512 1426 aa12.91□□□□□ -0.34
TCF4-231ENST00000566279 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
TCF4-231ENST00000566279 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
TCF4-231ENST00000566279 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
TCF4-231ENST00000566279 APBA3O96018 575 aa12.9□□□□□ -0.34
TCF4-231ENST00000566279 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
TCF4-231ENST00000566279 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
TCF4-231ENST00000566279 PIGBQ92521 554 aa12.9□□□□□ -0.34
TCF4-231ENST00000566279 KCNQ4P56696 695 aa12.89□□□□□ -0.35
TCF4-231ENST00000566279 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
TCF4-231ENST00000566279 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
TCF4-231ENST00000566279 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
TCF4-231ENST00000566279 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
TCF4-231ENST00000566279 CHL1O00533 1208 aa12.89□□□□□ -0.35
TCF4-231ENST00000566279 TMEM57Q8N5G2 664 aa12.89□□□□□ -0.35
TCF4-231ENST00000566279 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
TCF4-231ENST00000566279 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
TCF4-231ENST00000566279 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
TCF4-231ENST00000566279 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
TCF4-231ENST00000566279 CABP4P57796 275 aa12.88□□□□□ -0.35
TCF4-231ENST00000566279 ITPRIPQ8IWB1 547 aa12.88□□□□□ -0.35
TCF4-231ENST00000566279 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
TCF4-231ENST00000566279 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
TCF4-231ENST00000566279 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
TCF4-231ENST00000566279 MRC1P22897 1456 aa12.87□□□□□ -0.35
TCF4-231ENST00000566279 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
TCF4-231ENST00000566279 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms