RNA–Protein interactions for RNA: ENST00000566197.1

BBS4-209, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-209ENST00000566197 KDM6AO15550 1401 aaPredicted RBP11.11□□□□□ -0.63
BBS4-209ENST00000566197 SIPA1L3O60292 1781 aaPredicted RBP11.11□□□□□ -0.63
BBS4-209ENST00000566197 CICQ96RK0 1608 aaPredicted RBP11.11□□□□□ -0.63
BBS4-209ENST00000566197 ERVV-2B6SEH9 535 aa11.11□□□□□ -0.63
BBS4-209ENST00000566197 PTGER2P43116 358 aa11.11□□□□□ -0.63
BBS4-209ENST00000566197 C1orf141Q5JVX7 400 aa11.11□□□□□ -0.63
BBS4-209ENST00000566197 SLC16A10Q8TF71 515 aa11.11□□□□□ -0.63
BBS4-209ENST00000566197 DCAF5Q96JK2 942 aa11.11□□□□□ -0.63
BBS4-209ENST00000566197 PNPLA7Q6ZV29 1317 aa11.1□□□□□ -0.63
BBS4-209ENST00000566197 MYH14Q7Z406 1995 aaKnown RBP11.1□□□□□ -0.63
BBS4-209ENST00000566197 TJP1Q07157 1748 aa11.09□□□□□ -0.63
BBS4-209ENST00000566197 DLG5Q8TDM6 1919 aa11.09□□□□□ -0.63
BBS4-209ENST00000566197 UBR2Q8IWV8 1755 aa11.09□□□□□ -0.63
BBS4-209ENST00000566197 HMOX1P09601 288 aa11.09□□□□□ -0.63
BBS4-209ENST00000566197 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
BBS4-209ENST00000566197 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
BBS4-209ENST00000566197 MRC1P22897 1456 aa11.08□□□□□ -0.64
BBS4-209ENST00000566197 LOC102724428A0A0B4J2F2 783 aa11.08□□□□□ -0.64
BBS4-209ENST00000566197 SIK1P57059 783 aa11.08□□□□□ -0.64
BBS4-209ENST00000566197 CABP4P57796 275 aa11.08□□□□□ -0.64
BBS4-209ENST00000566197 COL13A1Q5TAT6 717 aaPredicted RBP11.08□□□□□ -0.64
BBS4-209ENST00000566197 CFAP53Q96M91 514 aa11.08□□□□□ -0.64
BBS4-209ENST00000566197 C4AP0C0L4 1744 aa11.08□□□□□ -0.64
BBS4-209ENST00000566197 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
BBS4-209ENST00000566197 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
BBS4-209ENST00000566197 TNS4Q8IZW8 715 aa11.07□□□□□ -0.64
BBS4-209ENST00000566197 FLAD1Q8NFF5 587 aa11.07□□□□□ -0.64
BBS4-209ENST00000566197 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
BBS4-209ENST00000566197 MSH5O43196 834 aa11.06□□□□□ -0.64
BBS4-209ENST00000566197 PPP2R1AP30153 589 aa11.06□□□□□ -0.64
BBS4-209ENST00000566197 ATP6V1AP38606 617 aa11.06□□□□□ -0.64
BBS4-209ENST00000566197 COL23A1Q86Y22 540 aaPredicted RBP11.06□□□□□ -0.64
BBS4-209ENST00000566197 AK7Q96M32 723 aa11.06□□□□□ -0.64
BBS4-209ENST00000566197 ARXQ96QS3 562 aa11.06□□□□□ -0.64
BBS4-209ENST00000566197 MAP3K5Q99683 1374 aa11.05□□□□□ -0.64
BBS4-209ENST00000566197 POLD1P28340 1107 aa11.05□□□□□ -0.64
BBS4-209ENST00000566197 LINC00116Q8NCU8 138 aa11.05□□□□□ -0.64
BBS4-209ENST00000566197 SYT17Q9BSW7 474 aa11.05□□□□□ -0.64
BBS4-209ENST00000566197 SSFA2P28290 1259 aa11.04□□□□□ -0.64
BBS4-209ENST00000566197 ITPK1Q13572 414 aa11.04□□□□□ -0.64
BBS4-209ENST00000566197 MTHFSDQ2M296 383 aaKnown RBP11.04□□□□□ -0.64
BBS4-209ENST00000566197 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
BBS4-209ENST00000566197 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
BBS4-209ENST00000566197 FHDC1Q9C0D6 1143 aaPredicted RBP11.04□□□□□ -0.64
BBS4-209ENST00000566197 NUDCQ9Y266 331 aa11.04□□□□□ -0.64
BBS4-209ENST00000566197 RNMTO43148 476 aaKnown RBP11.03□□□□□ -0.64
BBS4-209ENST00000566197 SLC52A2Q9HAB3 445 aa11.03□□□□□ -0.64
BBS4-209ENST00000566197 KIF13BQ9NQT8 1826 aa11.02□□□□□ -0.64
BBS4-209ENST00000566197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.02□□□□□ -0.65
BBS4-209ENST00000566197 GNPATO15228 680 aa11.02□□□□□ -0.65
BBS4-209ENST00000566197 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
BBS4-209ENST00000566197 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.65
BBS4-209ENST00000566197 SLC4A9Q96Q91 983 aa11.02□□□□□ -0.65
BBS4-209ENST00000566197 LGR6Q9HBX8 967 aa11.02□□□□□ -0.65
BBS4-209ENST00000566197 KCPQ6ZWJ8 1503 aa11.02□□□□□ -0.65
BBS4-209ENST00000566197 PTCD1O75127 700 aaKnown RBP11.01□□□□□ -0.65
BBS4-209ENST00000566197 PHF14O94880 888 aa11.01□□□□□ -0.65
BBS4-209ENST00000566197 MSL1Q68DK7 614 aa11.01□□□□□ -0.65
BBS4-209ENST00000566197 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
BBS4-209ENST00000566197 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
BBS4-209ENST00000566197 CNTNAP4Q9C0A0 1308 aa11.01□□□□□ -0.65
BBS4-209ENST00000566197 GNAT3A8MTJ3 354 aa11□□□□□ -0.65
BBS4-209ENST00000566197 U2AF1L5P0DN76 240 aaPredicted RBP11□□□□□ -0.65
BBS4-209ENST00000566197 PRKAR2BP31323 418 aa11□□□□□ -0.65
BBS4-209ENST00000566197 U2AF1Q01081 240 aaKnown RBP eCLIP11□□□□□ -0.65
BBS4-209ENST00000566197 RTCBQ9Y3I0 505 aaKnown RBP11□□□□□ -0.65
BBS4-209ENST00000566197 FCHSD2O94868 740 aa10.99□□□□□ -0.65
BBS4-209ENST00000566197 ADRA2BP18089 450 aa10.99□□□□□ -0.65
BBS4-209ENST00000566197 SMIM5Q71RC9 77 aa10.99□□□□□ -0.65
BBS4-209ENST00000566197 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
BBS4-209ENST00000566197 N4BP2Q86UW6 1770 aaPredicted RBP10.98□□□□□ -0.65
BBS4-209ENST00000566197 TEFQ10587 303 aa10.98□□□□□ -0.65
BBS4-209ENST00000566197 DDX10Q13206 875 aaKnown RBP10.98□□□□□ -0.65
BBS4-209ENST00000566197 GPR162Q16538 588 aa10.98□□□□□ -0.65
BBS4-209ENST00000566197 TRAPPC3LQ5T215 181 aa10.98□□□□□ -0.65
BBS4-209ENST00000566197 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
BBS4-209ENST00000566197 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
BBS4-209ENST00000566197 AFDNP55196 1824 aaKnown RBP10.98□□□□□ -0.65
BBS4-209ENST00000566197 RPS6KA4O75676 772 aa10.97□□□□□ -0.65
BBS4-209ENST00000566197 CRKLP46109 303 aaKnown RBP10.97□□□□□ -0.65
BBS4-209ENST00000566197 SLC39A6Q13433 755 aa10.97□□□□□ -0.65
BBS4-209ENST00000566197 RALBP1Q15311 655 aa10.97□□□□□ -0.65
BBS4-209ENST00000566197 IL17REQ8NFR9 667 aa10.97□□□□□ -0.65
BBS4-209ENST00000566197 CEMIPQ8WUJ3 1361 aa10.97□□□□□ -0.65
BBS4-209ENST00000566197 KIAA1551Q9HCM1 1747 aa10.97□□□□□ -0.65
BBS4-209ENST00000566197 LAMB4A4D0S4 1761 aa10.97□□□□□ -0.65
BBS4-209ENST00000566197 BRCA1P38398 1863 aaKnown RBP10.97□□□□□ -0.65
BBS4-209ENST00000566197 ZEB1P37275 1124 aaPredicted RBP10.96□□□□□ -0.65
BBS4-209ENST00000566197 APLP1P51693 650 aa10.96□□□□□ -0.65
BBS4-209ENST00000566197 TTC5Q8N0Z6 440 aa10.96□□□□□ -0.65
BBS4-209ENST00000566197 GOLGB1Q14789 3259 aaKnown RBP10.96□□□□□ -0.66
BBS4-209ENST00000566197 NEFMP07197 916 aa10.95□□□□□ -0.66
BBS4-209ENST00000566197 RFC4P35249 363 aa10.95□□□□□ -0.66
BBS4-209ENST00000566197 DNAJC10Q8IXB1 793 aa10.95□□□□□ -0.66
BBS4-209ENST00000566197 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
BBS4-209ENST00000566197 NLGN2Q8NFZ4 835 aa10.95□□□□□ -0.66
BBS4-209ENST00000566197 RTF1Q92541 710 aaKnown RBP10.95□□□□□ -0.66
BBS4-209ENST00000566197 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
BBS4-209ENST00000566197 CCDC87Q9NVE4 849 aa10.95□□□□□ -0.66
BBS4-209ENST00000566197 CD2APQ9Y5K6 639 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms