RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 LOC102724428A0A0B4J2F2 783 aa23.81■■□□□ 1.4
CLK3-217ENST00000566126 CYP27B1O15528 508 aa23.81■■□□□ 1.4
CLK3-217ENST00000566126 SIK1P57059 783 aa23.81■■□□□ 1.4
CLK3-217ENST00000566126 A0A1W2PP64 1363 aa23.8■■□□□ 1.4
CLK3-217ENST00000566126 ITPK1Q13572 414 aa23.8■■□□□ 1.4
CLK3-217ENST00000566126 DCAF5Q96JK2 942 aa23.8■■□□□ 1.4
CLK3-217ENST00000566126 TATP17735 454 aaPredicted RBP23.79■■□□□ 1.4
CLK3-217ENST00000566126 CCDC87Q9NVE4 849 aa23.78■■□□□ 1.4
CLK3-217ENST00000566126 NLGN1Q8N2Q7 840 aa23.77■■□□□ 1.4
CLK3-217ENST00000566126 TMF1P82094 1093 aa23.76■■□□□ 1.39
CLK3-217ENST00000566126 ROCK2O75116 1388 aaKnown RBP23.76■■□□□ 1.39
CLK3-217ENST00000566126 RTL1A6NKG5 1358 aa23.75■■□□□ 1.39
CLK3-217ENST00000566126 TERF2IPQ9NYB0 399 aa23.74■■□□□ 1.39
CLK3-217ENST00000566126 PIM2Q9P1W9 311 aa23.74■■□□□ 1.39
CLK3-217ENST00000566126 FOXN1O15353 648 aa23.73■■□□□ 1.39
CLK3-217ENST00000566126 L3MBTL2Q969R5 705 aa23.73■■□□□ 1.39
CLK3-217ENST00000566126 COG3Q96JB2 828 aa23.73■■□□□ 1.39
CLK3-217ENST00000566126 ATP6V1AP38606 617 aa23.72■■□□□ 1.39
CLK3-217ENST00000566126 FAM161AQ3B820 660 aa23.72■■□□□ 1.39
CLK3-217ENST00000566126 DALRD3Q5D0E6 543 aaKnown RBP23.72■■□□□ 1.39
CLK3-217ENST00000566126 VEGFAP15692 232 aaPredicted RBP23.71■■□□□ 1.39
CLK3-217ENST00000566126 TRAPPC3LQ5T215 181 aa23.71■■□□□ 1.39
CLK3-217ENST00000566126 PRDM10Q9NQV6 1147 aa23.71■■□□□ 1.39
CLK3-217ENST00000566126 ASAP1Q9ULH1 1129 aa23.71■■□□□ 1.39
CLK3-217ENST00000566126 GYS1P13807 737 aa23.7■■□□□ 1.38
CLK3-217ENST00000566126 RRS1Q15050 365 aaKnown RBP23.7■■□□□ 1.38
CLK3-217ENST00000566126 NKX1-1Q15270 411 aaPredicted RBP23.7■■□□□ 1.38
CLK3-217ENST00000566126 PARP3Q9Y6F1 533 aa23.7■■□□□ 1.38
CLK3-217ENST00000566126 ZC3H4Q9UPT8 1303 aaKnown RBP23.69■■□□□ 1.38
CLK3-217ENST00000566126 KDM6AO15550 1401 aaPredicted RBP23.68■■□□□ 1.38
CLK3-217ENST00000566126 SMG6Q86US8 1419 aaKnown RBP23.68■■□□□ 1.38
CLK3-217ENST00000566126 ARHGEF1Q92888 912 aaKnown RBP23.68■■□□□ 1.38
CLK3-217ENST00000566126 RTCBQ9Y3I0 505 aaKnown RBP23.68■■□□□ 1.38
CLK3-217ENST00000566126 GLTPD2A6NH11 291 aa23.67■■□□□ 1.38
CLK3-217ENST00000566126 MKRN1Q9UHC7 482 aaKnown RBP23.67■■□□□ 1.38
CLK3-217ENST00000566126 RASSF7Q02833 373 aa23.66■■□□□ 1.38
CLK3-217ENST00000566126 POTECB2RU33 542 aa23.64■■□□□ 1.37
CLK3-217ENST00000566126 CHRNA5P30532 468 aa23.64■■□□□ 1.37
CLK3-217ENST00000566126 TMOD3Q9NYL9 352 aa23.64■■□□□ 1.37
CLK3-217ENST00000566126 COL5A3P25940 1745 aaPredicted RBP23.64■■□□□ 1.37
CLK3-217ENST00000566126 TIAM2Q8IVF5 1701 aa23.64■■□□□ 1.37
CLK3-217ENST00000566126 CCDC88AQ3V6T2 1871 aa23.64■■□□□ 1.37
CLK3-217ENST00000566126 KDRP35968 1356 aa23.64■■□□□ 1.37
CLK3-217ENST00000566126 ADRA2BP18089 450 aa23.63■■□□□ 1.37
CLK3-217ENST00000566126 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
CLK3-217ENST00000566126 CREBZFQ9NS37 354 aa23.63■■□□□ 1.37
CLK3-217ENST00000566126 ATG3Q9NT62 314 aa23.63■■□□□ 1.37
CLK3-217ENST00000566126 SLC4A9Q96Q91 983 aa23.62■■□□□ 1.37
CLK3-217ENST00000566126 ZNF831Q5JPB2 1677 aa23.62■■□□□ 1.37
CLK3-217ENST00000566126 INSRP06213 1382 aa23.62■■□□□ 1.37
CLK3-217ENST00000566126 MYH14Q7Z406 1995 aaKnown RBP23.61■■□□□ 1.37
CLK3-217ENST00000566126 RFC4P35249 363 aa23.61■■□□□ 1.37
CLK3-217ENST00000566126 CTCFP49711 727 aaPredicted RBP23.6■■□□□ 1.37
CLK3-217ENST00000566126 LMNB1P20700 586 aa23.59■■□□□ 1.37
CLK3-217ENST00000566126 DDR1Q08345 913 aa23.59■■□□□ 1.37
CLK3-217ENST00000566126 RC3H1Q5TC82 1133 aaKnown RBP23.59■■□□□ 1.37
CLK3-217ENST00000566126 ABHD8Q96I13 439 aa23.59■■□□□ 1.37
CLK3-217ENST00000566126 RPS6KA4O75676 772 aa23.58■■□□□ 1.37
CLK3-217ENST00000566126 CNTNAP1P78357 1384 aa23.57■■□□□ 1.36
CLK3-217ENST00000566126 PUS7Q96PZ0 661 aaKnown RBP23.57■■□□□ 1.36
CLK3-217ENST00000566126 NCAPD2Q15021 1401 aa23.57■■□□□ 1.36
CLK3-217ENST00000566126 CNTNAP4Q9C0A0 1308 aa23.57■■□□□ 1.36
CLK3-217ENST00000566126 VIRMAQ69YN4 1812 aaKnown RBP23.55■■□□□ 1.36
CLK3-217ENST00000566126 LBX1P52954 281 aa23.55■■□□□ 1.36
CLK3-217ENST00000566126 FKBP8Q14318 412 aa23.55■■□□□ 1.36
CLK3-217ENST00000566126 SPG7Q9UQ90 795 aa23.55■■□□□ 1.36
CLK3-217ENST00000566126 FLT4P35916 1363 aa23.54■■□□□ 1.36
CLK3-217ENST00000566126 SRP68Q9UHB9 627 aaKnown RBP23.54■■□□□ 1.36
CLK3-217ENST00000566126 MLLT1Q03111 559 aaPredicted RBP23.53■■□□□ 1.36
CLK3-217ENST00000566126 AIDAQ96BJ3 306 aa23.53■■□□□ 1.36
CLK3-217ENST00000566126 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
CLK3-217ENST00000566126 FYB1O15117 783 aa23.52■■□□□ 1.36
CLK3-217ENST00000566126 CHADLQ6NUI6 762 aa23.52■■□□□ 1.36
CLK3-217ENST00000566126 DLEC1Q9Y238 1755 aa23.51■■□□□ 1.35
CLK3-217ENST00000566126 RBM42Q9BTD8 480 aaKnown RBP23.51■■□□□ 1.35
CLK3-217ENST00000566126 WBP1LQ9NX94 342 aa23.51■■□□□ 1.35
CLK3-217ENST00000566126 POLRMTO00411 1230 aaKnown RBP23.5■■□□□ 1.35
CLK3-217ENST00000566126 POTEIP0CG38 1075 aa23.5■■□□□ 1.35
CLK3-217ENST00000566126 POTEJP0CG39 1038 aa23.5■■□□□ 1.35
CLK3-217ENST00000566126 PHKG2P15735 406 aa23.5■■□□□ 1.35
CLK3-217ENST00000566126 VEGFBP49765 207 aa23.5■■□□□ 1.35
CLK3-217ENST00000566126 RGS19P49795 217 aa23.5■■□□□ 1.35
CLK3-217ENST00000566126 USP42Q9H9J4 1324 aaKnown RBP23.5■■□□□ 1.35
CLK3-217ENST00000566126 KIF24Q5T7B8 1368 aa23.5■■□□□ 1.35
CLK3-217ENST00000566126 AFDNP55196 1824 aaKnown RBP23.48■■□□□ 1.35
CLK3-217ENST00000566126 NFKBIEO00221 500 aa23.48■■□□□ 1.35
CLK3-217ENST00000566126 IFNL2Q8IZJ0 200 aa23.48■■□□□ 1.35
CLK3-217ENST00000566126 CARD11Q9BXL7 1154 aa23.48■■□□□ 1.35
CLK3-217ENST00000566126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.48■■□□□ 1.35
CLK3-217ENST00000566126 DICER1Q9UPY3 1922 aaKnown RBP23.48■■□□□ 1.35
CLK3-217ENST00000566126 HSPA8P11142 646 aaKnown RBP23.47■■□□□ 1.35
CLK3-217ENST00000566126 TM4SF1P30408 202 aa23.47■■□□□ 1.35
CLK3-217ENST00000566126 TONSLQ96HA7 1378 aa23.47■■□□□ 1.35
CLK3-217ENST00000566126 ADAMTS7Q9UKP4 1686 aa23.47■■□□□ 1.35
CLK3-217ENST00000566126 DPY19L2Q6NUT2 758 aa23.46■■□□□ 1.35
CLK3-217ENST00000566126 PASKQ96RG2 1323 aa23.46■■□□□ 1.35
CLK3-217ENST00000566126 SIN3AQ96ST3 1273 aa23.46■■□□□ 1.35
CLK3-217ENST00000566126 TNRC18O15417 2968 aaPredicted RBP23.44■■□□□ 1.34
CLK3-217ENST00000566126 NRXN2Q9P2S2 1712 aa23.43■■□□□ 1.34
CLK3-217ENST00000566126 KIF20BQ96Q89 1820 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms