RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 QSER1Q2KHR3 1735 aa27.72■■■□□ 2.03
EDC3-209ENST00000566119 COL3A1P02461 1466 aaPredicted RBP27.71■■■□□ 2.03
EDC3-209ENST00000566119 MTHFSDQ2M296 383 aaKnown RBP27.71■■■□□ 2.03
EDC3-209ENST00000566119 AMIGO3Q86WK7 504 aa27.71■■■□□ 2.03
EDC3-209ENST00000566119 RBM42Q9BTD8 480 aaKnown RBP27.71■■■□□ 2.03
EDC3-209ENST00000566119 C5P01031 1676 aa27.71■■■□□ 2.03
EDC3-209ENST00000566119 PPP2R1AP30153 589 aa27.7■■■□□ 2.02
EDC3-209ENST00000566119 SMIM5Q71RC9 77 aa27.7■■■□□ 2.02
EDC3-209ENST00000566119 CFAP53Q96M91 514 aa27.7■■■□□ 2.02
EDC3-209ENST00000566119 SLC4A9Q96Q91 983 aa27.7■■■□□ 2.02
EDC3-209ENST00000566119 LGR6Q9HBX8 967 aa27.7■■■□□ 2.02
EDC3-209ENST00000566119 DCAF8L1A6NGE4 600 aa27.68■■■□□ 2.02
EDC3-209ENST00000566119 TUBGCP6Q96RT7 1819 aa27.68■■■□□ 2.02
EDC3-209ENST00000566119 PHF14O94880 888 aa27.67■■■□□ 2.02
EDC3-209ENST00000566119 C4BP0C0L5 1744 aa27.67■■■□□ 2.02
EDC3-209ENST00000566119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.66■■■□□ 2.02
EDC3-209ENST00000566119 MSL1Q68DK7 614 aa27.66■■■□□ 2.02
EDC3-209ENST00000566119 RNMTO43148 476 aaKnown RBP27.65■■■□□ 2.02
EDC3-209ENST00000566119 PTCD1O75127 700 aaKnown RBP27.65■■■□□ 2.02
EDC3-209ENST00000566119 TAF1LQ8IZX4 1826 aa27.64■■■□□ 2.02
EDC3-209ENST00000566119 GNPATO15228 680 aa27.64■■■□□ 2.02
EDC3-209ENST00000566119 SSFA2P28290 1259 aa27.64■■■□□ 2.02
EDC3-209ENST00000566119 SLC52A2Q9HAB3 445 aa27.64■■■□□ 2.02
EDC3-209ENST00000566119 MAP3K5Q99683 1374 aa27.62■■■□□ 2.01
EDC3-209ENST00000566119 KLHL34Q8N239 644 aa27.62■■■□□ 2.01
EDC3-209ENST00000566119 NUDCQ9Y266 331 aa27.62■■■□□ 2.01
EDC3-209ENST00000566119 RC3H1Q5TC82 1133 aaKnown RBP27.59■■■□□ 2.01
EDC3-209ENST00000566119 COL24A1Q17RW2 1714 aa27.58■■■□□ 2.01
EDC3-209ENST00000566119 GAS2L2Q8NHY3 880 aa27.58■■■□□ 2.01
EDC3-209ENST00000566119 PHACTR3Q96KR7 559 aa27.58■■■□□ 2.01
EDC3-209ENST00000566119 RSPH6AQ9H0K4 717 aa27.58■■■□□ 2.01
EDC3-209ENST00000566119 RTCBQ9Y3I0 505 aaKnown RBP27.58■■■□□ 2.01
EDC3-209ENST00000566119 U2AF1L5P0DN76 240 aaPredicted RBP27.57■■■□□ 2
EDC3-209ENST00000566119 PRKAR2BP31323 418 aa27.57■■■□□ 2
EDC3-209ENST00000566119 U2AF1Q01081 240 aaKnown RBP eCLIP27.57■■■□□ 2
EDC3-209ENST00000566119 SLC39A6Q13433 755 aa27.56■■■□□ 2
EDC3-209ENST00000566119 TRAPPC3LQ5T215 181 aa27.56■■■□□ 2
EDC3-209ENST00000566119 GNAT3A8MTJ3 354 aa27.55■■■□□ 2
EDC3-209ENST00000566119 CNTNAP4Q9C0A0 1308 aa27.55■■■□□ 2
EDC3-209ENST00000566119 RPS6KA4O75676 772 aa27.54■■■□□ 2
EDC3-209ENST00000566119 IL17REQ8NFR9 667 aa27.54■■■□□ 2
EDC3-209ENST00000566119 SCN11AQ9UI33 1791 aa27.54■■■□□ 2
EDC3-209ENST00000566119 NLGN2Q8NFZ4 835 aa27.53■■■□□ 2
EDC3-209ENST00000566119 UBR3Q6ZT12 1888 aa27.53■■■□□ 2
EDC3-209ENST00000566119 FCHSD2O94868 740 aa27.52■■■□□ 2
EDC3-209ENST00000566119 CRKLP46109 303 aaKnown RBP27.52■■■□□ 2
EDC3-209ENST00000566119 ARHGEF1Q92888 912 aaKnown RBP27.52■■■□□ 2
EDC3-209ENST00000566119 ZNF831Q5JPB2 1677 aa27.52■■■□□ 2
EDC3-209ENST00000566119 DDX10Q13206 875 aaKnown RBP27.51■■□□□ 1.99
EDC3-209ENST00000566119 MRC1P22897 1456 aa27.51■■□□□ 1.99
EDC3-209ENST00000566119 ADRA2BP18089 450 aa27.5■■□□□ 1.99
EDC3-209ENST00000566119 YY1P25490 414 aa27.49■■□□□ 1.99
EDC3-209ENST00000566119 DNAJC10Q8IXB1 793 aa27.49■■□□□ 1.99
EDC3-209ENST00000566119 TEFQ10587 303 aa27.48■■□□□ 1.99
EDC3-209ENST00000566119 GPR162Q16538 588 aa27.48■■□□□ 1.99
EDC3-209ENST00000566119 ADAMTS7Q9UKP4 1686 aa27.47■■□□□ 1.99
EDC3-209ENST00000566119 RFC4P35249 363 aa27.47■■□□□ 1.99
EDC3-209ENST00000566119 INTS5Q6P9B9 1019 aaKnown RBP27.47■■□□□ 1.99
EDC3-209ENST00000566119 CD2APQ9Y5K6 639 aa27.47■■□□□ 1.99
EDC3-209ENST00000566119 NLGN1Q8N2Q7 840 aa27.45■■□□□ 1.98
EDC3-209ENST00000566119 CYP19A1P11511 503 aaPredicted RBP27.44■■□□□ 1.98
EDC3-209ENST00000566119 TTC5Q8N0Z6 440 aa27.44■■□□□ 1.98
EDC3-209ENST00000566119 VSIG10Q8N0Z9 540 aa27.44■■□□□ 1.98
EDC3-209ENST00000566119 COL5A3P25940 1745 aaPredicted RBP27.44■■□□□ 1.98
EDC3-209ENST00000566119 MMP10P09238 476 aa27.43■■□□□ 1.98
EDC3-209ENST00000566119 GYS1P13807 737 aa27.43■■□□□ 1.98
EDC3-209ENST00000566119 PELP1Q8IZL8 1130 aaKnown RBP27.43■■□□□ 1.98
EDC3-209ENST00000566119 CCDC87Q9NVE4 849 aa27.43■■□□□ 1.98
EDC3-209ENST00000566119 RALBP1Q15311 655 aa27.42■■□□□ 1.98
EDC3-209ENST00000566119 ZNF790Q6PG37 636 aa27.42■■□□□ 1.98
EDC3-209ENST00000566119 CEMIPQ8WUJ3 1361 aa27.42■■□□□ 1.98
EDC3-209ENST00000566119 KCPQ6ZWJ8 1503 aa27.41■■□□□ 1.98
EDC3-209ENST00000566119 UTRNP46939 3433 aa27.41■■□□□ 1.98
EDC3-209ENST00000566119 ZNF496Q96IT1 587 aaPredicted RBP27.4■■□□□ 1.98
EDC3-209ENST00000566119 TJP1Q07157 1748 aa27.4■■□□□ 1.98
EDC3-209ENST00000566119 MCM10Q7L590 875 aa27.39■■□□□ 1.98
EDC3-209ENST00000566119 RTF1Q92541 710 aaKnown RBP27.39■■□□□ 1.98
EDC3-209ENST00000566119 SRP68Q9UHB9 627 aaKnown RBP27.39■■□□□ 1.98
EDC3-209ENST00000566119 MYH14Q7Z406 1995 aaKnown RBP27.38■■□□□ 1.97
EDC3-209ENST00000566119 BTBD11A6QL63 1104 aa27.37■■□□□ 1.97
EDC3-209ENST00000566119 CICQ96RK0 1608 aaPredicted RBP27.37■■□□□ 1.97
EDC3-209ENST00000566119 HTATSF1O43719 755 aaKnown RBP27.36■■□□□ 1.97
EDC3-209ENST00000566119 YBX3P16989 372 aaKnown RBP eCLIP27.36■■□□□ 1.97
EDC3-209ENST00000566119 DCTN1Q14203 1278 aa27.36■■□□□ 1.97
EDC3-209ENST00000566119 ZBTB1Q9Y2K1 713 aa27.36■■□□□ 1.97
EDC3-209ENST00000566119 SOS1Q07889 1333 aaPredicted RBP27.36■■□□□ 1.97
EDC3-209ENST00000566119 USP42Q9H9J4 1324 aaKnown RBP27.36■■□□□ 1.97
EDC3-209ENST00000566119 GOLGB1Q14789 3259 aaKnown RBP27.35■■□□□ 1.97
EDC3-209ENST00000566119 KCNQ3O43525 872 aa27.35■■□□□ 1.97
EDC3-209ENST00000566119 NEFMP07197 916 aa27.35■■□□□ 1.97
EDC3-209ENST00000566119 PLEKHF1Q96S99 279 aa27.35■■□□□ 1.97
EDC3-209ENST00000566119 STARD3NLO95772 234 aa27.34■■□□□ 1.97
EDC3-209ENST00000566119 FKBP8Q14318 412 aa27.34■■□□□ 1.97
EDC3-209ENST00000566119 FMNL2Q96PY5 1086 aa27.34■■□□□ 1.97
EDC3-209ENST00000566119 HEG1Q9ULI3 1381 aa27.34■■□□□ 1.97
EDC3-209ENST00000566119 VIRMAQ69YN4 1812 aaKnown RBP27.33■■□□□ 1.97
EDC3-209ENST00000566119 CANXP27824 592 aaKnown RBP27.33■■□□□ 1.97
EDC3-209ENST00000566119 TEX13AQ9BXU3 409 aaPredicted RBP27.33■■□□□ 1.97
EDC3-209ENST00000566119 ZPR1O75312 459 aa27.32■■□□□ 1.96
EDC3-209ENST00000566119 PARP3Q9Y6F1 533 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms