RNA–Protein interactions for RNA: ENST00000566042.5

CPNE2-206, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 3,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-206ENST00000566042 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
CPNE2-206ENST00000566042 ANKRD44Q8N8A2 993 aa12.78□□□□□ -0.36
CPNE2-206ENST00000566042 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
CPNE2-206ENST00000566042 CHPF2Q9P2E5 772 aa12.78□□□□□ -0.36
CPNE2-206ENST00000566042 NFAT5O94916 1531 aa12.77□□□□□ -0.36
CPNE2-206ENST00000566042 C1orf167Q5SNV9 1468 aa12.77□□□□□ -0.36
CPNE2-206ENST00000566042 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
CPNE2-206ENST00000566042 DCTPP1Q9H773 170 aa12.77□□□□□ -0.37
CPNE2-206ENST00000566042 ATP10DQ9P241 1426 aa12.77□□□□□ -0.37
CPNE2-206ENST00000566042 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
CPNE2-206ENST00000566042 GSPT1P15170 499 aaKnown RBP12.76□□□□□ -0.37
CPNE2-206ENST00000566042 BECN1Q14457 450 aa12.76□□□□□ -0.37
CPNE2-206ENST00000566042 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
CPNE2-206ENST00000566042 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
CPNE2-206ENST00000566042 PXDNQ92626 1479 aa12.76□□□□□ -0.37
CPNE2-206ENST00000566042 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
CPNE2-206ENST00000566042 TBC1D9Q6ZT07 1266 aa12.76□□□□□ -0.37
CPNE2-206ENST00000566042 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
CPNE2-206ENST00000566042 PNMA6EA0A0J9YXQ4 647 aa12.75□□□□□ -0.37
CPNE2-206ENST00000566042 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
CPNE2-206ENST00000566042 LRRFIP2Q9Y608 721 aaKnown RBP12.75□□□□□ -0.37
CPNE2-206ENST00000566042 BMP2KLQ5H9B9 411 aa12.75□□□□□ -0.37
CPNE2-206ENST00000566042 CCT4P50991 539 aaKnown RBP12.75□□□□□ -0.37
CPNE2-206ENST00000566042 EIF4A1P60842 406 aaKnown RBP12.75□□□□□ -0.37
CPNE2-206ENST00000566042 RPAP2Q8IXW5 612 aaPredicted RBP12.75□□□□□ -0.37
CPNE2-206ENST00000566042 AKAP4Q5JQC9 854 aa12.74□□□□□ -0.37
CPNE2-206ENST00000566042 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
CPNE2-206ENST00000566042 GNAI2P04899 355 aa12.74□□□□□ -0.37
CPNE2-206ENST00000566042 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
CPNE2-206ENST00000566042 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
CPNE2-206ENST00000566042 PI4KAP2A4QPH2 592 aa12.73□□□□□ -0.37
CPNE2-206ENST00000566042 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
CPNE2-206ENST00000566042 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
CPNE2-206ENST00000566042 PROSER3Q2NL68 480 aa12.73□□□□□ -0.37
CPNE2-206ENST00000566042 PI4KAP1Q8N8J0 262 aa12.73□□□□□ -0.37
CPNE2-206ENST00000566042 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
CPNE2-206ENST00000566042 ERBB3P21860 1342 aa12.73□□□□□ -0.37
CPNE2-206ENST00000566042 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
CPNE2-206ENST00000566042 IL1RAPL2Q9NP60 686 aa12.72□□□□□ -0.37
CPNE2-206ENST00000566042 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.37
CPNE2-206ENST00000566042 HMMRO75330 724 aa12.71□□□□□ -0.37
CPNE2-206ENST00000566042 NBPF7P0C2Y1 421 aaPredicted RBP12.71□□□□□ -0.37
CPNE2-206ENST00000566042 UBTFL1P0CB47 393 aaPredicted RBP12.71□□□□□ -0.37
CPNE2-206ENST00000566042 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
CPNE2-206ENST00000566042 AMOTQ4VCS5 1084 aa12.7□□□□□ -0.38
CPNE2-206ENST00000566042 TTC22Q5TAA0 569 aa12.7□□□□□ -0.38
CPNE2-206ENST00000566042 MST1RQ04912 1400 aa12.7□□□□□ -0.38
CPNE2-206ENST00000566042 MYL6BP14649 208 aa12.69□□□□□ -0.38
CPNE2-206ENST00000566042 SDSP20132 328 aa12.69□□□□□ -0.38
CPNE2-206ENST00000566042 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
CPNE2-206ENST00000566042 NFATC2IPQ8NCF5 419 aa12.69□□□□□ -0.38
CPNE2-206ENST00000566042 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
CPNE2-206ENST00000566042 CDC45O75419 566 aa12.69□□□□□ -0.38
CPNE2-206ENST00000566042 SRCIN1Q9C0H9 1055 aa12.69□□□□□ -0.38
CPNE2-206ENST00000566042 CD2BP2O95400 341 aaKnown RBP12.68□□□□□ -0.38
CPNE2-206ENST00000566042 GNAI3P08754 354 aa12.68□□□□□ -0.38
CPNE2-206ENST00000566042 CWF19L2Q2TBE0 894 aaKnown RBP12.68□□□□□ -0.38
CPNE2-206ENST00000566042 USP35Q9P2H5 1018 aa12.68□□□□□ -0.38
CPNE2-206ENST00000566042 NPHP3Q7Z494 1330 aa12.68□□□□□ -0.38
CPNE2-206ENST00000566042 HSCBQ8IWL3 235 aa12.68□□□□□ -0.38
CPNE2-206ENST00000566042 MAP4K4O95819 1239 aaPredicted RBP12.68□□□□□ -0.38
CPNE2-206ENST00000566042 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
CPNE2-206ENST00000566042 PPP1R42Q7Z4L9 355 aa12.67□□□□□ -0.38
CPNE2-206ENST00000566042 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
CPNE2-206ENST00000566042 MAP3K2Q9Y2U5 619 aa12.67□□□□□ -0.38
CPNE2-206ENST00000566042 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
CPNE2-206ENST00000566042 TATP17735 454 aaPredicted RBP12.67□□□□□ -0.38
CPNE2-206ENST00000566042 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
CPNE2-206ENST00000566042 SRGAP3O43295 1099 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 SURF6O75683 361 aaKnown RBP12.66□□□□□ -0.38
CPNE2-206ENST00000566042 RILPL2Q969X0 211 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
CPNE2-206ENST00000566042 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
CPNE2-206ENST00000566042 LRRCC1Q9C099 1032 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 RGPD5Q99666 1765 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 PRDM11Q9NQV5 511 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
CPNE2-206ENST00000566042 PDE1AP54750 535 aa12.65□□□□□ -0.38
CPNE2-206ENST00000566042 ATP8B2P98198 1209 aa12.65□□□□□ -0.38
CPNE2-206ENST00000566042 ARXQ96QS3 562 aa12.65□□□□□ -0.38
CPNE2-206ENST00000566042 SLIT3O75094 1523 aa12.65□□□□□ -0.38
CPNE2-206ENST00000566042 HSP90AA1P07900 732 aaKnown RBP12.65□□□□□ -0.38
CPNE2-206ENST00000566042 KIF2CQ99661 725 aa12.65□□□□□ -0.38
CPNE2-206ENST00000566042 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
CPNE2-206ENST00000566042 HSP90AB1P08238 724 aaKnown RBP12.65□□□□□ -0.39
CPNE2-206ENST00000566042 BEND3Q5T5X7 828 aa12.65□□□□□ -0.39
CPNE2-206ENST00000566042 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.39
CPNE2-206ENST00000566042 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.39
CPNE2-206ENST00000566042 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
CPNE2-206ENST00000566042 RBM25P49756 843 aaKnown RBP12.64□□□□□ -0.39
CPNE2-206ENST00000566042 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
CPNE2-206ENST00000566042 C9orf78Q9NZ63 289 aaPredicted RBP12.64□□□□□ -0.39
CPNE2-206ENST00000566042 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
CPNE2-206ENST00000566042 MEGF6O75095 1541 aa12.64□□□□□ -0.39
CPNE2-206ENST00000566042 CYP27B1O15528 508 aa12.64□□□□□ -0.39
CPNE2-206ENST00000566042 PHKG2P15735 406 aa12.64□□□□□ -0.39
CPNE2-206ENST00000566042 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms