RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 MSH5O43196 834 aa32.21■■■□□ 2.75
TCF4-230ENST00000565908 LINC00116Q8NCU8 138 aa32.21■■■□□ 2.75
TCF4-230ENST00000565908 TAF1LQ8IZX4 1826 aa32.21■■■□□ 2.75
TCF4-230ENST00000565908 TUBGCP6Q96RT7 1819 aa32.21■■■□□ 2.75
TCF4-230ENST00000565908 C4BP0C0L5 1744 aa32.2■■■□□ 2.75
TCF4-230ENST00000565908 ITPK1Q13572 414 aa32.2■■■□□ 2.75
TCF4-230ENST00000565908 RBM42Q9BTD8 480 aaKnown RBP32.2■■■□□ 2.75
TCF4-230ENST00000565908 RNMTO43148 476 aaKnown RBP32.19■■■□□ 2.74
TCF4-230ENST00000565908 ZEB1P37275 1124 aaPredicted RBP32.19■■■□□ 2.74
TCF4-230ENST00000565908 GAS2L2Q8NHY3 880 aa32.19■■■□□ 2.74
TCF4-230ENST00000565908 POLD1P28340 1107 aa32.18■■■□□ 2.74
TCF4-230ENST00000565908 ARXQ96QS3 562 aa32.18■■■□□ 2.74
TCF4-230ENST00000565908 SLC52A2Q9HAB3 445 aa32.18■■■□□ 2.74
TCF4-230ENST00000565908 LGR6Q9HBX8 967 aa32.18■■■□□ 2.74
TCF4-230ENST00000565908 DDX10Q13206 875 aaKnown RBP32.17■■■□□ 2.74
TCF4-230ENST00000565908 U2AF1L5P0DN76 240 aaPredicted RBP32.16■■■□□ 2.74
TCF4-230ENST00000565908 U2AF1Q01081 240 aaKnown RBP eCLIP32.16■■■□□ 2.74
TCF4-230ENST00000565908 RSPH6AQ9H0K4 717 aa32.16■■■□□ 2.74
TCF4-230ENST00000565908 SCN11AQ9UI33 1791 aa32.15■■■□□ 2.74
TCF4-230ENST00000565908 PRKAR2BP31323 418 aa32.15■■■□□ 2.74
TCF4-230ENST00000565908 SLC4A9Q96Q91 983 aa32.15■■■□□ 2.74
TCF4-230ENST00000565908 MRC1P22897 1456 aa32.13■■■□□ 2.73
TCF4-230ENST00000565908 SSFA2P28290 1259 aa32.13■■■□□ 2.73
TCF4-230ENST00000565908 FHDC1Q9C0D6 1143 aaPredicted RBP32.13■■■□□ 2.73
TCF4-230ENST00000565908 MAP3K5Q99683 1374 aa32.12■■■□□ 2.73
TCF4-230ENST00000565908 PTCD1O75127 700 aaKnown RBP32.12■■■□□ 2.73
TCF4-230ENST00000565908 FCHSD2O94868 740 aa32.12■■■□□ 2.73
TCF4-230ENST00000565908 ZNF831Q5JPB2 1677 aa32.11■■■□□ 2.73
TCF4-230ENST00000565908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.11■■■□□ 2.73
TCF4-230ENST00000565908 GNAT3A8MTJ3 354 aa32.11■■■□□ 2.73
TCF4-230ENST00000565908 GNPATO15228 680 aa32.11■■■□□ 2.73
TCF4-230ENST00000565908 PHF14O94880 888 aa32.11■■■□□ 2.73
TCF4-230ENST00000565908 RALBP1Q15311 655 aa32.11■■■□□ 2.73
TCF4-230ENST00000565908 AMIGO3Q86WK7 504 aa32.11■■■□□ 2.73
TCF4-230ENST00000565908 PHACTR3Q96KR7 559 aa32.1■■■□□ 2.73
TCF4-230ENST00000565908 SYT17Q9BSW7 474 aa32.09■■■□□ 2.73
TCF4-230ENST00000565908 ADAMTS7Q9UKP4 1686 aa32.08■■■□□ 2.73
TCF4-230ENST00000565908 RC3H1Q5TC82 1133 aaKnown RBP32.08■■■□□ 2.73
TCF4-230ENST00000565908 COL24A1Q17RW2 1714 aa32.08■■■□□ 2.73
TCF4-230ENST00000565908 CNTNAP4Q9C0A0 1308 aa32.07■■■□□ 2.72
TCF4-230ENST00000565908 DCAF8L1A6NGE4 600 aa32.06■■■□□ 2.72
TCF4-230ENST00000565908 MSL1Q68DK7 614 aa32.06■■■□□ 2.72
TCF4-230ENST00000565908 UBR3Q6ZT12 1888 aa32.06■■■□□ 2.72
TCF4-230ENST00000565908 SMIM5Q71RC9 77 aa32.05■■■□□ 2.72
TCF4-230ENST00000565908 RTCBQ9Y3I0 505 aaKnown RBP32.05■■■□□ 2.72
TCF4-230ENST00000565908 TEFQ10587 303 aa32.04■■■□□ 2.72
TCF4-230ENST00000565908 IL17REQ8NFR9 667 aa32.04■■■□□ 2.72
TCF4-230ENST00000565908 SLC39A6Q13433 755 aa32.03■■■□□ 2.72
TCF4-230ENST00000565908 TRAPPC3LQ5T215 181 aa32.01■■■□□ 2.71
TCF4-230ENST00000565908 RPS6KA4O75676 772 aa32■■■□□ 2.71
TCF4-230ENST00000565908 ADRA2BP18089 450 aa32■■■□□ 2.71
TCF4-230ENST00000565908 NEFMP07197 916 aa31.99■■■□□ 2.71
TCF4-230ENST00000565908 KLHL34Q8N239 644 aa31.99■■■□□ 2.71
TCF4-230ENST00000565908 COL5A3P25940 1745 aaPredicted RBP31.99■■■□□ 2.71
TCF4-230ENST00000565908 CEMIPQ8WUJ3 1361 aa31.98■■■□□ 2.71
TCF4-230ENST00000565908 CRKLP46109 303 aaKnown RBP31.98■■■□□ 2.71
TCF4-230ENST00000565908 TTC5Q8N0Z6 440 aa31.98■■■□□ 2.71
TCF4-230ENST00000565908 RTF1Q92541 710 aaKnown RBP31.97■■■□□ 2.71
TCF4-230ENST00000565908 MYBBP1AQ9BQG0 1328 aaKnown RBP31.97■■■□□ 2.71
TCF4-230ENST00000565908 CICQ96RK0 1608 aaPredicted RBP31.97■■■□□ 2.71
TCF4-230ENST00000565908 VIRMAQ69YN4 1812 aaKnown RBP31.96■■■□□ 2.71
TCF4-230ENST00000565908 DNAJC10Q8IXB1 793 aa31.96■■■□□ 2.71
TCF4-230ENST00000565908 VSIG10Q8N0Z9 540 aa31.96■■■□□ 2.71
TCF4-230ENST00000565908 KCPQ6ZWJ8 1503 aa31.95■■■□□ 2.71
TCF4-230ENST00000565908 ARHGEF1Q92888 912 aaKnown RBP31.94■■■□□ 2.7
TCF4-230ENST00000565908 PNNQ9H307 717 aaKnown RBP31.94■■■□□ 2.7
TCF4-230ENST00000565908 TJP1Q07157 1748 aa31.94■■■□□ 2.7
TCF4-230ENST00000565908 HTATSF1O43719 755 aaKnown RBP31.93■■■□□ 2.7
TCF4-230ENST00000565908 RFC4P35249 363 aa31.92■■■□□ 2.7
TCF4-230ENST00000565908 ZNF790Q6PG37 636 aa31.92■■■□□ 2.7
TCF4-230ENST00000565908 INTS5Q6P9B9 1019 aaKnown RBP31.91■■■□□ 2.7
TCF4-230ENST00000565908 CYP19A1P11511 503 aaPredicted RBP31.9■■■□□ 2.7
TCF4-230ENST00000565908 PLEKHF1Q96S99 279 aa31.9■■■□□ 2.7
TCF4-230ENST00000565908 CCDC87Q9NVE4 849 aa31.9■■■□□ 2.7
TCF4-230ENST00000565908 MCM10Q7L590 875 aa31.89■■■□□ 2.7
TCF4-230ENST00000565908 BTBD11A6QL63 1104 aa31.88■■■□□ 2.69
TCF4-230ENST00000565908 NLGN1Q8N2Q7 840 aa31.88■■■□□ 2.69
TCF4-230ENST00000565908 MYH14Q7Z406 1995 aaKnown RBP31.88■■■□□ 2.69
TCF4-230ENST00000565908 ZNF496Q96IT1 587 aaPredicted RBP31.87■■■□□ 2.69
TCF4-230ENST00000565908 CD2APQ9Y5K6 639 aa31.87■■■□□ 2.69
TCF4-230ENST00000565908 UBR2Q8IWV8 1755 aa31.86■■■□□ 2.69
TCF4-230ENST00000565908 MAPK8IP3Q9UPT6 1336 aa31.86■■■□□ 2.69
TCF4-230ENST00000565908 NLGN2Q8NFZ4 835 aa31.86■■■□□ 2.69
TCF4-230ENST00000565908 SIPA1L3O60292 1781 aaPredicted RBP31.86■■■□□ 2.69
TCF4-230ENST00000565908 HEG1Q9ULI3 1381 aa31.85■■■□□ 2.69
TCF4-230ENST00000565908 FMNL2Q96PY5 1086 aa31.85■■■□□ 2.69
TCF4-230ENST00000565908 TEX13AQ9BXU3 409 aaPredicted RBP31.85■■■□□ 2.69
TCF4-230ENST00000565908 STARD3NLO95772 234 aa31.84■■■□□ 2.69
TCF4-230ENST00000565908 MMP10P09238 476 aa31.84■■■□□ 2.69
TCF4-230ENST00000565908 GYS1P13807 737 aa31.84■■■□□ 2.69
TCF4-230ENST00000565908 DCTN1Q14203 1278 aa31.84■■■□□ 2.69
TCF4-230ENST00000565908 PRKRIP1Q9H875 184 aaPredicted RBP31.84■■■□□ 2.69
TCF4-230ENST00000565908 SOS1Q07889 1333 aaPredicted RBP31.83■■■□□ 2.69
TCF4-230ENST00000565908 NFE2L2Q16236 605 aa31.83■■■□□ 2.69
TCF4-230ENST00000565908 USP42Q9H9J4 1324 aaKnown RBP31.81■■■□□ 2.68
TCF4-230ENST00000565908 ZBTB1Q9Y2K1 713 aa31.81■■■□□ 2.68
TCF4-230ENST00000565908 GPR162Q16538 588 aa31.8■■■□□ 2.68
TCF4-230ENST00000565908 KCNQ3O43525 872 aa31.79■■■□□ 2.68
TCF4-230ENST00000565908 TAF7Q15545 349 aaPredicted RBP31.78■■■□□ 2.68
TCF4-230ENST00000565908 SRP68Q9UHB9 627 aaKnown RBP31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms