RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
CAPN3-215ENST00000565559 PCDH10Q9P2E7 1040 aa15.9■□□□□ 0.14
CAPN3-215ENST00000565559 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
CAPN3-215ENST00000565559 PCNTO95613 3336 aa15.89■□□□□ 0.13
CAPN3-215ENST00000565559 C10orf71Q711Q0 1435 aa15.89■□□□□ 0.13
CAPN3-215ENST00000565559 FCHSD2O94868 740 aa15.89■□□□□ 0.13
CAPN3-215ENST00000565559 MMP10P09238 476 aa15.89■□□□□ 0.13
CAPN3-215ENST00000565559 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
CAPN3-215ENST00000565559 C4BP0C0L5 1744 aa15.88■□□□□ 0.13
CAPN3-215ENST00000565559 A0A0G2JLW4 131 aa15.88■□□□□ 0.13
CAPN3-215ENST00000565559 HDGFL2Q7Z4V5 671 aaPredicted RBP15.88■□□□□ 0.13
CAPN3-215ENST00000565559 AMIGO3Q86WK7 504 aa15.88■□□□□ 0.13
CAPN3-215ENST00000565559 RRAGCQ9HB90 399 aa15.88■□□□□ 0.13
CAPN3-215ENST00000565559 MEGF6O75095 1541 aa15.88■□□□□ 0.13
CAPN3-215ENST00000565559 SBNO2Q9Y2G9 1366 aa15.87■□□□□ 0.13
CAPN3-215ENST00000565559 RAPGEF4Q8WZA2 1011 aa15.87■□□□□ 0.13
CAPN3-215ENST00000565559 MON2Q7Z3U7 1717 aa15.87■□□□□ 0.13
CAPN3-215ENST00000565559 KCPQ6ZWJ8 1503 aa15.87■□□□□ 0.13
CAPN3-215ENST00000565559 AMPHP49418 695 aa15.86■□□□□ 0.13
CAPN3-215ENST00000565559 SMIM5Q71RC9 77 aa15.85■□□□□ 0.13
CAPN3-215ENST00000565559 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
CAPN3-215ENST00000565559 RNF181Q9P0P0 153 aa15.85■□□□□ 0.13
CAPN3-215ENST00000565559 PCDH11XQ9BZA7 1347 aa15.85■□□□□ 0.13
CAPN3-215ENST00000565559 PCDH11YQ9BZA8 1340 aa15.85■□□□□ 0.13
CAPN3-215ENST00000565559 GNPATO15228 680 aa15.84■□□□□ 0.13
CAPN3-215ENST00000565559 DPEP1P16444 411 aa15.84■□□□□ 0.13
CAPN3-215ENST00000565559 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
CAPN3-215ENST00000565559 HOXC9P31274 260 aa15.84■□□□□ 0.13
CAPN3-215ENST00000565559 CCDC87Q9NVE4 849 aa15.84■□□□□ 0.13
CAPN3-215ENST00000565559 TAF1LQ8IZX4 1826 aa15.84■□□□□ 0.13
CAPN3-215ENST00000565559 EDC4Q6P2E9 1401 aaKnown RBP15.84■□□□□ 0.13
CAPN3-215ENST00000565559 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.13
CAPN3-215ENST00000565559 NLGN1Q8N2Q7 840 aa15.82■□□□□ 0.12
CAPN3-215ENST00000565559 TERF2IPQ9NYB0 399 aa15.82■□□□□ 0.12
CAPN3-215ENST00000565559 HAX1O00165 279 aa15.81■□□□□ 0.12
CAPN3-215ENST00000565559 MAP3K19Q56UN5 1328 aa15.81■□□□□ 0.12
CAPN3-215ENST00000565559 UBR3Q6ZT12 1888 aa15.81■□□□□ 0.12
CAPN3-215ENST00000565559 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-215ENST00000565559 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
CAPN3-215ENST00000565559 CD163L1Q9NR16 1453 aa15.8■□□□□ 0.12
CAPN3-215ENST00000565559 SMG6Q86US8 1419 aaKnown RBP15.8■□□□□ 0.12
CAPN3-215ENST00000565559 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
CAPN3-215ENST00000565559 SIK1P57059 783 aa15.8■□□□□ 0.12
CAPN3-215ENST00000565559 TMF1P82094 1093 aa15.8■□□□□ 0.12
CAPN3-215ENST00000565559 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
CAPN3-215ENST00000565559 PIM2Q9P1W9 311 aa15.8■□□□□ 0.12
CAPN3-215ENST00000565559 DALRD3Q5D0E6 543 aaKnown RBP15.79■□□□□ 0.12
CAPN3-215ENST00000565559 NBPF6Q5VWK0 638 aa15.79■□□□□ 0.12
CAPN3-215ENST00000565559 COG3Q96JB2 828 aa15.79■□□□□ 0.12
CAPN3-215ENST00000565559 NBPF4Q96M43 638 aa15.79■□□□□ 0.12
CAPN3-215ENST00000565559 PARP3Q9Y6F1 533 aa15.79■□□□□ 0.12
CAPN3-215ENST00000565559 KIF13BQ9NQT8 1826 aa15.79■□□□□ 0.12
CAPN3-215ENST00000565559 N4BP2Q86UW6 1770 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-215ENST00000565559 ROCK2O75116 1388 aaKnown RBP15.78■□□□□ 0.12
CAPN3-215ENST00000565559 VEGFAP15692 232 aaPredicted RBP15.78■□□□□ 0.12
CAPN3-215ENST00000565559 TRAPPC3LQ5T215 181 aa15.78■□□□□ 0.12
CAPN3-215ENST00000565559 USHBP1Q8N6Y0 703 aa15.78■□□□□ 0.12
CAPN3-215ENST00000565559 DCAF5Q96JK2 942 aa15.78■□□□□ 0.12
CAPN3-215ENST00000565559 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.12
CAPN3-215ENST00000565559 KIAA1551Q9HCM1 1747 aa15.77■□□□□ 0.12
CAPN3-215ENST00000565559 RTL1A6NKG5 1358 aa15.77■□□□□ 0.12
CAPN3-215ENST00000565559 ZC3H4Q9UPT8 1303 aaKnown RBP15.77■□□□□ 0.12
CAPN3-215ENST00000565559 PIGBQ92521 554 aa15.77■□□□□ 0.12
CAPN3-215ENST00000565559 PRDM10Q9NQV6 1147 aa15.77■□□□□ 0.12
CAPN3-215ENST00000565559 ATP6V1AP38606 617 aa15.76■□□□□ 0.11
CAPN3-215ENST00000565559 SLC12A5Q9H2X9 1139 aa15.76■□□□□ 0.11
CAPN3-215ENST00000565559 RTCBQ9Y3I0 505 aaKnown RBP15.76■□□□□ 0.11
CAPN3-215ENST00000565559 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
CAPN3-215ENST00000565559 FAM161AQ3B820 660 aa15.75■□□□□ 0.11
CAPN3-215ENST00000565559 AIDAQ96BJ3 306 aa15.75■□□□□ 0.11
CAPN3-215ENST00000565559 CYP27B1O15528 508 aa15.74■□□□□ 0.11
CAPN3-215ENST00000565559 KCNA3P22001 575 aa15.74■□□□□ 0.11
CAPN3-215ENST00000565559 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
CAPN3-215ENST00000565559 ITPK1Q13572 414 aa15.73■□□□□ 0.11
CAPN3-215ENST00000565559 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
CAPN3-215ENST00000565559 GLTPD2A6NH11 291 aa15.72■□□□□ 0.11
CAPN3-215ENST00000565559 FOXN1O15353 648 aa15.72■□□□□ 0.11
CAPN3-215ENST00000565559 RFC4P35249 363 aa15.72■□□□□ 0.11
CAPN3-215ENST00000565559 CTCFP49711 727 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-215ENST00000565559 EVX2Q03828 476 aa15.72■□□□□ 0.11
CAPN3-215ENST00000565559 MKRN1Q9UHC7 482 aaKnown RBP15.72■□□□□ 0.11
CAPN3-215ENST00000565559 ARFGEF1Q9Y6D6 1849 aa15.72■□□□□ 0.11
CAPN3-215ENST00000565559 RGPD2P0DJD1 1756 aa15.72■□□□□ 0.11
CAPN3-215ENST00000565559 C4AP0C0L4 1744 aa15.71■□□□□ 0.11
CAPN3-215ENST00000565559 C19orf67A6NJJ6 358 aa15.7■□□□□ 0.1
CAPN3-215ENST00000565559 GYS1P13807 737 aa15.7■□□□□ 0.1
CAPN3-215ENST00000565559 FBLN1P23142 703 aa15.7■□□□□ 0.1
CAPN3-215ENST00000565559 L3MBTL2Q969R5 705 aa15.7■□□□□ 0.1
CAPN3-215ENST00000565559 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
CAPN3-215ENST00000565559 LMNB1P20700 586 aa15.69■□□□□ 0.1
CAPN3-215ENST00000565559 RRS1Q15050 365 aaKnown RBP15.69■□□□□ 0.1
CAPN3-215ENST00000565559 NKX1-1Q15270 411 aaPredicted RBP15.69■□□□□ 0.1
CAPN3-215ENST00000565559 ARHGEF1Q92888 912 aaKnown RBP15.69■□□□□ 0.1
CAPN3-215ENST00000565559 ASAP1Q9ULH1 1129 aa15.69■□□□□ 0.1
CAPN3-215ENST00000565559 SPG7Q9UQ90 795 aa15.69■□□□□ 0.1
CAPN3-215ENST00000565559 ITGB4P16144 1822 aa15.68■□□□□ 0.1
CAPN3-215ENST00000565559 MAP2P11137 1827 aaKnown RBP15.67■□□□□ 0.1
CAPN3-215ENST00000565559 CD44P16070 742 aaKnown RBP15.67■□□□□ 0.1
CAPN3-215ENST00000565559 RASSF7Q02833 373 aa15.67■□□□□ 0.1
CAPN3-215ENST00000565559 MLLT1Q03111 559 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms