RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 SPATA31A1Q5TZJ5 1347 aa12.02□□□□□ -0.49
CNEP1R1-206ENST00000565556 CYP27B1O15528 508 aa12.02□□□□□ -0.49
CNEP1R1-206ENST00000565556 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
CNEP1R1-206ENST00000565556 FNBP4Q8N3X1 1017 aaPredicted RBP12.02□□□□□ -0.49
CNEP1R1-206ENST00000565556 C8orf37Q96NL8 207 aa12.02□□□□□ -0.49
CNEP1R1-206ENST00000565556 BACH2Q9BYV9 841 aa12.02□□□□□ -0.49
CNEP1R1-206ENST00000565556 DISP2A7MBM2 1401 aa12.02□□□□□ -0.49
CNEP1R1-206ENST00000565556 SOS1Q07889 1333 aaPredicted RBP12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 VAMP4O75379 141 aa12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 TWISTNBQ3B726 338 aaPredicted RBP12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 LRP6O75581 1613 aa12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 SIPA1L3O60292 1781 aaPredicted RBP12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.01□□□□□ -0.49
CNEP1R1-206ENST00000565556 BCAR3O75815 825 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 NKX1-1Q15270 411 aaPredicted RBP12□□□□□ -0.49
CNEP1R1-206ENST00000565556 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 VPS72Q15906 364 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 BARGINQ6ZT62 677 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
CNEP1R1-206ENST00000565556 C8orf58Q8NAV2 365 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 DDRGK1Q96HY6 314 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 CHMP4AQ9BY43 222 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 MIS18AQ9NYP9 233 aa12□□□□□ -0.49
CNEP1R1-206ENST00000565556 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 KDM6AO15550 1401 aaPredicted RBP11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 BTBD11A6QL63 1104 aa11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 EXOC5O00471 708 aa11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 TSPYL6Q8N831 410 aa11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 SLC52A2Q9HAB3 445 aa11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 CCDC9Q9Y3X0 531 aaKnown RBP11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 MRC1P22897 1456 aa11.99□□□□□ -0.49
CNEP1R1-206ENST00000565556 ERVV-2B6SEH9 535 aa11.98□□□□□ -0.49
CNEP1R1-206ENST00000565556 CANXP27824 592 aaKnown RBP11.98□□□□□ -0.49
CNEP1R1-206ENST00000565556 DDX54Q8TDD1 881 aaKnown RBP11.98□□□□□ -0.49
CNEP1R1-206ENST00000565556 SSH1Q8WYL5 1049 aa11.98□□□□□ -0.49
CNEP1R1-206ENST00000565556 KIF16BQ96L93 1317 aa11.98□□□□□ -0.49
CNEP1R1-206ENST00000565556 ELL2O00472 640 aaPredicted RBP11.97□□□□□ -0.49
CNEP1R1-206ENST00000565556 PLIN1O60240 522 aa11.97□□□□□ -0.49
CNEP1R1-206ENST00000565556 USP21Q9UK80 565 aa11.97□□□□□ -0.49
CNEP1R1-206ENST00000565556 IPO8O15397 1037 aaKnown RBP11.97□□□□□ -0.49
CNEP1R1-206ENST00000565556 CABP4P57796 275 aa11.97□□□□□ -0.49
CNEP1R1-206ENST00000565556 PDE3AQ14432 1141 aa11.97□□□□□ -0.49
CNEP1R1-206ENST00000565556 TNS2Q63HR2 1409 aa11.96□□□□□ -0.49
CNEP1R1-206ENST00000565556 HOXB7P09629 217 aa11.96□□□□□ -0.49
CNEP1R1-206ENST00000565556 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.49
CNEP1R1-206ENST00000565556 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
CNEP1R1-206ENST00000565556 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
CNEP1R1-206ENST00000565556 CACNA1FO60840 1977 aa11.95□□□□□ -0.5
CNEP1R1-206ENST00000565556 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
CNEP1R1-206ENST00000565556 DDB1Q16531 1140 aa11.95□□□□□ -0.5
CNEP1R1-206ENST00000565556 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
CNEP1R1-206ENST00000565556 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
CNEP1R1-206ENST00000565556 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
CNEP1R1-206ENST00000565556 ARHGAP45Q92619 1136 aa11.94□□□□□ -0.5
CNEP1R1-206ENST00000565556 CRBNQ96SW2 442 aa11.94□□□□□ -0.5
CNEP1R1-206ENST00000565556 AFF2P51816 1311 aa11.94□□□□□ -0.5
CNEP1R1-206ENST00000565556 CCDC30Q5VVM6 783 aa11.94□□□□□ -0.5
CNEP1R1-206ENST00000565556 ZNF790Q6PG37 636 aa11.94□□□□□ -0.5
CNEP1R1-206ENST00000565556 TTC5Q8N0Z6 440 aa11.93□□□□□ -0.5
CNEP1R1-206ENST00000565556 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
CNEP1R1-206ENST00000565556 NOB1Q9ULX3 412 aaKnown RBP11.93□□□□□ -0.5
CNEP1R1-206ENST00000565556 HEG1Q9ULI3 1381 aa11.93□□□□□ -0.5
CNEP1R1-206ENST00000565556 C20orf194Q5TEA3 1177 aa11.92□□□□□ -0.5
CNEP1R1-206ENST00000565556 ATF7IPQ6VMQ6 1270 aa11.92□□□□□ -0.5
CNEP1R1-206ENST00000565556 TRPC5Q9UL62 973 aaPredicted RBP11.92□□□□□ -0.5
CNEP1R1-206ENST00000565556 KCNQ3O43525 872 aa11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 CENPQQ7L2Z9 268 aaPredicted RBP11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 KDM2BQ8NHM5 1336 aa11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 ATRNO75882 1429 aa11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 ITGB4P16144 1822 aa11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 GIGYF1O75420 1035 aaPredicted RBP11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 HDGFL1Q5TGJ6 251 aa11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 FBXO41Q8TF61 875 aa11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
CNEP1R1-206ENST00000565556 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
CNEP1R1-206ENST00000565556 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
CNEP1R1-206ENST00000565556 TRIM27P14373 513 aa11.9□□□□□ -0.5
CNEP1R1-206ENST00000565556 SLC39A6Q13433 755 aa11.9□□□□□ -0.5
CNEP1R1-206ENST00000565556 AAMPQ13685 434 aa11.9□□□□□ -0.5
CNEP1R1-206ENST00000565556 FMNL2Q96PY5 1086 aa11.9□□□□□ -0.5
CNEP1R1-206ENST00000565556 PTPRCP08575 1304 aa11.9□□□□□ -0.5
CNEP1R1-206ENST00000565556 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
CNEP1R1-206ENST00000565556 THSD7AQ9UPZ6 1657 aa11.89□□□□□ -0.51
CNEP1R1-206ENST00000565556 UBR2Q8IWV8 1755 aa11.89□□□□□ -0.51
CNEP1R1-206ENST00000565556 SNRPA1P09661 255 aaKnown RBP11.89□□□□□ -0.51
CNEP1R1-206ENST00000565556 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
CNEP1R1-206ENST00000565556 PANK1Q8TE04 598 aa11.89□□□□□ -0.51
CNEP1R1-206ENST00000565556 ZNF496Q96IT1 587 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms