RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 MSH5O43196 834 aa29.98■■■□□ 2.39
CDH11-211ENST00000565210 RBM42Q9BTD8 480 aaKnown RBP29.98■■■□□ 2.39
CDH11-211ENST00000565210 RNMTO43148 476 aaKnown RBP29.96■■■□□ 2.39
CDH11-211ENST00000565210 FCHSD2O94868 740 aa29.96■■■□□ 2.39
CDH11-211ENST00000565210 SRCAPQ6ZRS2 3230 aa29.96■■■□□ 2.39
CDH11-211ENST00000565210 NEFMP07197 916 aa29.95■■■□□ 2.39
CDH11-211ENST00000565210 POLD1P28340 1107 aa29.95■■■□□ 2.39
CDH11-211ENST00000565210 SLC52A2Q9HAB3 445 aa29.95■■■□□ 2.39
CDH11-211ENST00000565210 PRKAR2BP31323 418 aa29.94■■■□□ 2.38
CDH11-211ENST00000565210 PTGER2P43116 358 aa29.94■■■□□ 2.38
CDH11-211ENST00000565210 GNAT3A8MTJ3 354 aa29.93■■■□□ 2.38
CDH11-211ENST00000565210 RSPH6AQ9H0K4 717 aa29.93■■■□□ 2.38
CDH11-211ENST00000565210 LGR6Q9HBX8 967 aa29.93■■■□□ 2.38
CDH11-211ENST00000565210 DCAF8L1A6NGE4 600 aa29.91■■■□□ 2.38
CDH11-211ENST00000565210 COL23A1Q86Y22 540 aaPredicted RBP29.91■■■□□ 2.38
CDH11-211ENST00000565210 PNNQ9H307 717 aaKnown RBP29.91■■■□□ 2.38
CDH11-211ENST00000565210 QSER1Q2KHR3 1735 aa29.91■■■□□ 2.38
CDH11-211ENST00000565210 LINC00116Q8NCU8 138 aa29.9■■■□□ 2.38
CDH11-211ENST00000565210 C5P01031 1676 aa29.9■■■□□ 2.38
CDH11-211ENST00000565210 ARXQ96QS3 562 aa29.89■■■□□ 2.38
CDH11-211ENST00000565210 MAP3K5Q99683 1374 aa29.89■■■□□ 2.37
CDH11-211ENST00000565210 PTCD1O75127 700 aaKnown RBP29.88■■■□□ 2.37
CDH11-211ENST00000565210 SSFA2P28290 1259 aa29.88■■■□□ 2.37
CDH11-211ENST00000565210 TEFQ10587 303 aa29.88■■■□□ 2.37
CDH11-211ENST00000565210 ITPK1Q13572 414 aa29.88■■■□□ 2.37
CDH11-211ENST00000565210 SGIP1Q9BQI5 828 aa29.88■■■□□ 2.37
CDH11-211ENST00000565210 RC3H1Q5TC82 1133 aaKnown RBP29.86■■■□□ 2.37
CDH11-211ENST00000565210 GNPATO15228 680 aa29.85■■■□□ 2.37
CDH11-211ENST00000565210 RTF1Q92541 710 aaKnown RBP29.85■■■□□ 2.37
CDH11-211ENST00000565210 PHACTR3Q96KR7 559 aa29.85■■■□□ 2.37
CDH11-211ENST00000565210 C4BP0C0L5 1744 aa29.85■■■□□ 2.37
CDH11-211ENST00000565210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.84■■■□□ 2.37
CDH11-211ENST00000565210 PHF14O94880 888 aa29.84■■■□□ 2.37
CDH11-211ENST00000565210 RTCBQ9Y3I0 505 aaKnown RBP29.84■■■□□ 2.37
CDH11-211ENST00000565210 SCN11AQ9UI33 1791 aa29.84■■■□□ 2.37
CDH11-211ENST00000565210 TAF1LQ8IZX4 1826 aa29.84■■■□□ 2.37
CDH11-211ENST00000565210 MYBBP1AQ9BQG0 1328 aaKnown RBP29.83■■■□□ 2.37
CDH11-211ENST00000565210 TTC5Q8N0Z6 440 aa29.82■■■□□ 2.36
CDH11-211ENST00000565210 SLC4A9Q96Q91 983 aa29.82■■■□□ 2.36
CDH11-211ENST00000565210 CNTNAP4Q9C0A0 1308 aa29.81■■■□□ 2.36
CDH11-211ENST00000565210 TRAPPC3LQ5T215 181 aa29.81■■■□□ 2.36
CDH11-211ENST00000565210 IL17REQ8NFR9 667 aa29.81■■■□□ 2.36
CDH11-211ENST00000565210 MRC1P22897 1456 aa29.8■■■□□ 2.36
CDH11-211ENST00000565210 HTATSF1O43719 755 aaKnown RBP29.79■■■□□ 2.36
CDH11-211ENST00000565210 ADRA2BP18089 450 aa29.79■■■□□ 2.36
CDH11-211ENST00000565210 FHDC1Q9C0D6 1143 aaPredicted RBP29.79■■■□□ 2.36
CDH11-211ENST00000565210 ZNF831Q5JPB2 1677 aa29.79■■■□□ 2.36
CDH11-211ENST00000565210 SLC39A6Q13433 755 aa29.78■■■□□ 2.36
CDH11-211ENST00000565210 SYT17Q9BSW7 474 aa29.78■■■□□ 2.36
CDH11-211ENST00000565210 RPS6KA4O75676 772 aa29.77■■■□□ 2.36
CDH11-211ENST00000565210 VSIG10Q8N0Z9 540 aa29.77■■■□□ 2.36
CDH11-211ENST00000565210 TUBGCP6Q96RT7 1819 aa29.76■■■□□ 2.35
CDH11-211ENST00000565210 MAPK8IP3Q9UPT6 1336 aa29.75■■■□□ 2.35
CDH11-211ENST00000565210 MSL1Q68DK7 614 aa29.74■■■□□ 2.35
CDH11-211ENST00000565210 ADAMTS7Q9UKP4 1686 aa29.73■■■□□ 2.35
CDH11-211ENST00000565210 RFC4P35249 363 aa29.73■■■□□ 2.35
CDH11-211ENST00000565210 CRKLP46109 303 aaKnown RBP29.73■■■□□ 2.35
CDH11-211ENST00000565210 KLHL34Q8N239 644 aa29.73■■■□□ 2.35
CDH11-211ENST00000565210 CEMIPQ8WUJ3 1361 aa29.73■■■□□ 2.35
CDH11-211ENST00000565210 BTBD11A6QL63 1104 aa29.72■■■□□ 2.35
CDH11-211ENST00000565210 ZNF790Q6PG37 636 aa29.72■■■□□ 2.35
CDH11-211ENST00000565210 AMIGO3Q86WK7 504 aa29.72■■■□□ 2.35
CDH11-211ENST00000565210 TEX13AQ9BXU3 409 aaPredicted RBP29.72■■■□□ 2.35
CDH11-211ENST00000565210 ZNF316A6NFI3 1004 aaPredicted RBP29.71■■■□□ 2.35
CDH11-211ENST00000565210 DNAJC10Q8IXB1 793 aa29.71■■■□□ 2.35
CDH11-211ENST00000565210 PRKRIP1Q9H875 184 aaPredicted RBP29.71■■■□□ 2.35
CDH11-211ENST00000565210 ARHGEF1Q92888 912 aaKnown RBP29.7■■■□□ 2.35
CDH11-211ENST00000565210 UBR3Q6ZT12 1888 aa29.7■■■□□ 2.34
CDH11-211ENST00000565210 STARD3NLO95772 234 aa29.69■■■□□ 2.34
CDH11-211ENST00000565210 SMIM5Q71RC9 77 aa29.69■■■□□ 2.34
CDH11-211ENST00000565210 NLGN1Q8N2Q7 840 aa29.69■■■□□ 2.34
CDH11-211ENST00000565210 PLEKHF1Q96S99 279 aa29.69■■■□□ 2.34
CDH11-211ENST00000565210 WDR43Q15061 677 aaKnown RBP eCLIP29.68■■■□□ 2.34
CDH11-211ENST00000565210 MCM10Q7L590 875 aa29.68■■■□□ 2.34
CDH11-211ENST00000565210 FMNL2Q96PY5 1086 aa29.68■■■□□ 2.34
CDH11-211ENST00000565210 CCDC87Q9NVE4 849 aa29.68■■■□□ 2.34
CDH11-211ENST00000565210 CYP19A1P11511 503 aaPredicted RBP29.66■■■□□ 2.34
CDH11-211ENST00000565210 NFE2L2Q16236 605 aa29.66■■■□□ 2.34
CDH11-211ENST00000565210 COL24A1Q17RW2 1714 aa29.65■■■□□ 2.34
CDH11-211ENST00000565210 VIRMAQ69YN4 1812 aaKnown RBP29.64■■■□□ 2.34
CDH11-211ENST00000565210 TAF7Q15545 349 aaPredicted RBP29.64■■■□□ 2.34
CDH11-211ENST00000565210 INTS5Q6P9B9 1019 aaKnown RBP29.64■■■□□ 2.34
CDH11-211ENST00000565210 ZNF496Q96IT1 587 aaPredicted RBP29.64■■■□□ 2.34
CDH11-211ENST00000565210 COL5A3P25940 1745 aaPredicted RBP29.63■■■□□ 2.33
CDH11-211ENST00000565210 PNISRQ8TF01 805 aaKnown RBP29.63■■■□□ 2.33
CDH11-211ENST00000565210 CD2APQ9Y5K6 639 aa29.63■■■□□ 2.33
CDH11-211ENST00000565210 HEG1Q9ULI3 1381 aa29.63■■■□□ 2.33
CDH11-211ENST00000565210 KCPQ6ZWJ8 1503 aa29.62■■■□□ 2.33
CDH11-211ENST00000565210 DCTN1Q14203 1278 aa29.62■■■□□ 2.33
CDH11-211ENST00000565210 CICQ96RK0 1608 aaPredicted RBP29.61■■■□□ 2.33
CDH11-211ENST00000565210 NPM2Q86SE8 214 aaKnown RBP29.61■■■□□ 2.33
CDH11-211ENST00000565210 ZPR1O75312 459 aa29.6■■■□□ 2.33
CDH11-211ENST00000565210 LMOD3Q0VAK6 560 aa29.59■■■□□ 2.33
CDH11-211ENST00000565210 MMP10P09238 476 aa29.58■■■□□ 2.33
CDH11-211ENST00000565210 GYS1P13807 737 aa29.58■■■□□ 2.33
CDH11-211ENST00000565210 TJP1Q07157 1748 aa29.57■■■□□ 2.32
CDH11-211ENST00000565210 SOS1Q07889 1333 aaPredicted RBP29.57■■■□□ 2.32
CDH11-211ENST00000565210 A0A087WZG4 1122 aa29.56■■■□□ 2.32
CDH11-211ENST00000565210 CANXP27824 592 aaKnown RBP29.56■■■□□ 2.32
CDH11-211ENST00000565210 RIPK4P57078 832 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms