RNA–Protein interactions for RNA: ENST00000564988.5

TM6SF1-206, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 4

Gene TM6SF1, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-206ENST00000564988 SENP3-EIF4A1A0A087X0R7 540 aa32.02■■■□□ 2.72
TM6SF1-206ENST00000564988 BTAF1O14981 1849 aa32.01■■■□□ 2.72
TM6SF1-206ENST00000564988 UPF1Q92900 1129 aaKnown RBP eCLIP32.01■■■□□ 2.71
TM6SF1-206ENST00000564988 THUMPD2Q9BTF0 503 aaKnown RBP32.01■■■□□ 2.71
TM6SF1-206ENST00000564988 APBA3O96018 575 aa31.99■■■□□ 2.71
TM6SF1-206ENST00000564988 CALD1Q05682 793 aaKnown RBP31.98■■■□□ 2.71
TM6SF1-206ENST00000564988 SALL2Q9Y467 1007 aaPredicted RBP31.98■■■□□ 2.71
TM6SF1-206ENST00000564988 SIPA1L3O60292 1781 aaPredicted RBP31.97■■■□□ 2.71
TM6SF1-206ENST00000564988 TAF7Q15545 349 aaPredicted RBP31.96■■■□□ 2.71
TM6SF1-206ENST00000564988 WWC1Q8IX03 1113 aa31.96■■■□□ 2.71
TM6SF1-206ENST00000564988 SMARCC1Q92922 1105 aaPredicted RBP31.96■■■□□ 2.71
TM6SF1-206ENST00000564988 BAG6P46379 1132 aa31.95■■■□□ 2.71
TM6SF1-206ENST00000564988 BTBD11A6QL63 1104 aa31.93■■■□□ 2.7
TM6SF1-206ENST00000564988 ATG3Q9NT62 314 aa31.93■■■□□ 2.7
TM6SF1-206ENST00000564988 ASAP1Q9ULH1 1129 aa31.93■■■□□ 2.7
TM6SF1-206ENST00000564988 PLSCR1O15162 318 aa31.92■■■□□ 2.7
TM6SF1-206ENST00000564988 PALLDQ8WX93 1383 aa31.92■■■□□ 2.7
TM6SF1-206ENST00000564988 PAPPAQ13219 1627 aa31.91■■■□□ 2.7
TM6SF1-206ENST00000564988 RGPD3A6NKT7 1758 aaPredicted RBP31.9■■■□□ 2.7
TM6SF1-206ENST00000564988 RGPD4Q7Z3J3 1758 aa31.9■■■□□ 2.7
TM6SF1-206ENST00000564988 TTC5Q8N0Z6 440 aa31.9■■■□□ 2.7
TM6SF1-206ENST00000564988 BABAM1Q9NWV8 329 aa31.9■■■□□ 2.7
TM6SF1-206ENST00000564988 HNRNPUQ00839 825 aaKnown RBP eCLIP31.89■■■□□ 2.7
TM6SF1-206ENST00000564988 SLC39A6Q13433 755 aa31.88■■■□□ 2.69
TM6SF1-206ENST00000564988 ZNF790Q6PG37 636 aa31.88■■■□□ 2.69
TM6SF1-206ENST00000564988 WDR63Q8IWG1 891 aa31.88■■■□□ 2.69
TM6SF1-206ENST00000564988 IL16Q14005 1332 aa31.87■■■□□ 2.69
TM6SF1-206ENST00000564988 GNAI1P63096 354 aa31.86■■■□□ 2.69
TM6SF1-206ENST00000564988 CFAP44Q96MT7 982 aa31.86■■■□□ 2.69
TM6SF1-206ENST00000564988 IFT57Q9NWB7 429 aa31.86■■■□□ 2.69
TM6SF1-206ENST00000564988 TSPYL4Q9UJ04 414 aa31.86■■■□□ 2.69
TM6SF1-206ENST00000564988 LAS1LQ9Y4W2 734 aaKnown RBP31.86■■■□□ 2.69
TM6SF1-206ENST00000564988 ZNF521Q96K83 1311 aa31.85■■■□□ 2.69
TM6SF1-206ENST00000564988 EN1Q05925 392 aaPredicted RBP31.85■■■□□ 2.69
TM6SF1-206ENST00000564988 DEFB132Q7Z7B7 95 aa31.85■■■□□ 2.69
TM6SF1-206ENST00000564988 MIS18AQ9NYP9 233 aa31.85■■■□□ 2.69
TM6SF1-206ENST00000564988 LY75O60449 1722 aa31.84■■■□□ 2.69
TM6SF1-206ENST00000564988 CAMKK2Q96RR4 588 aa31.84■■■□□ 2.69
TM6SF1-206ENST00000564988 KDM3BQ7LBC6 1761 aa31.84■■■□□ 2.69
TM6SF1-206ENST00000564988 CHL1O00533 1208 aa31.83■■■□□ 2.69
TM6SF1-206ENST00000564988 KCPQ6ZWJ8 1503 aa31.82■■■□□ 2.68
TM6SF1-206ENST00000564988 SOCS7O14512 581 aa31.82■■■□□ 2.68
TM6SF1-206ENST00000564988 PTCD1O75127 700 aaKnown RBP31.82■■■□□ 2.68
TM6SF1-206ENST00000564988 ZNF853P0CG23 659 aa31.82■■■□□ 2.68
TM6SF1-206ENST00000564988 RBM42Q9BTD8 480 aaKnown RBP31.82■■■□□ 2.68
TM6SF1-206ENST00000564988 UBR2Q8IWV8 1755 aa31.81■■■□□ 2.68
TM6SF1-206ENST00000564988 LOC102724428A0A0B4J2F2 783 aa31.81■■■□□ 2.68
TM6SF1-206ENST00000564988 SIK1P57059 783 aa31.81■■■□□ 2.68
TM6SF1-206ENST00000564988 EZH2Q15910 746 aaKnown RBP31.81■■■□□ 2.68
TM6SF1-206ENST00000564988 TXNRD1Q16881 649 aa31.81■■■□□ 2.68
TM6SF1-206ENST00000564988 SLC27A3Q5K4L6 730 aa31.81■■■□□ 2.68
TM6SF1-206ENST00000564988 KCNQ3O43525 872 aa31.8■■■□□ 2.68
TM6SF1-206ENST00000564988 FMNL2Q96PY5 1086 aa31.8■■■□□ 2.68
TM6SF1-206ENST00000564988 CCNL1Q9UK58 526 aaPredicted RBP31.8■■■□□ 2.68
TM6SF1-206ENST00000564988 ZNF496Q96IT1 587 aaPredicted RBP31.78■■■□□ 2.68
TM6SF1-206ENST00000564988 GOLGA2Q08379 1002 aa31.77■■■□□ 2.68
TM6SF1-206ENST00000564988 PROM2Q8N271 834 aa31.77■■■□□ 2.68
TM6SF1-206ENST00000564988 MBIPQ9NS73 344 aa31.77■■■□□ 2.68
TM6SF1-206ENST00000564988 ZNF831Q5JPB2 1677 aa31.76■■■□□ 2.68
TM6SF1-206ENST00000564988 HMGB2P26583 209 aaKnown RBP31.76■■■□□ 2.67
TM6SF1-206ENST00000564988 ATP6V1AP38606 617 aa31.76■■■□□ 2.67
TM6SF1-206ENST00000564988 VSIG10Q8N0Z9 540 aa31.76■■■□□ 2.67
TM6SF1-206ENST00000564988 HEG1Q9ULI3 1381 aa31.76■■■□□ 2.67
TM6SF1-206ENST00000564988 EIF4A1P60842 406 aaKnown RBP31.75■■■□□ 2.67
TM6SF1-206ENST00000564988 RREB1Q92766 1687 aa31.75■■■□□ 2.67
TM6SF1-206ENST00000564988 ZBED9Q6R2W3 1325 aa31.75■■■□□ 2.67
TM6SF1-206ENST00000564988 MYH16Q9H6N6 1097 aa31.74■■■□□ 2.67
TM6SF1-206ENST00000564988 SLC4A9Q96Q91 983 aa31.73■■■□□ 2.67
TM6SF1-206ENST00000564988 CICQ96RK0 1608 aaPredicted RBP31.72■■■□□ 2.67
TM6SF1-206ENST00000564988 LRRC4BQ9NT99 713 aa31.72■■■□□ 2.67
TM6SF1-206ENST00000564988 E9PSI1 815 aa31.71■■■□□ 2.67
TM6SF1-206ENST00000564988 SNRPA1P09661 255 aaKnown RBP31.7■■■□□ 2.67
TM6SF1-206ENST00000564988 KCNQ4P56696 695 aa31.7■■■□□ 2.67
TM6SF1-206ENST00000564988 ITPK1Q13572 414 aa31.7■■■□□ 2.67
TM6SF1-206ENST00000564988 TSR2Q969E8 191 aaKnown RBP31.7■■■□□ 2.67
TM6SF1-206ENST00000564988 TEX13AQ9BXU3 409 aaPredicted RBP31.7■■■□□ 2.67
TM6SF1-206ENST00000564988 SPINK5Q9NQ38 1064 aaPredicted RBP31.7■■■□□ 2.67
TM6SF1-206ENST00000564988 FANCIQ9NVI1 1328 aa31.69■■■□□ 2.66
TM6SF1-206ENST00000564988 TJP1Q07157 1748 aa31.69■■■□□ 2.66
TM6SF1-206ENST00000564988 C5P01031 1676 aa31.67■■■□□ 2.66
TM6SF1-206ENST00000564988 NUP188Q5SRE5 1749 aa31.67■■■□□ 2.66
TM6SF1-206ENST00000564988 DNAJC10Q8IXB1 793 aa31.67■■■□□ 2.66
TM6SF1-206ENST00000564988 SLFN5Q08AF3 891 aa31.66■■■□□ 2.66
TM6SF1-206ENST00000564988 GIGYF1O75420 1035 aaPredicted RBP31.65■■■□□ 2.66
TM6SF1-206ENST00000564988 LINC00116Q8NCU8 138 aa31.65■■■□□ 2.66
TM6SF1-206ENST00000564988 TAF1LQ8IZX4 1826 aa31.64■■■□□ 2.66
TM6SF1-206ENST00000564988 STARD3NLO95772 234 aa31.64■■■□□ 2.66
TM6SF1-206ENST00000564988 CDCA7LQ96GN5 454 aa31.63■■■□□ 2.65
TM6SF1-206ENST00000564988 COL5A3P25940 1745 aaPredicted RBP31.63■■■□□ 2.65
TM6SF1-206ENST00000564988 HOXB7P09629 217 aa31.62■■■□□ 2.65
TM6SF1-206ENST00000564988 KRT24Q2M2I5 525 aa31.62■■■□□ 2.65
TM6SF1-206ENST00000564988 YTHDC1Q96MU7 727 aaKnown RBP31.62■■■□□ 2.65
TM6SF1-206ENST00000564988 PRAMEF22A3QJZ6 481 aa31.61■■■□□ 2.65
TM6SF1-206ENST00000564988 CYP19A1P11511 503 aaPredicted RBP31.61■■■□□ 2.65
TM6SF1-206ENST00000564988 C4BP0C0L5 1744 aa31.61■■■□□ 2.65
TM6SF1-206ENST00000564988 SOS1Q07889 1333 aaPredicted RBP31.6■■■□□ 2.65
TM6SF1-206ENST00000564988 CNTNAP4Q9C0A0 1308 aa31.6■■■□□ 2.65
TM6SF1-206ENST00000564988 NBPF14Q5TI25 921 aa31.6■■■□□ 2.65
TM6SF1-206ENST00000564988 DUSP27Q5VZP5 1158 aa31.6■■■□□ 2.65
TM6SF1-206ENST00000564988 LAMB4A4D0S4 1761 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms