RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KRT24Q2M2I5 525 aa19.81■□□□□ 0.76
LINC00554-201ENST00000564841 TBX22Q9Y458 520 aa19.81■□□□□ 0.76
LINC00554-201ENST00000564841 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
LINC00554-201ENST00000564841 FER1L4A9Z1Z3 1794 aa19.8■□□□□ 0.76
LINC00554-201ENST00000564841 PIBF1Q8WXW3 757 aa19.8■□□□□ 0.76
LINC00554-201ENST00000564841 GTPBP4Q9BZE4 634 aaKnown RBP19.8■□□□□ 0.76
LINC00554-201ENST00000564841 CHMP4BQ9H444 224 aaKnown RBP19.8■□□□□ 0.76
LINC00554-201ENST00000564841 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
LINC00554-201ENST00000564841 GCC1Q96CN9 775 aa19.79■□□□□ 0.76
LINC00554-201ENST00000564841 USP32Q8NFA0 1604 aa19.79■□□□□ 0.76
LINC00554-201ENST00000564841 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
LINC00554-201ENST00000564841 CGNQ9P2M7 1197 aaKnown RBP19.79■□□□□ 0.76
LINC00554-201ENST00000564841 ATP7BP35670 1465 aa19.79■□□□□ 0.76
LINC00554-201ENST00000564841 CT47B1P0C2W7 299 aaPredicted RBP19.78■□□□□ 0.76
LINC00554-201ENST00000564841 PDCL2Q8N4E4 241 aa19.78■□□□□ 0.76
LINC00554-201ENST00000564841 CPSF1Q10570 1443 aaKnown RBP19.78■□□□□ 0.76
LINC00554-201ENST00000564841 LTV1Q96GA3 475 aaPredicted RBP19.78■□□□□ 0.76
LINC00554-201ENST00000564841 SULT6B1Q6IMI4 303 aa19.78■□□□□ 0.76
LINC00554-201ENST00000564841 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
LINC00554-201ENST00000564841 FCHSD2O94868 740 aa19.77■□□□□ 0.76
LINC00554-201ENST00000564841 ADCY5O95622 1261 aa19.77■□□□□ 0.76
LINC00554-201ENST00000564841 TMEM51Q9NW97 253 aa19.77■□□□□ 0.76
LINC00554-201ENST00000564841 SIRT1Q96EB6 747 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 PRIMPOLQ96LW4 560 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 DTNBO60941 627 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 KIF20AO95235 890 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 IL13P35225 146 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 NLRP6P59044 892 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 LMOD2Q6P5Q4 547 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 CWC22Q9HCG8 908 aaKnown RBP19.76■□□□□ 0.75
LINC00554-201ENST00000564841 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
LINC00554-201ENST00000564841 HMGN5P82970 282 aaKnown RBP19.76■□□□□ 0.75
LINC00554-201ENST00000564841 RIOK3O14730 519 aaKnown RBP19.75■□□□□ 0.75
LINC00554-201ENST00000564841 ST18O60284 1047 aa19.75■□□□□ 0.75
LINC00554-201ENST00000564841 C8orf58Q8NAV2 365 aa19.75■□□□□ 0.75
LINC00554-201ENST00000564841 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.75■□□□□ 0.75
LINC00554-201ENST00000564841 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
LINC00554-201ENST00000564841 TECPR2O15040 1411 aa19.74■□□□□ 0.75
LINC00554-201ENST00000564841 LETM1O95202 739 aaPredicted RBP19.74■□□□□ 0.75
LINC00554-201ENST00000564841 SDSP20132 328 aa19.74■□□□□ 0.75
LINC00554-201ENST00000564841 GTF2F1P35269 517 aaKnown RBP eCLIP19.74■□□□□ 0.75
LINC00554-201ENST00000564841 NEK4P51957 841 aa19.74■□□□□ 0.75
LINC00554-201ENST00000564841 COL3A1P02461 1466 aaPredicted RBP19.74■□□□□ 0.75
LINC00554-201ENST00000564841 TTC22Q5TAA0 569 aa19.73■□□□□ 0.75
LINC00554-201ENST00000564841 TMX3Q96JJ7 454 aa19.73■□□□□ 0.75
LINC00554-201ENST00000564841 MBIPQ9NS73 344 aa19.73■□□□□ 0.75
LINC00554-201ENST00000564841 PYCARDQ9ULZ3 195 aa19.73■□□□□ 0.75
LINC00554-201ENST00000564841 VAMP4O75379 141 aa19.72■□□□□ 0.75
LINC00554-201ENST00000564841 AMPHP49418 695 aa19.72■□□□□ 0.75
LINC00554-201ENST00000564841 EIF4A2Q14240 407 aaKnown RBP19.72■□□□□ 0.75
LINC00554-201ENST00000564841 NAA30Q147X3 362 aaPredicted RBP19.72■□□□□ 0.75
LINC00554-201ENST00000564841 ZNF771Q7L3S4 317 aaPredicted RBP19.72■□□□□ 0.75
LINC00554-201ENST00000564841 MIS18AQ9NYP9 233 aa19.72■□□□□ 0.75
LINC00554-201ENST00000564841 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 FKBP5Q13451 457 aaPredicted RBP19.71■□□□□ 0.75
LINC00554-201ENST00000564841 ABTB2Q8N961 1025 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 SPC24Q8NBT2 197 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 MBD3O95983 291 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 NAP1L2Q9ULW6 460 aaPredicted RBP19.71■□□□□ 0.75
LINC00554-201ENST00000564841 KIF20BQ96Q89 1820 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 RIMS1Q86UR5 1692 aaKnown RBP19.7■□□□□ 0.74
LINC00554-201ENST00000564841 NFE2L2Q16236 605 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 ESCO1Q5FWF5 840 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 PLCD3Q8N3E9 789 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 AP5Z1O43299 807 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 USP48Q86UV5 1035 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 INTS3Q68E01 1043 aaKnown RBP19.69■□□□□ 0.74
LINC00554-201ENST00000564841 TWISTNBQ3B726 338 aaPredicted RBP19.69■□□□□ 0.74
LINC00554-201ENST00000564841 TSHZ3Q63HK5 1081 aa19.69■□□□□ 0.74
LINC00554-201ENST00000564841 MRPL50Q8N5N7 158 aaKnown RBP19.69■□□□□ 0.74
LINC00554-201ENST00000564841 MED14O60244 1454 aa19.69■□□□□ 0.74
LINC00554-201ENST00000564841 BRD1O95696 1058 aa19.68■□□□□ 0.74
LINC00554-201ENST00000564841 MCM10Q7L590 875 aa19.68■□□□□ 0.74
LINC00554-201ENST00000564841 KCNF1Q9H3M0 494 aa19.68■□□□□ 0.74
LINC00554-201ENST00000564841 CDC42BPGQ6DT37 1551 aa19.68■□□□□ 0.74
LINC00554-201ENST00000564841 MAP3K19Q56UN5 1328 aa19.67■□□□□ 0.74
LINC00554-201ENST00000564841 LRRC7Q96NW7 1537 aa19.67■□□□□ 0.74
LINC00554-201ENST00000564841 USP6P35125 1406 aa19.67■□□□□ 0.74
LINC00554-201ENST00000564841 ALDH1L2Q3SY69 923 aa19.66■□□□□ 0.74
LINC00554-201ENST00000564841 PALD1Q9ULE6 856 aa19.66■□□□□ 0.74
LINC00554-201ENST00000564841 FOXO3O43524 673 aa19.66■□□□□ 0.74
LINC00554-201ENST00000564841 SPTLC3Q9NUV7 552 aa19.66■□□□□ 0.74
LINC00554-201ENST00000564841 UPF3BQ9BZI7 483 aaKnown RBP19.65■□□□□ 0.74
LINC00554-201ENST00000564841 ARHGAP23Q9P227 1491 aa19.65■□□□□ 0.74
LINC00554-201ENST00000564841 LARP6Q9BRS8 491 aaKnown RBP19.64■□□□□ 0.73
LINC00554-201ENST00000564841 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
LINC00554-201ENST00000564841 PSME1Q06323 249 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 NECTIN2Q92692 538 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 ANKRD26Q9UPS8 1709 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 SLIT1O75093 1534 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 GIMAP6Q6P9H5 292 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 ANKRD7Q92527 254 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 RGPD8O14715 1765 aaPredicted RBP19.63■□□□□ 0.73
LINC00554-201ENST00000564841 KIAA1524Q8TCG1 905 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 DNAJC5Q9H3Z4 198 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 DCTPP1Q9H773 170 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 CNPY2Q9Y2B0 182 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 ORAI2Q96SN7 254 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 PHF8Q9UPP1 1060 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms