RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 CT47B1P0C2W7 299 aaPredicted RBP9.79□□□□□ -0.84
GINS3-205ENST00000564814 DUSP27Q5VZP5 1158 aa9.79□□□□□ -0.84
GINS3-205ENST00000564814 CCDC125Q86Z20 511 aa9.79□□□□□ -0.84
GINS3-205ENST00000564814 UBR2Q8IWV8 1755 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 ZNF831Q5JPB2 1677 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 ITGB4P16144 1822 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 ERVV-2B6SEH9 535 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 CHL1O00533 1208 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 RNMTO43148 476 aaKnown RBP9.78□□□□□ -0.84
GINS3-205ENST00000564814 GNAI1P63096 354 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 DDB1Q16531 1140 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 DEFB132Q7Z7B7 95 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
GINS3-205ENST00000564814 CEP350Q5VT06 3117 aa9.78□□□□□ -0.84
GINS3-205ENST00000564814 SF3B2Q13435 895 aaKnown RBP9.77□□□□□ -0.85
GINS3-205ENST00000564814 KRT27Q7Z3Y8 459 aa9.77□□□□□ -0.85
GINS3-205ENST00000564814 ZNF428Q96B54 188 aa9.77□□□□□ -0.85
GINS3-205ENST00000564814 MYH16Q9H6N6 1097 aa9.77□□□□□ -0.85
GINS3-205ENST00000564814 RRP7AQ9Y3A4 280 aaKnown RBP9.77□□□□□ -0.85
GINS3-205ENST00000564814 SBF2Q86WG5 1849 aa9.77□□□□□ -0.85
GINS3-205ENST00000564814 NHSQ6T4R5 1651 aa9.77□□□□□ -0.85
GINS3-205ENST00000564814 HEG1Q9ULI3 1381 aa9.76□□□□□ -0.85
GINS3-205ENST00000564814 DOT1LQ8TEK3 1739 aa9.76□□□□□ -0.85
GINS3-205ENST00000564814 CACNA1FO60840 1977 aa9.76□□□□□ -0.85
GINS3-205ENST00000564814 TAF7Q15545 349 aaPredicted RBP9.76□□□□□ -0.85
GINS3-205ENST00000564814 FAM98CQ17RN3 349 aaKnown RBP9.76□□□□□ -0.85
GINS3-205ENST00000564814 SLC52A2Q9HAB3 445 aa9.76□□□□□ -0.85
GINS3-205ENST00000564814 USP35Q9P2H5 1018 aa9.76□□□□□ -0.85
GINS3-205ENST00000564814 HOXB7P09629 217 aa9.75□□□□□ -0.85
GINS3-205ENST00000564814 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
GINS3-205ENST00000564814 MCM10Q7L590 875 aa9.75□□□□□ -0.85
GINS3-205ENST00000564814 SPINK5Q9NQ38 1064 aaPredicted RBP9.75□□□□□ -0.85
GINS3-205ENST00000564814 TEFQ10587 303 aa9.74□□□□□ -0.85
GINS3-205ENST00000564814 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
GINS3-205ENST00000564814 MARCH10Q8NA82 808 aaPredicted RBP9.74□□□□□ -0.85
GINS3-205ENST00000564814 YTHDC1Q96MU7 727 aaKnown RBP9.74□□□□□ -0.85
GINS3-205ENST00000564814 LGR6Q9HBX8 967 aa9.74□□□□□ -0.85
GINS3-205ENST00000564814 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
GINS3-205ENST00000564814 CENPBP07199 599 aaPredicted RBP9.73□□□□□ -0.85
GINS3-205ENST00000564814 BRPF1P55201 1214 aaPredicted RBP9.73□□□□□ -0.85
GINS3-205ENST00000564814 DCTN1Q14203 1278 aa9.73□□□□□ -0.85
GINS3-205ENST00000564814 MPRIPQ6WCQ1 1025 aa9.73□□□□□ -0.85
GINS3-205ENST00000564814 CDCA7LQ96GN5 454 aa9.73□□□□□ -0.85
GINS3-205ENST00000564814 MBIPQ9NS73 344 aa9.73□□□□□ -0.85
GINS3-205ENST00000564814 LAMB4A4D0S4 1761 aa9.73□□□□□ -0.85
GINS3-205ENST00000564814 RGPD3A6NKT7 1758 aaPredicted RBP9.73□□□□□ -0.85
GINS3-205ENST00000564814 RGPD4Q7Z3J3 1758 aa9.73□□□□□ -0.85
GINS3-205ENST00000564814 KCPQ6ZWJ8 1503 aa9.72□□□□□ -0.85
GINS3-205ENST00000564814 THUMPD2Q9BTF0 503 aaKnown RBP9.72□□□□□ -0.85
GINS3-205ENST00000564814 CHMP4AQ9BY43 222 aa9.72□□□□□ -0.85
GINS3-205ENST00000564814 BAG6P46379 1132 aa9.71□□□□□ -0.86
GINS3-205ENST00000564814 ZNF790Q6PG37 636 aa9.71□□□□□ -0.86
GINS3-205ENST00000564814 DDX54Q8TDD1 881 aaKnown RBP9.71□□□□□ -0.86
GINS3-205ENST00000564814 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
GINS3-205ENST00000564814 RNF123Q5XPI4 1314 aa9.71□□□□□ -0.86
GINS3-205ENST00000564814 LY75O60449 1722 aa9.7□□□□□ -0.86
GINS3-205ENST00000564814 BTBD11A6QL63 1104 aa9.7□□□□□ -0.86
GINS3-205ENST00000564814 EIF4A1P60842 406 aaKnown RBP9.7□□□□□ -0.86
GINS3-205ENST00000564814 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
GINS3-205ENST00000564814 TSPYL4Q9UJ04 414 aa9.7□□□□□ -0.86
GINS3-205ENST00000564814 BTAF1O14981 1849 aa9.7□□□□□ -0.86
GINS3-205ENST00000564814 PSDA5PKW4 1024 aaPredicted RBP9.69□□□□□ -0.86
GINS3-205ENST00000564814 CABP4P57796 275 aa9.69□□□□□ -0.86
GINS3-205ENST00000564814 EN1Q05925 392 aaPredicted RBP9.69□□□□□ -0.86
GINS3-205ENST00000564814 ALDH1L2Q3SY69 923 aa9.69□□□□□ -0.86
GINS3-205ENST00000564814 FAM196AQ6ZSG2 479 aa9.69□□□□□ -0.86
GINS3-205ENST00000564814 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
GINS3-205ENST00000564814 TMOD3Q9NYL9 352 aa9.69□□□□□ -0.86
GINS3-205ENST00000564814 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
GINS3-205ENST00000564814 RREB1Q92766 1687 aa9.68□□□□□ -0.86
GINS3-205ENST00000564814 ERBB4Q15303 1308 aa9.68□□□□□ -0.86
GINS3-205ENST00000564814 VAMP4O75379 141 aa9.68□□□□□ -0.86
GINS3-205ENST00000564814 PIGBQ92521 554 aa9.68□□□□□ -0.86
GINS3-205ENST00000564814 TSR2Q969E8 191 aaKnown RBP9.68□□□□□ -0.86
GINS3-205ENST00000564814 TNS1Q9HBL0 1735 aaKnown RBP9.68□□□□□ -0.86
GINS3-205ENST00000564814 C5P01031 1676 aa9.67□□□□□ -0.86
GINS3-205ENST00000564814 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
GINS3-205ENST00000564814 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
GINS3-205ENST00000564814 EXOSC9Q06265 439 aaKnown RBP9.67□□□□□ -0.86
GINS3-205ENST00000564814 TWISTNBQ3B726 338 aaPredicted RBP9.67□□□□□ -0.86
GINS3-205ENST00000564814 SMARCC1Q92922 1105 aaPredicted RBP9.67□□□□□ -0.86
GINS3-205ENST00000564814 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
GINS3-205ENST00000564814 COL5A3P25940 1745 aaPredicted RBP9.67□□□□□ -0.86
GINS3-205ENST00000564814 TJP1Q07157 1748 aa9.67□□□□□ -0.86
GINS3-205ENST00000564814 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
GINS3-205ENST00000564814 C1QTNF8P60827 252 aa9.66□□□□□ -0.86
GINS3-205ENST00000564814 EZH2Q15910 746 aaKnown RBP9.66□□□□□ -0.86
GINS3-205ENST00000564814 TEX13AQ9BXU3 409 aaPredicted RBP9.66□□□□□ -0.86
GINS3-205ENST00000564814 BCL11BQ9C0K0 894 aaPredicted RBP9.66□□□□□ -0.86
GINS3-205ENST00000564814 ATG3Q9NT62 314 aa9.66□□□□□ -0.86
GINS3-205ENST00000564814 IBTKQ9P2D0 1353 aaPredicted RBP9.65□□□□□ -0.86
GINS3-205ENST00000564814 TRIM37O94972 964 aa9.65□□□□□ -0.86
GINS3-205ENST00000564814 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
GINS3-205ENST00000564814 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
GINS3-205ENST00000564814 TTC5Q8N0Z6 440 aa9.65□□□□□ -0.86
GINS3-205ENST00000564814 TSPYL6Q8N831 410 aa9.65□□□□□ -0.86
GINS3-205ENST00000564814 C8orf58Q8NAV2 365 aa9.65□□□□□ -0.86
GINS3-205ENST00000564814 ZNF496Q96IT1 587 aaPredicted RBP9.65□□□□□ -0.86
GINS3-205ENST00000564814 PCDH10Q9P2E7 1040 aa9.65□□□□□ -0.86
GINS3-205ENST00000564814 RCAN3Q9UKA8 241 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms