RNA–Protein interactions for RNA: ENST00000564531.1

AC025259.3-201, humanhuman

TSL 3 BASIC

Gene AC025259.3, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025259.3-201ENST00000564531 VPS72Q15906 364 aa22.93■■□□□ 1.26
AC025259.3-201ENST00000564531 C8orf58Q8NAV2 365 aa22.93■■□□□ 1.26
AC025259.3-201ENST00000564531 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
AC025259.3-201ENST00000564531 TNS2Q63HR2 1409 aa22.92■■□□□ 1.26
AC025259.3-201ENST00000564531 KDM3BQ7LBC6 1761 aa22.92■■□□□ 1.26
AC025259.3-201ENST00000564531 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
AC025259.3-201ENST00000564531 SSH1Q8WYL5 1049 aa22.91■■□□□ 1.26
AC025259.3-201ENST00000564531 BCL9LQ86UU0 1499 aa22.91■■□□□ 1.26
AC025259.3-201ENST00000564531 EXOC5O00471 708 aa22.9■■□□□ 1.26
AC025259.3-201ENST00000564531 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
AC025259.3-201ENST00000564531 ZKSCAN2Q63HK3 967 aa22.9■■□□□ 1.26
AC025259.3-201ENST00000564531 TSPYL6Q8N831 410 aa22.9■■□□□ 1.26
AC025259.3-201ENST00000564531 CCDC9Q9Y3X0 531 aaKnown RBP22.9■■□□□ 1.26
AC025259.3-201ENST00000564531 SIPA1L3O60292 1781 aaPredicted RBP22.9■■□□□ 1.26
AC025259.3-201ENST00000564531 MIS18AQ9NYP9 233 aa22.89■■□□□ 1.25
AC025259.3-201ENST00000564531 SHANK3Q9BYB0 1731 aa22.88■■□□□ 1.25
AC025259.3-201ENST00000564531 VIRMAQ69YN4 1812 aaKnown RBP22.88■■□□□ 1.25
AC025259.3-201ENST00000564531 CABP4P57796 275 aa22.88■■□□□ 1.25
AC025259.3-201ENST00000564531 ARHGAP45Q92619 1136 aa22.88■■□□□ 1.25
AC025259.3-201ENST00000564531 USP21Q9UK80 565 aa22.88■■□□□ 1.25
AC025259.3-201ENST00000564531 PLIN1O60240 522 aa22.87■■□□□ 1.25
AC025259.3-201ENST00000564531 DDX54Q8TDD1 881 aaKnown RBP22.87■■□□□ 1.25
AC025259.3-201ENST00000564531 FRAT1Q92837 279 aaPredicted RBP22.87■■□□□ 1.25
AC025259.3-201ENST00000564531 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
AC025259.3-201ENST00000564531 ELL2O00472 640 aaPredicted RBP22.86■■□□□ 1.25
AC025259.3-201ENST00000564531 EIF4A1P60842 406 aaKnown RBP22.86■■□□□ 1.25
AC025259.3-201ENST00000564531 BCL2L13Q9BXK5 485 aa22.86■■□□□ 1.25
AC025259.3-201ENST00000564531 AAMPQ13685 434 aa22.85■■□□□ 1.25
AC025259.3-201ENST00000564531 DDB1Q16531 1140 aa22.85■■□□□ 1.25
AC025259.3-201ENST00000564531 CCDC30Q5VVM6 783 aa22.85■■□□□ 1.25
AC025259.3-201ENST00000564531 MRPL50Q8N5N7 158 aaKnown RBP22.85■■□□□ 1.25
AC025259.3-201ENST00000564531 STK31Q9BXU1 1019 aa22.85■■□□□ 1.25
AC025259.3-201ENST00000564531 ATF7IPQ6VMQ6 1270 aa22.83■■□□□ 1.25
AC025259.3-201ENST00000564531 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.25
AC025259.3-201ENST00000564531 NFATC2IPQ8NCF5 419 aa22.83■■□□□ 1.25
AC025259.3-201ENST00000564531 ZNF790Q6PG37 636 aa22.82■■□□□ 1.24
AC025259.3-201ENST00000564531 FTSJ3Q8IY81 847 aaKnown RBP22.82■■□□□ 1.24
AC025259.3-201ENST00000564531 API5Q9BZZ5 524 aaKnown RBP22.82■■□□□ 1.24
AC025259.3-201ENST00000564531 HEG1Q9ULI3 1381 aa22.81■■□□□ 1.24
AC025259.3-201ENST00000564531 KRT24Q2M2I5 525 aa22.81■■□□□ 1.24
AC025259.3-201ENST00000564531 DZIP1LQ8IYY4 767 aaKnown RBP22.81■■□□□ 1.24
AC025259.3-201ENST00000564531 NOB1Q9ULX3 412 aaKnown RBP22.81■■□□□ 1.24
AC025259.3-201ENST00000564531 PTPRCP08575 1304 aa22.81■■□□□ 1.24
AC025259.3-201ENST00000564531 AFF2P51816 1311 aa22.81■■□□□ 1.24
AC025259.3-201ENST00000564531 TRPC5Q9UL62 973 aaPredicted RBP22.8■■□□□ 1.24
AC025259.3-201ENST00000564531 HDGFL1Q5TGJ6 251 aa22.79■■□□□ 1.24
AC025259.3-201ENST00000564531 CRBNQ96SW2 442 aa22.79■■□□□ 1.24
AC025259.3-201ENST00000564531 TMOD3Q9NYL9 352 aa22.79■■□□□ 1.24
AC025259.3-201ENST00000564531 ATRNO75882 1429 aa22.78■■□□□ 1.24
AC025259.3-201ENST00000564531 EXOC6Q8TAG9 804 aa22.78■■□□□ 1.24
AC025259.3-201ENST00000564531 FMNL2Q96PY5 1086 aa22.78■■□□□ 1.24
AC025259.3-201ENST00000564531 CHMP4BQ9H444 224 aaKnown RBP22.78■■□□□ 1.24
AC025259.3-201ENST00000564531 TRIM27P14373 513 aa22.77■■□□□ 1.24
AC025259.3-201ENST00000564531 C20orf194Q5TEA3 1177 aa22.77■■□□□ 1.24
AC025259.3-201ENST00000564531 GIGYF1O75420 1035 aaPredicted RBP22.76■■□□□ 1.23
AC025259.3-201ENST00000564531 PAPPAQ13219 1627 aa22.75■■□□□ 1.23
AC025259.3-201ENST00000564531 KCNQ3O43525 872 aa22.75■■□□□ 1.23
AC025259.3-201ENST00000564531 SLC4A2P04920 1241 aa22.75■■□□□ 1.23
AC025259.3-201ENST00000564531 FAM98CQ17RN3 349 aaKnown RBP22.75■■□□□ 1.23
AC025259.3-201ENST00000564531 SNRPA1P09661 255 aaKnown RBP22.74■■□□□ 1.23
AC025259.3-201ENST00000564531 GJD4Q96KN9 370 aaPredicted RBP22.74■■□□□ 1.23
AC025259.3-201ENST00000564531 THSD7AQ9UPZ6 1657 aa22.74■■□□□ 1.23
AC025259.3-201ENST00000564531 TOGARAM1Q9Y4F4 1720 aa22.74■■□□□ 1.23
AC025259.3-201ENST00000564531 MVPQ14764 893 aaKnown RBP22.73■■□□□ 1.23
AC025259.3-201ENST00000564531 PANK1Q8TE04 598 aa22.73■■□□□ 1.23
AC025259.3-201ENST00000564531 FBXO41Q8TF61 875 aa22.73■■□□□ 1.23
AC025259.3-201ENST00000564531 DDX19BQ9UMR2 479 aa22.73■■□□□ 1.23
AC025259.3-201ENST00000564531 SLC39A6Q13433 755 aa22.72■■□□□ 1.23
AC025259.3-201ENST00000564531 DBF4Q9UBU7 674 aaPredicted RBP22.72■■□□□ 1.23
AC025259.3-201ENST00000564531 CACNA1FO60840 1977 aa22.71■■□□□ 1.23
AC025259.3-201ENST00000564531 CCDC136Q96JN2 1154 aa22.71■■□□□ 1.23
AC025259.3-201ENST00000564531 ABCC4O15439 1325 aa22.71■■□□□ 1.23
AC025259.3-201ENST00000564531 BCL9O00512 1426 aa22.71■■□□□ 1.23
AC025259.3-201ENST00000564531 TCERG1O14776 1098 aaKnown RBP22.7■■□□□ 1.22
AC025259.3-201ENST00000564531 CLUAP1Q96AJ1 413 aa22.7■■□□□ 1.22
AC025259.3-201ENST00000564531 ZNF496Q96IT1 587 aaPredicted RBP22.7■■□□□ 1.22
AC025259.3-201ENST00000564531 COG6Q9Y2V7 657 aa22.7■■□□□ 1.22
AC025259.3-201ENST00000564531 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
AC025259.3-201ENST00000564531 GLI3P10071 1580 aa22.7■■□□□ 1.22
AC025259.3-201ENST00000564531 UBR2Q8IWV8 1755 aa22.7■■□□□ 1.22
AC025259.3-201ENST00000564531 ZNF772Q68DY9 489 aaPredicted RBP22.69■■□□□ 1.22
AC025259.3-201ENST00000564531 MARCH10Q8NA82 808 aaPredicted RBP22.69■■□□□ 1.22
AC025259.3-201ENST00000564531 A0A0G2JS52 829 aa22.68■■□□□ 1.22
AC025259.3-201ENST00000564531 ONECUT3O60422 494 aaPredicted RBP22.68■■□□□ 1.22
AC025259.3-201ENST00000564531 RLBP1P12271 317 aa22.68■■□□□ 1.22
AC025259.3-201ENST00000564531 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
AC025259.3-201ENST00000564531 MYT1Q01538 1121 aa22.68■■□□□ 1.22
AC025259.3-201ENST00000564531 VSIG10Q8N0Z9 540 aa22.68■■□□□ 1.22
AC025259.3-201ENST00000564531 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
AC025259.3-201ENST00000564531 HYPKQ9NX55 129 aa22.68■■□□□ 1.22
AC025259.3-201ENST00000564531 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
AC025259.3-201ENST00000564531 FLIIQ13045 1269 aa22.67■■□□□ 1.22
AC025259.3-201ENST00000564531 ITPRIPQ8IWB1 547 aa22.67■■□□□ 1.22
AC025259.3-201ENST00000564531 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
AC025259.3-201ENST00000564531 PIGBQ92521 554 aa22.67■■□□□ 1.22
AC025259.3-201ENST00000564531 DOT1LQ8TEK3 1739 aa22.67■■□□□ 1.22
AC025259.3-201ENST00000564531 LAMB4A4D0S4 1761 aa22.66■■□□□ 1.22
AC025259.3-201ENST00000564531 QTRT2Q9H974 415 aaKnown RBP22.66■■□□□ 1.22
AC025259.3-201ENST00000564531 DDX21Q9NR30 783 aaKnown RBP eCLIP22.66■■□□□ 1.22
AC025259.3-201ENST00000564531 PXDNLA1KZ92 1463 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms