RNA–Protein interactions for RNA: ENST00000564278.1

NUP93-209, Transcript of nucleoporin 93, humanhuman

TSL 2

Gene NUP93, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-209ENST00000564278 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
NUP93-209ENST00000564278 COL5A3P25940 1745 aaPredicted RBP9.34□□□□□ -0.92
NUP93-209ENST00000564278 DPEP1P16444 411 aa9.33□□□□□ -0.92
NUP93-209ENST00000564278 SSFA2P28290 1259 aa9.33□□□□□ -0.92
NUP93-209ENST00000564278 AMPHP49418 695 aa9.33□□□□□ -0.92
NUP93-209ENST00000564278 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
NUP93-209ENST00000564278 HDGFL2Q7Z4V5 671 aaPredicted RBP9.33□□□□□ -0.92
NUP93-209ENST00000564278 PIGBQ92521 554 aa9.33□□□□□ -0.92
NUP93-209ENST00000564278 KDRP35968 1356 aa9.33□□□□□ -0.92
NUP93-209ENST00000564278 TIAM2Q8IVF5 1701 aa9.33□□□□□ -0.92
NUP93-209ENST00000564278 SBF1O95248 1867 aa9.32□□□□□ -0.92
NUP93-209ENST00000564278 RAPGEF4Q8WZA2 1011 aa9.32□□□□□ -0.92
NUP93-209ENST00000564278 SMG6Q86US8 1419 aaKnown RBP9.31□□□□□ -0.92
NUP93-209ENST00000564278 KIF20BQ96Q89 1820 aa9.31□□□□□ -0.92
NUP93-209ENST00000564278 LOC102724428A0A0B4J2F2 783 aa9.31□□□□□ -0.92
NUP93-209ENST00000564278 FCHSD2O94868 740 aa9.31□□□□□ -0.92
NUP93-209ENST00000564278 SLC34A2O95436 690 aa9.31□□□□□ -0.92
NUP93-209ENST00000564278 SIK1P57059 783 aa9.31□□□□□ -0.92
NUP93-209ENST00000564278 FSTL1Q12841 308 aa9.31□□□□□ -0.92
NUP93-209ENST00000564278 C16orf71Q8IYS4 520 aaPredicted RBP9.31□□□□□ -0.92
NUP93-209ENST00000564278 NCAPD2Q15021 1401 aa9.31□□□□□ -0.92
NUP93-209ENST00000564278 CGNL1Q0VF96 1302 aa9.31□□□□□ -0.92
NUP93-209ENST00000564278 MYH14Q7Z406 1995 aaKnown RBP9.3□□□□□ -0.92
NUP93-209ENST00000564278 TATP17735 454 aaPredicted RBP9.3□□□□□ -0.92
NUP93-209ENST00000564278 COG3Q96JB2 828 aa9.3□□□□□ -0.92
NUP93-209ENST00000564278 SIN3AQ96ST3 1273 aa9.3□□□□□ -0.92
NUP93-209ENST00000564278 RNF181Q9P0P0 153 aa9.3□□□□□ -0.92
NUP93-209ENST00000564278 ASAP1Q9ULH1 1129 aa9.3□□□□□ -0.92
NUP93-209ENST00000564278 ANKRD26Q9UPS8 1709 aa9.29□□□□□ -0.92
NUP93-209ENST00000564278 KCNA3P22001 575 aa9.29□□□□□ -0.92
NUP93-209ENST00000564278 RASSF7Q02833 373 aa9.29□□□□□ -0.92
NUP93-209ENST00000564278 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
NUP93-209ENST00000564278 SMARCC1Q92922 1105 aaPredicted RBP9.29□□□□□ -0.92
NUP93-209ENST00000564278 RRAGCQ9HB90 399 aa9.29□□□□□ -0.92
NUP93-209ENST00000564278 TERF2IPQ9NYB0 399 aa9.29□□□□□ -0.92
NUP93-209ENST00000564278 INSRP06213 1382 aa9.28□□□□□ -0.92
NUP93-209ENST00000564278 TGFB2P61812 414 aa9.28□□□□□ -0.92
NUP93-209ENST00000564278 DCAF5Q96JK2 942 aa9.28□□□□□ -0.92
NUP93-209ENST00000564278 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
NUP93-209ENST00000564278 GGNBP2Q9H3C7 697 aa9.28□□□□□ -0.92
NUP93-209ENST00000564278 FLT4P35916 1363 aa9.27□□□□□ -0.93
NUP93-209ENST00000564278 ADAMTS7Q9UKP4 1686 aa9.27□□□□□ -0.93
NUP93-209ENST00000564278 GYS1P13807 737 aa9.27□□□□□ -0.93
NUP93-209ENST00000564278 CHRNA5P30532 468 aa9.27□□□□□ -0.93
NUP93-209ENST00000564278 ATP6V1AP38606 617 aa9.27□□□□□ -0.93
NUP93-209ENST00000564278 SMC1BQ8NDV3 1235 aa9.27□□□□□ -0.93
NUP93-209ENST00000564278 KDM6AO15550 1401 aaPredicted RBP9.27□□□□□ -0.93
NUP93-209ENST00000564278 KDM2BQ8NHM5 1336 aa9.27□□□□□ -0.93
NUP93-209ENST00000564278 ZNF831Q5JPB2 1677 aa9.26□□□□□ -0.93
NUP93-209ENST00000564278 TJP1Q07157 1748 aa9.26□□□□□ -0.93
NUP93-209ENST00000564278 DDR1Q08345 913 aa9.26□□□□□ -0.93
NUP93-209ENST00000564278 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
NUP93-209ENST00000564278 DLEC1Q9Y238 1755 aa9.26□□□□□ -0.93
NUP93-209ENST00000564278 TMF1P82094 1093 aa9.25□□□□□ -0.93
NUP93-209ENST00000564278 CARD11Q9BXL7 1154 aa9.25□□□□□ -0.93
NUP93-209ENST00000564278 ATG3Q9NT62 314 aa9.25□□□□□ -0.93
NUP93-209ENST00000564278 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
NUP93-209ENST00000564278 SRP68Q9UHB9 627 aaKnown RBP9.25□□□□□ -0.93
NUP93-209ENST00000564278 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
NUP93-209ENST00000564278 NEUROD1Q13562 356 aa9.24□□□□□ -0.93
NUP93-209ENST00000564278 NKX1-1Q15270 411 aaPredicted RBP9.24□□□□□ -0.93
NUP93-209ENST00000564278 DALRD3Q5D0E6 543 aaKnown RBP9.24□□□□□ -0.93
NUP93-209ENST00000564278 ARHGEF1Q92888 912 aaKnown RBP9.24□□□□□ -0.93
NUP93-209ENST00000564278 TESK2Q96S53 571 aa9.24□□□□□ -0.93
NUP93-209ENST00000564278 AFDNP55196 1824 aaKnown RBP9.24□□□□□ -0.93
NUP93-209ENST00000564278 FYB1O15117 783 aa9.23□□□□□ -0.93
NUP93-209ENST00000564278 FOXN1O15353 648 aa9.23□□□□□ -0.93
NUP93-209ENST00000564278 PIM2Q9P1W9 311 aa9.23□□□□□ -0.93
NUP93-209ENST00000564278 MKRN1Q9UHC7 482 aaKnown RBP9.23□□□□□ -0.93
NUP93-209ENST00000564278 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
NUP93-209ENST00000564278 PARP3Q9Y6F1 533 aa9.23□□□□□ -0.93
NUP93-209ENST00000564278 CNTNAP4Q9C0A0 1308 aa9.23□□□□□ -0.93
NUP93-209ENST00000564278 CCDC88AQ3V6T2 1871 aa9.23□□□□□ -0.93
NUP93-209ENST00000564278 COL11A2P13942 1736 aaPredicted RBP9.22□□□□□ -0.93
NUP93-209ENST00000564278 PHKG2P15735 406 aa9.22□□□□□ -0.93
NUP93-209ENST00000564278 FKBP8Q14318 412 aa9.22□□□□□ -0.93
NUP93-209ENST00000564278 FAM161AQ3B820 660 aa9.22□□□□□ -0.93
NUP93-209ENST00000564278 TRAPPC3LQ5T215 181 aa9.22□□□□□ -0.93
NUP93-209ENST00000564278 NLGN1Q8N2Q7 840 aa9.22□□□□□ -0.93
NUP93-209ENST00000564278 CARMIL3Q8ND23 1372 aa9.22□□□□□ -0.93
NUP93-209ENST00000564278 NRXN2Q9P2S2 1712 aa9.22□□□□□ -0.93
NUP93-209ENST00000564278 POTECB2RU33 542 aa9.21□□□□□ -0.94
NUP93-209ENST00000564278 POTEIP0CG38 1075 aa9.21□□□□□ -0.94
NUP93-209ENST00000564278 POTEJP0CG39 1038 aa9.21□□□□□ -0.94
NUP93-209ENST00000564278 HOXD11P31277 338 aaPredicted RBP9.21□□□□□ -0.94
NUP93-209ENST00000564278 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
NUP93-209ENST00000564278 USP42Q9H9J4 1324 aaKnown RBP9.21□□□□□ -0.94
NUP93-209ENST00000564278 NFKBIEO00221 500 aa9.2□□□□□ -0.94
NUP93-209ENST00000564278 POLRMTO00411 1230 aaKnown RBP9.2□□□□□ -0.94
NUP93-209ENST00000564278 RFC4P35249 363 aa9.2□□□□□ -0.94
NUP93-209ENST00000564278 KIF24Q5T7B8 1368 aa9.2□□□□□ -0.94
NUP93-209ENST00000564278 TONSLQ96HA7 1378 aa9.2□□□□□ -0.94
NUP93-209ENST00000564278 PDE4DIPQ5VU43 2346 aa9.2□□□□□ -0.94
NUP93-209ENST00000564278 GLTPD2A6NH11 291 aa9.19□□□□□ -0.94
NUP93-209ENST00000564278 RPS6KA4O75676 772 aa9.19□□□□□ -0.94
NUP93-209ENST00000564278 HMGB2P26583 209 aaKnown RBP9.19□□□□□ -0.94
NUP93-209ENST00000564278 EYA1Q99502 592 aa9.19□□□□□ -0.94
NUP93-209ENST00000564278 SPG7Q9UQ90 795 aa9.19□□□□□ -0.94
NUP93-209ENST00000564278 ZC3H4Q9UPT8 1303 aaKnown RBP9.19□□□□□ -0.94
NUP93-209ENST00000564278 CNTNAP1P78357 1384 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms