RNA–Protein interactions for RNA: ENST00000564239.1

BBS4-207, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-207ENST00000564239 FIGNL2A6NMB9 653 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L15C9J2P7 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L10C9JJH3 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L11C9JVI0 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L21D6R901 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L18D6R9N7 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L22D6RA61 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L19D6RCP7 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L20D6RJB6 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 MAN1A2O60476 641 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 CENPCQ03188 943 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 USP17L24Q0WX57 530 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
BBS4-207ENST00000564239 ZNF358Q9NW07 568 aa9.15□□□□□ -0.94
BBS4-207ENST00000564239 SOBPA7XYQ1 873 aa9.14□□□□□ -0.95
BBS4-207ENST00000564239 ZNF787Q6DD87 383 aa9.14□□□□□ -0.95
BBS4-207ENST00000564239 SLC4A9Q96Q91 983 aa9.14□□□□□ -0.95
BBS4-207ENST00000564239 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
BBS4-207ENST00000564239 GRIP2Q9C0E4 1043 aa9.14□□□□□ -0.95
BBS4-207ENST00000564239 SERTAD1Q9UHV2 236 aa9.14□□□□□ -0.95
BBS4-207ENST00000564239 DPYDQ12882 1025 aa9.13□□□□□ -0.95
BBS4-207ENST00000564239 ANKMY2Q8IV38 441 aa9.13□□□□□ -0.95
BBS4-207ENST00000564239 BACH1O14867 736 aa9.12□□□□□ -0.95
BBS4-207ENST00000564239 ATG7O95352 703 aa9.12□□□□□ -0.95
BBS4-207ENST00000564239 SMTNP53814 917 aa9.12□□□□□ -0.95
BBS4-207ENST00000564239 TLR1Q15399 786 aa9.12□□□□□ -0.95
BBS4-207ENST00000564239 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
BBS4-207ENST00000564239 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
BBS4-207ENST00000564239 ARXQ96QS3 562 aa9.12□□□□□ -0.95
BBS4-207ENST00000564239 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
BBS4-207ENST00000564239 SFI1A8K8P3 1242 aa9.11□□□□□ -0.95
BBS4-207ENST00000564239 PPP1R15AO75807 674 aaPredicted RBP9.11□□□□□ -0.95
BBS4-207ENST00000564239 SEC13P55735 322 aa9.11□□□□□ -0.95
BBS4-207ENST00000564239 LYSMD3Q7Z3D4 306 aa9.11□□□□□ -0.95
BBS4-207ENST00000564239 PRICKLE2Q7Z3G6 844 aa9.11□□□□□ -0.95
BBS4-207ENST00000564239 ZSCAN10Q96SZ4 725 aaPredicted RBP9.11□□□□□ -0.95
BBS4-207ENST00000564239 A6NJY4 79 aa9.1□□□□□ -0.95
BBS4-207ENST00000564239 M0R2N6 131 aa9.1□□□□□ -0.95
BBS4-207ENST00000564239 ELOAQ14241 798 aaKnown RBP9.1□□□□□ -0.95
BBS4-207ENST00000564239 MTFR1Q15390 333 aa9.1□□□□□ -0.95
BBS4-207ENST00000564239 NOVA2Q9UNW9 492 aaKnown RBP9.1□□□□□ -0.95
BBS4-207ENST00000564239 EPHA4P54764 986 aa9.09□□□□□ -0.95
BBS4-207ENST00000564239 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
BBS4-207ENST00000564239 TNS4Q8IZW8 715 aa9.09□□□□□ -0.95
BBS4-207ENST00000564239 TSEN2Q8NCE0 465 aaKnown RBP9.09□□□□□ -0.95
BBS4-207ENST00000564239 ZMIZ1Q9ULJ6 1067 aa9.09□□□□□ -0.95
BBS4-207ENST00000564239 SPATA31C2B4DYI2 1134 aa9.08□□□□□ -0.96
BBS4-207ENST00000564239 POU4F2Q12837 409 aa9.08□□□□□ -0.96
BBS4-207ENST00000564239 FAM200AQ8TCP9 573 aa9.08□□□□□ -0.96
BBS4-207ENST00000564239 SCHIP1Q9P0W5 487 aaPredicted RBP9.08□□□□□ -0.96
BBS4-207ENST00000564239 IQSEC3Q9UPP2 1182 aaPredicted RBP9.08□□□□□ -0.96
BBS4-207ENST00000564239 CDK2AP1O14519 115 aa9.07□□□□□ -0.96
BBS4-207ENST00000564239 RHOQP17081 205 aa9.07□□□□□ -0.96
BBS4-207ENST00000564239 TMEM214Q6NUQ4 689 aaKnown RBP9.07□□□□□ -0.96
BBS4-207ENST00000564239 USP3Q9Y6I4 520 aa9.07□□□□□ -0.96
BBS4-207ENST00000564239 GTF2E1P29083 439 aaPredicted RBP9.06□□□□□ -0.96
BBS4-207ENST00000564239 FOXK2Q01167 660 aa9.06□□□□□ -0.96
BBS4-207ENST00000564239 PTSQ03393 145 aa9.06□□□□□ -0.96
BBS4-207ENST00000564239 WDR44Q5JSH3 913 aa9.06□□□□□ -0.96
BBS4-207ENST00000564239 NBPF10Q6P3W6 841 aaKnown RBP9.06□□□□□ -0.96
BBS4-207ENST00000564239 ZNF295-AS1Q8N0V1 137 aa9.06□□□□□ -0.96
BBS4-207ENST00000564239 NBPF15Q8N660 670 aa9.06□□□□□ -0.96
BBS4-207ENST00000564239 RHBDD1Q8TEB9 315 aa9.06□□□□□ -0.96
BBS4-207ENST00000564239 STK32AQ8WU08 396 aa9.06□□□□□ -0.96
BBS4-207ENST00000564239 SENP3-EIF4A1A0A087X0R7 540 aa9.05□□□□□ -0.96
BBS4-207ENST00000564239 GNASQ5JWF2 1037 aa9.05□□□□□ -0.96
BBS4-207ENST00000564239 TAS1R3Q7RTX0 852 aa9.05□□□□□ -0.96
BBS4-207ENST00000564239 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
BBS4-207ENST00000564239 C4orf17Q53FE4 359 aa9.04□□□□□ -0.96
BBS4-207ENST00000564239 TMEM164Q5U3C3 297 aa9.04□□□□□ -0.96
BBS4-207ENST00000564239 SLC9A9Q8IVB4 645 aa9.04□□□□□ -0.96
BBS4-207ENST00000564239 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
BBS4-207ENST00000564239 SLC35F4A4IF30 521 aa9.03□□□□□ -0.96
BBS4-207ENST00000564239 PHKA2P46019 1235 aa9.03□□□□□ -0.96
BBS4-207ENST00000564239 FAM69CQ0P6D2 419 aa9.03□□□□□ -0.96
BBS4-207ENST00000564239 TBCELQ5QJ74 424 aa9.03□□□□□ -0.96
BBS4-207ENST00000564239 NIFKQ9BYG3 293 aaKnown RBP9.03□□□□□ -0.96
BBS4-207ENST00000564239 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
BBS4-207ENST00000564239 LGR5O75473 907 aa9.02□□□□□ -0.97
BBS4-207ENST00000564239 C21orf2O43822 256 aa9.01□□□□□ -0.97
BBS4-207ENST00000564239 SWI5Q1ZZU3 235 aa9.01□□□□□ -0.97
BBS4-207ENST00000564239 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
BBS4-207ENST00000564239 TIMMDC1Q9NPL8 285 aa9.01□□□□□ -0.97
BBS4-207ENST00000564239 PLA2G4AP47712 749 aa9□□□□□ -0.97
BBS4-207ENST00000564239 ZDHHC1Q8WTX9 485 aa9□□□□□ -0.97
BBS4-207ENST00000564239 CABP1Q9NZU7 370 aa9□□□□□ -0.97
BBS4-207ENST00000564239 NXF1Q9UBU9 619 aaKnown RBP9□□□□□ -0.97
BBS4-207ENST00000564239 DYRK1BQ9Y463 629 aa9□□□□□ -0.97
BBS4-207ENST00000564239 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
BBS4-207ENST00000564239 TEAD4Q15561 434 aa8.99□□□□□ -0.97
BBS4-207ENST00000564239 SCG3Q8WXD2 468 aaKnown RBP8.99□□□□□ -0.97
BBS4-207ENST00000564239 PARP3Q9Y6F1 533 aa8.99□□□□□ -0.97
BBS4-207ENST00000564239 PPFIA3O75145 1194 aa8.98□□□□□ -0.97
BBS4-207ENST00000564239 CSB-PGBD3P0DP91 1061 aa8.98□□□□□ -0.97
BBS4-207ENST00000564239 WEE1P30291 646 aa8.98□□□□□ -0.97
BBS4-207ENST00000564239 NOS2P35228 1153 aa8.98□□□□□ -0.97
BBS4-207ENST00000564239 PSMA6P60900 246 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms