RNA–Protein interactions for RNA: ENST00000564040.6

NAE1-213, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-213ENST00000564040 ATP6V1AP38606 617 aa28.29■■■□□ 2.12
NAE1-213ENST00000564040 MSL1Q68DK7 614 aa28.29■■■□□ 2.12
NAE1-213ENST00000564040 NPC1L1Q9UHC9 1359 aa28.28■■■□□ 2.12
NAE1-213ENST00000564040 HMOX1P09601 288 aa28.28■■■□□ 2.12
NAE1-213ENST00000564040 HMGB2P26583 209 aaKnown RBP28.28■■■□□ 2.12
NAE1-213ENST00000564040 KLHL34Q8N239 644 aa28.28■■■□□ 2.12
NAE1-213ENST00000564040 MAP3K5Q99683 1374 aa28.27■■■□□ 2.12
NAE1-213ENST00000564040 C1orf141Q5JVX7 400 aa28.27■■■□□ 2.12
NAE1-213ENST00000564040 UBR3Q6ZT12 1888 aa28.27■■■□□ 2.12
NAE1-213ENST00000564040 PHF14O94880 888 aa28.26■■■□□ 2.11
NAE1-213ENST00000564040 CABP4P57796 275 aa28.26■■■□□ 2.11
NAE1-213ENST00000564040 FLAD1Q8NFF5 587 aa28.26■■■□□ 2.11
NAE1-213ENST00000564040 DIAPH1O60610 1272 aaKnown RBP28.25■■■□□ 2.11
NAE1-213ENST00000564040 SLC4A9Q96Q91 983 aa28.25■■■□□ 2.11
NAE1-213ENST00000564040 YY1P25490 414 aa28.24■■■□□ 2.11
NAE1-213ENST00000564040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.23■■■□□ 2.11
NAE1-213ENST00000564040 NFATC2IPQ8NCF5 419 aa28.23■■■□□ 2.11
NAE1-213ENST00000564040 RBM42Q9BTD8 480 aaKnown RBP28.23■■■□□ 2.11
NAE1-213ENST00000564040 NLGN2Q8NFZ4 835 aa28.2■■■□□ 2.1
NAE1-213ENST00000564040 COL3A1P02461 1466 aaPredicted RBP28.2■■■□□ 2.1
NAE1-213ENST00000564040 SCN11AQ9UI33 1791 aa28.19■■■□□ 2.1
NAE1-213ENST00000564040 GNPATO15228 680 aa28.19■■■□□ 2.1
NAE1-213ENST00000564040 AKAP4Q5JQC9 854 aa28.19■■■□□ 2.1
NAE1-213ENST00000564040 LGR6Q9HBX8 967 aa28.19■■■□□ 2.1
NAE1-213ENST00000564040 SSFA2P28290 1259 aa28.18■■■□□ 2.1
NAE1-213ENST00000564040 MTHFSDQ2M296 383 aaKnown RBP28.17■■■□□ 2.1
NAE1-213ENST00000564040 ZNF831Q5JPB2 1677 aa28.16■■■□□ 2.1
NAE1-213ENST00000564040 PTCD1O75127 700 aaKnown RBP28.16■■■□□ 2.1
NAE1-213ENST00000564040 U2SURPO15042 1029 aaKnown RBP28.15■■■□□ 2.1
NAE1-213ENST00000564040 COL5A3P25940 1745 aaPredicted RBP28.14■■■□□ 2.1
NAE1-213ENST00000564040 GPR162Q16538 588 aa28.13■■■□□ 2.09
NAE1-213ENST00000564040 VIRMAQ69YN4 1812 aaKnown RBP28.13■■■□□ 2.09
NAE1-213ENST00000564040 RNMTO43148 476 aaKnown RBP28.12■■■□□ 2.09
NAE1-213ENST00000564040 PELP1Q8IZL8 1130 aaKnown RBP28.11■■■□□ 2.09
NAE1-213ENST00000564040 SLC52A2Q9HAB3 445 aa28.11■■■□□ 2.09
NAE1-213ENST00000564040 RC3H1Q5TC82 1133 aaKnown RBP28.1■■■□□ 2.09
NAE1-213ENST00000564040 RTCBQ9Y3I0 505 aaKnown RBP28.1■■■□□ 2.09
NAE1-213ENST00000564040 MYH14Q7Z406 1995 aaKnown RBP28.09■■■□□ 2.09
NAE1-213ENST00000564040 TRAPPC3LQ5T215 181 aa28.08■■■□□ 2.09
NAE1-213ENST00000564040 CNTNAP4Q9C0A0 1308 aa28.08■■■□□ 2.09
NAE1-213ENST00000564040 PPP2R1AP30153 589 aa28.07■■■□□ 2.08
NAE1-213ENST00000564040 ARHGEF1Q92888 912 aaKnown RBP28.07■■■□□ 2.08
NAE1-213ENST00000564040 RPS6KA4O75676 772 aa28.06■■■□□ 2.08
NAE1-213ENST00000564040 SLC39A6Q13433 755 aa28.06■■■□□ 2.08
NAE1-213ENST00000564040 ADAMTS7Q9UKP4 1686 aa28.06■■■□□ 2.08
NAE1-213ENST00000564040 TJP1Q07157 1748 aa28.06■■■□□ 2.08
NAE1-213ENST00000564040 MRC1P22897 1456 aa28.05■■■□□ 2.08
NAE1-213ENST00000564040 CFAP53Q96M91 514 aa28.05■■■□□ 2.08
NAE1-213ENST00000564040 CD2APQ9Y5K6 639 aa28.05■■■□□ 2.08
NAE1-213ENST00000564040 CHD4Q14839 1912 aa28.04■■■□□ 2.08
NAE1-213ENST00000564040 CRKLP46109 303 aaKnown RBP28.04■■■□□ 2.08
NAE1-213ENST00000564040 YBX3P16989 372 aaKnown RBP eCLIP28.03■■■□□ 2.085e-10■□□□□ 11.1
NAE1-213ENST00000564040 PHACTR3Q96KR7 559 aa28.01■■■□□ 2.07
NAE1-213ENST00000564040 CICQ96RK0 1608 aaPredicted RBP28■■■□□ 2.07
NAE1-213ENST00000564040 MMP10P09238 476 aa28■■■□□ 2.07
NAE1-213ENST00000564040 ADRA2BP18089 450 aa28■■■□□ 2.07
NAE1-213ENST00000564040 RFC4P35249 363 aa28■■■□□ 2.07
NAE1-213ENST00000564040 INTS5Q6P9B9 1019 aaKnown RBP28■■■□□ 2.07
NAE1-213ENST00000564040 DNAJC10Q8IXB1 793 aa28■■■□□ 2.07
NAE1-213ENST00000564040 IL17REQ8NFR9 667 aa28■■■□□ 2.07
NAE1-213ENST00000564040 RSPH6AQ9H0K4 717 aa28■■■□□ 2.07
NAE1-213ENST00000564040 C4AP0C0L4 1744 aa27.99■■■□□ 2.07
NAE1-213ENST00000564040 PRKAR2BP31323 418 aa27.99■■■□□ 2.07
NAE1-213ENST00000564040 GAS2L2Q8NHY3 880 aa27.99■■■□□ 2.07
NAE1-213ENST00000564040 KCPQ6ZWJ8 1503 aa27.98■■■□□ 2.07
NAE1-213ENST00000564040 GNAT3A8MTJ3 354 aa27.98■■■□□ 2.07
NAE1-213ENST00000564040 GYS1P13807 737 aa27.98■■■□□ 2.07
NAE1-213ENST00000564040 NLGN1Q8N2Q7 840 aa27.97■■■□□ 2.07
NAE1-213ENST00000564040 NUDCQ9Y266 331 aa27.97■■■□□ 2.07
NAE1-213ENST00000564040 ZNF784Q8NCA9 323 aaPredicted RBP27.96■■■□□ 2.07
NAE1-213ENST00000564040 U2AF1L5P0DN76 240 aaPredicted RBP27.95■■■□□ 2.06
NAE1-213ENST00000564040 U2AF1Q01081 240 aaKnown RBP eCLIP27.95■■■□□ 2.061e-6■■■■□ 22.5
NAE1-213ENST00000564040 SRP68Q9UHB9 627 aaKnown RBP27.95■■■□□ 2.06
NAE1-213ENST00000564040 WWC3Q9ULE0 1092 aa27.95■■■□□ 2.06
NAE1-213ENST00000564040 CYP19A1P11511 503 aaPredicted RBP27.94■■■□□ 2.06
NAE1-213ENST00000564040 CCDC87Q9NVE4 849 aa27.93■■■□□ 2.06
NAE1-213ENST00000564040 UBR2Q8IWV8 1755 aa27.93■■■□□ 2.06
NAE1-213ENST00000564040 TEFQ10587 303 aa27.92■■■□□ 2.06
NAE1-213ENST00000564040 SIPA1L3O60292 1781 aaPredicted RBP27.91■■■□□ 2.06
NAE1-213ENST00000564040 GRIN3BO60391 1043 aa27.91■■■□□ 2.06
NAE1-213ENST00000564040 USP42Q9H9J4 1324 aaKnown RBP27.9■■■□□ 2.06
NAE1-213ENST00000564040 FCHSD2O94868 740 aa27.89■■■□□ 2.06
NAE1-213ENST00000564040 FKBP8Q14318 412 aa27.89■■■□□ 2.06
NAE1-213ENST00000564040 TTC5Q8N0Z6 440 aa27.89■■■□□ 2.06
NAE1-213ENST00000564040 VSIG10Q8N0Z9 540 aa27.89■■■□□ 2.06
NAE1-213ENST00000564040 KIF13BQ9NQT8 1826 aa27.88■■■□□ 2.05
NAE1-213ENST00000564040 ZNF790Q6PG37 636 aa27.88■■■□□ 2.05
NAE1-213ENST00000564040 ZBTB1Q9Y2K1 713 aa27.88■■■□□ 2.05
NAE1-213ENST00000564040 SOS1Q07889 1333 aaPredicted RBP27.88■■■□□ 2.05
NAE1-213ENST00000564040 CEMIPQ8WUJ3 1361 aa27.87■■■□□ 2.05
NAE1-213ENST00000564040 ZNF496Q96IT1 587 aaPredicted RBP27.87■■■□□ 2.05
NAE1-213ENST00000564040 PARP3Q9Y6F1 533 aa27.86■■■□□ 2.05
NAE1-213ENST00000564040 KIAA1551Q9HCM1 1747 aa27.85■■■□□ 2.05
NAE1-213ENST00000564040 USPL1Q5W0Q7 1092 aa27.85■■■□□ 2.05
NAE1-213ENST00000564040 N4BP2Q86UW6 1770 aaPredicted RBP27.85■■■□□ 2.05
NAE1-213ENST00000564040 KCNQ3O43525 872 aa27.84■■■□□ 2.05
NAE1-213ENST00000564040 C10orf71Q711Q0 1435 aa27.84■■■□□ 2.05
NAE1-213ENST00000564040 PXDNLA1KZ92 1463 aa27.83■■■□□ 2.05
NAE1-213ENST00000564040 A0A0G2JLW4 131 aa27.83■■■□□ 2.05
NAE1-213ENST00000564040 CANXP27824 592 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms