RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 U2AF1L5P0DN76 240 aaPredicted RBP25.72■■□□□ 1.71
CBFB-204ENST00000563939 U2AF1Q01081 240 aaKnown RBP eCLIP25.72■■□□□ 1.71
CBFB-204ENST00000563939 COL23A1Q86Y22 540 aaPredicted RBP25.72■■□□□ 1.71
CBFB-204ENST00000563939 RNMTO43148 476 aaKnown RBP25.7■■□□□ 1.7
CBFB-204ENST00000563939 LINC00116Q8NCU8 138 aa25.7■■□□□ 1.7
CBFB-204ENST00000563939 ITPK1Q13572 414 aa25.69■■□□□ 1.7
CBFB-204ENST00000563939 FLAD1Q8NFF5 587 aa25.69■■□□□ 1.7
CBFB-204ENST00000563939 PTCD1O75127 700 aaKnown RBP25.68■■□□□ 1.7
CBFB-204ENST00000563939 PRKAR2BP31323 418 aa25.68■■□□□ 1.7
CBFB-204ENST00000563939 POLD1P28340 1107 aa25.67■■□□□ 1.7
CBFB-204ENST00000563939 GAS2L2Q8NHY3 880 aa25.67■■□□□ 1.7
CBFB-204ENST00000563939 ARXQ96QS3 562 aa25.67■■□□□ 1.7
CBFB-204ENST00000563939 SGIP1Q9BQI5 828 aa25.67■■□□□ 1.7
CBFB-204ENST00000563939 SLC52A2Q9HAB3 445 aa25.67■■□□□ 1.7
CBFB-204ENST00000563939 PHF14O94880 888 aa25.66■■□□□ 1.7
CBFB-204ENST00000563939 SMIM5Q71RC9 77 aa25.66■■□□□ 1.7
CBFB-204ENST00000563939 RSPH6AQ9H0K4 717 aa25.66■■□□□ 1.7
CBFB-204ENST00000563939 PHACTR3Q96KR7 559 aa25.65■■□□□ 1.7
CBFB-204ENST00000563939 SLC4A9Q96Q91 983 aa25.65■■□□□ 1.7
CBFB-204ENST00000563939 GNAT3A8MTJ3 354 aa25.64■■□□□ 1.7
CBFB-204ENST00000563939 FCHSD2O94868 740 aa25.64■■□□□ 1.7
CBFB-204ENST00000563939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.63■■□□□ 1.69
CBFB-204ENST00000563939 GNPATO15228 680 aa25.63■■□□□ 1.69
CBFB-204ENST00000563939 RALBP1Q15311 655 aa25.63■■□□□ 1.69
CBFB-204ENST00000563939 FHDC1Q9C0D6 1143 aaPredicted RBP25.63■■□□□ 1.69
CBFB-204ENST00000563939 C5P01031 1676 aa25.62■■□□□ 1.69
CBFB-204ENST00000563939 MSL1Q68DK7 614 aa25.62■■□□□ 1.69
CBFB-204ENST00000563939 AMIGO3Q86WK7 504 aa25.62■■□□□ 1.69
CBFB-204ENST00000563939 DCAF8L1A6NGE4 600 aa25.61■■□□□ 1.69
CBFB-204ENST00000563939 KLHL34Q8N239 644 aa25.61■■□□□ 1.69
CBFB-204ENST00000563939 SLC39A6Q13433 755 aa25.6■■□□□ 1.69
CBFB-204ENST00000563939 C4BP0C0L5 1744 aa25.6■■□□□ 1.69
CBFB-204ENST00000563939 MAP3K5Q99683 1374 aa25.59■■□□□ 1.69
CBFB-204ENST00000563939 SSFA2P28290 1259 aa25.59■■□□□ 1.69
CBFB-204ENST00000563939 TEFQ10587 303 aa25.59■■□□□ 1.69
CBFB-204ENST00000563939 IL17REQ8NFR9 667 aa25.59■■□□□ 1.69
CBFB-204ENST00000563939 SYT17Q9BSW7 474 aa25.59■■□□□ 1.69
CBFB-204ENST00000563939 RTCBQ9Y3I0 505 aaKnown RBP25.58■■□□□ 1.69
CBFB-204ENST00000563939 QSER1Q2KHR3 1735 aa25.57■■□□□ 1.68
CBFB-204ENST00000563939 NEFMP07197 916 aa25.57■■□□□ 1.68
CBFB-204ENST00000563939 RC3H1Q5TC82 1133 aaKnown RBP25.57■■□□□ 1.68
CBFB-204ENST00000563939 TAF1LQ8IZX4 1826 aa25.57■■□□□ 1.68
CBFB-204ENST00000563939 TRAPPC3LQ5T215 181 aa25.56■■□□□ 1.68
CBFB-204ENST00000563939 TUBGCP6Q96RT7 1819 aa25.56■■□□□ 1.68
CBFB-204ENST00000563939 SCN11AQ9UI33 1791 aa25.55■■□□□ 1.68
CBFB-204ENST00000563939 RTF1Q92541 710 aaKnown RBP25.54■■□□□ 1.68
CBFB-204ENST00000563939 RPS6KA4O75676 772 aa25.53■■□□□ 1.68
CBFB-204ENST00000563939 TTC5Q8N0Z6 440 aa25.53■■□□□ 1.68
CBFB-204ENST00000563939 CNTNAP4Q9C0A0 1308 aa25.53■■□□□ 1.68
CBFB-204ENST00000563939 CRKLP46109 303 aaKnown RBP25.52■■□□□ 1.68
CBFB-204ENST00000563939 DNAJC10Q8IXB1 793 aa25.52■■□□□ 1.68
CBFB-204ENST00000563939 PNNQ9H307 717 aaKnown RBP25.51■■□□□ 1.67
CBFB-204ENST00000563939 RFC4P35249 363 aa25.5■■□□□ 1.67
CBFB-204ENST00000563939 ARHGEF1Q92888 912 aaKnown RBP25.5■■□□□ 1.67
CBFB-204ENST00000563939 MYBBP1AQ9BQG0 1328 aaKnown RBP25.5■■□□□ 1.67
CBFB-204ENST00000563939 MCM10Q7L590 875 aa25.49■■□□□ 1.67
CBFB-204ENST00000563939 MRC1P22897 1456 aa25.48■■□□□ 1.67
CBFB-204ENST00000563939 ADRA2BP18089 450 aa25.48■■□□□ 1.67
CBFB-204ENST00000563939 BTBD11A6QL63 1104 aa25.47■■□□□ 1.67
CBFB-204ENST00000563939 DCTN1Q14203 1278 aa25.47■■□□□ 1.67
CBFB-204ENST00000563939 INTS5Q6P9B9 1019 aaKnown RBP25.47■■□□□ 1.67
CBFB-204ENST00000563939 ZNF790Q6PG37 636 aa25.47■■□□□ 1.67
CBFB-204ENST00000563939 HTATSF1O43719 755 aaKnown RBP25.46■■□□□ 1.67
CBFB-204ENST00000563939 CYP19A1P11511 503 aaPredicted RBP25.46■■□□□ 1.67
CBFB-204ENST00000563939 VSIG10Q8N0Z9 540 aa25.46■■□□□ 1.67
CBFB-204ENST00000563939 CCDC87Q9NVE4 849 aa25.46■■□□□ 1.67
CBFB-204ENST00000563939 UBR3Q6ZT12 1888 aa25.46■■□□□ 1.67
CBFB-204ENST00000563939 ZNF496Q96IT1 587 aaPredicted RBP25.45■■□□□ 1.66
CBFB-204ENST00000563939 PLEKHF1Q96S99 279 aa25.45■■□□□ 1.66
CBFB-204ENST00000563939 ZNF831Q5JPB2 1677 aa25.45■■□□□ 1.66
CBFB-204ENST00000563939 CEMIPQ8WUJ3 1361 aa25.44■■□□□ 1.66
CBFB-204ENST00000563939 MAPK8IP3Q9UPT6 1336 aa25.44■■□□□ 1.66
CBFB-204ENST00000563939 NLGN1Q8N2Q7 840 aa25.44■■□□□ 1.66
CBFB-204ENST00000563939 ADAMTS7Q9UKP4 1686 aa25.43■■□□□ 1.66
CBFB-204ENST00000563939 STARD3NLO95772 234 aa25.43■■□□□ 1.66
CBFB-204ENST00000563939 KCNQ3O43525 872 aa25.42■■□□□ 1.66
CBFB-204ENST00000563939 PELP1Q8IZL8 1130 aaKnown RBP25.42■■□□□ 1.66
CBFB-204ENST00000563939 NLGN2Q8NFZ4 835 aa25.42■■□□□ 1.66
CBFB-204ENST00000563939 FMNL2Q96PY5 1086 aa25.42■■□□□ 1.66
CBFB-204ENST00000563939 PRKRIP1Q9H875 184 aaPredicted RBP25.42■■□□□ 1.66
CBFB-204ENST00000563939 ZNF316A6NFI3 1004 aaPredicted RBP25.41■■□□□ 1.66
CBFB-204ENST00000563939 MMP10P09238 476 aa25.41■■□□□ 1.66
CBFB-204ENST00000563939 NFE2L2Q16236 605 aa25.41■■□□□ 1.66
CBFB-204ENST00000563939 GPR162Q16538 588 aa25.41■■□□□ 1.66
CBFB-204ENST00000563939 TEX13AQ9BXU3 409 aaPredicted RBP25.41■■□□□ 1.66
CBFB-204ENST00000563939 CD2APQ9Y5K6 639 aa25.4■■□□□ 1.66
CBFB-204ENST00000563939 KCPQ6ZWJ8 1503 aa25.4■■□□□ 1.66
CBFB-204ENST00000563939 GYS1P13807 737 aa25.39■■□□□ 1.66
CBFB-204ENST00000563939 CANXP27824 592 aaKnown RBP25.39■■□□□ 1.66
CBFB-204ENST00000563939 WDR43Q15061 677 aaKnown RBP eCLIP25.39■■□□□ 1.66
CBFB-204ENST00000563939 TAF7Q15545 349 aaPredicted RBP25.39■■□□□ 1.66
CBFB-204ENST00000563939 SRP68Q9UHB9 627 aaKnown RBP25.39■■□□□ 1.66
CBFB-204ENST00000563939 COL24A1Q17RW2 1714 aa25.39■■□□□ 1.65
CBFB-204ENST00000563939 COL5A3P25940 1745 aaPredicted RBP25.38■■□□□ 1.65
CBFB-204ENST00000563939 VIRMAQ69YN4 1812 aaKnown RBP25.38■■□□□ 1.65
CBFB-204ENST00000563939 ZPR1O75312 459 aa25.38■■□□□ 1.65
CBFB-204ENST00000563939 HEG1Q9ULI3 1381 aa25.38■■□□□ 1.65
CBFB-204ENST00000563939 ZBTB1Q9Y2K1 713 aa25.37■■□□□ 1.65
CBFB-204ENST00000563939 MIS18AQ9NYP9 233 aa25.36■■□□□ 1.65
CBFB-204ENST00000563939 TJP1Q07157 1748 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms