RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 USHBP1Q8N6Y0 703 aa25.11■■□□□ 1.61
SYNGR3-203ENST00000563869 PKD1L3Q7Z443 1732 aa25.1■■□□□ 1.61
SYNGR3-203ENST00000563869 U2AF1L5P0DN76 240 aaPredicted RBP25.1■■□□□ 1.61
SYNGR3-203ENST00000563869 U2AF1Q01081 240 aaKnown RBP eCLIP25.1■■□□□ 1.61
SYNGR3-203ENST00000563869 MSL1Q68DK7 614 aa25.1■■□□□ 1.61
SYNGR3-203ENST00000563869 FLAD1Q8NFF5 587 aa25.1■■□□□ 1.61
SYNGR3-203ENST00000563869 SPG7Q9UQ90 795 aa25.1■■□□□ 1.61
SYNGR3-203ENST00000563869 CD2APQ9Y5K6 639 aa25.1■■□□□ 1.61
SYNGR3-203ENST00000563869 SULT6B1Q6IMI4 303 aa25.09■■□□□ 1.61
SYNGR3-203ENST00000563869 MRS2Q9HD23 443 aa25.08■■□□□ 1.61
SYNGR3-203ENST00000563869 PCDH11XQ9BZA7 1347 aa25.08■■□□□ 1.6
SYNGR3-203ENST00000563869 PCDH11YQ9BZA8 1340 aa25.08■■□□□ 1.6
SYNGR3-203ENST00000563869 PALLDQ8WX93 1383 aa25.07■■□□□ 1.6
SYNGR3-203ENST00000563869 ITGB4P16144 1822 aa25.07■■□□□ 1.6
SYNGR3-203ENST00000563869 ATP10DQ9P241 1426 aa25.06■■□□□ 1.6
SYNGR3-203ENST00000563869 PLEKHO1Q53GL0 409 aaPredicted RBP25.06■■□□□ 1.6
SYNGR3-203ENST00000563869 C4BP0C0L5 1744 aa25.06■■□□□ 1.6
SYNGR3-203ENST00000563869 TOGARAM1Q9Y4F4 1720 aa25.05■■□□□ 1.6
SYNGR3-203ENST00000563869 MPRIPQ6WCQ1 1025 aa25.03■■□□□ 1.6
SYNGR3-203ENST00000563869 UBR3Q6ZT12 1888 aa25.02■■□□□ 1.6
SYNGR3-203ENST00000563869 HSP90AB1P08238 724 aaKnown RBP25.02■■□□□ 1.6
SYNGR3-203ENST00000563869 CYP27B1O15528 508 aa25.01■■□□□ 1.59
SYNGR3-203ENST00000563869 IFFO2Q5TF58 517 aa25.01■■□□□ 1.59
SYNGR3-203ENST00000563869 SMARCC1Q92922 1105 aaPredicted RBP25.01■■□□□ 1.59
SYNGR3-203ENST00000563869 HMOX1P09601 288 aa25■■□□□ 1.59
SYNGR3-203ENST00000563869 GAS2L2Q8NHY3 880 aa25■■□□□ 1.59
SYNGR3-203ENST00000563869 MAPK8IP3Q9UPT6 1336 aa25■■□□□ 1.59
SYNGR3-203ENST00000563869 ADCY9O60503 1353 aa24.99■■□□□ 1.59
SYNGR3-203ENST00000563869 AK7Q96M32 723 aa24.99■■□□□ 1.59
SYNGR3-203ENST00000563869 RSPH6AQ9H0K4 717 aa24.99■■□□□ 1.59
SYNGR3-203ENST00000563869 GPBP1L1Q9HC44 474 aaPredicted RBP24.99■■□□□ 1.59
SYNGR3-203ENST00000563869 C1orf141Q5JVX7 400 aa24.98■■□□□ 1.59
SYNGR3-203ENST00000563869 AEBP1Q8IUX7 1158 aa24.97■■□□□ 1.59
SYNGR3-203ENST00000563869 IFNL2Q8IZJ0 200 aa24.97■■□□□ 1.59
SYNGR3-203ENST00000563869 PRKAR2BP31323 418 aa24.96■■□□□ 1.59
SYNGR3-203ENST00000563869 AMIGO3Q86WK7 504 aa24.96■■□□□ 1.59
SYNGR3-203ENST00000563869 PNISRQ8TF01 805 aaKnown RBP24.96■■□□□ 1.59
SYNGR3-203ENST00000563869 CEP350Q5VT06 3117 aa24.96■■□□□ 1.59
SYNGR3-203ENST00000563869 NKX1-1Q15270 411 aaPredicted RBP24.94■■□□□ 1.58
SYNGR3-203ENST00000563869 PIGBQ92521 554 aa24.94■■□□□ 1.58
SYNGR3-203ENST00000563869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.93■■□□□ 1.58
SYNGR3-203ENST00000563869 RUNDC1Q96C34 613 aa24.93■■□□□ 1.58
SYNGR3-203ENST00000563869 PHF14O94880 888 aa24.92■■□□□ 1.58
SYNGR3-203ENST00000563869 SSFA2P28290 1259 aa24.92■■□□□ 1.58
SYNGR3-203ENST00000563869 AKAP4Q5JQC9 854 aa24.92■■□□□ 1.58
SYNGR3-203ENST00000563869 ADAMTS8Q9UP79 889 aa24.92■■□□□ 1.58
SYNGR3-203ENST00000563869 LMOD3Q0VAK6 560 aa24.91■■□□□ 1.58
SYNGR3-203ENST00000563869 ZNF530Q6P9A1 599 aaPredicted RBP24.91■■□□□ 1.58
SYNGR3-203ENST00000563869 NGEFQ8N5V2 710 aa24.91■■□□□ 1.58
SYNGR3-203ENST00000563869 VIRMAQ69YN4 1812 aaKnown RBP24.91■■□□□ 1.58
SYNGR3-203ENST00000563869 HTATSF1O43719 755 aaKnown RBP24.9■■□□□ 1.58
SYNGR3-203ENST00000563869 HSPA6P17066 643 aa24.9■■□□□ 1.58
SYNGR3-203ENST00000563869 SMIM5Q71RC9 77 aa24.9■■□□□ 1.58
SYNGR3-203ENST00000563869 ZNF526Q8TF50 670 aaPredicted RBP24.9■■□□□ 1.58
SYNGR3-203ENST00000563869 LOC102724428A0A0B4J2F2 783 aa24.89■■□□□ 1.58
SYNGR3-203ENST00000563869 SIK1P57059 783 aa24.89■■□□□ 1.58
SYNGR3-203ENST00000563869 MIER1Q8N108 512 aa24.89■■□□□ 1.58
SYNGR3-203ENST00000563869 LINC00116Q8NCU8 138 aa24.89■■□□□ 1.58
SYNGR3-203ENST00000563869 DCAF5Q96JK2 942 aa24.89■■□□□ 1.58
SYNGR3-203ENST00000563869 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
SYNGR3-203ENST00000563869 PHKG2P15735 406 aa24.88■■□□□ 1.57
SYNGR3-203ENST00000563869 NCBP3Q53F19 620 aaKnown RBP24.88■■□□□ 1.57
SYNGR3-203ENST00000563869 PLEKHF1Q96S99 279 aa24.88■■□□□ 1.57
SYNGR3-203ENST00000563869 CICQ96RK0 1608 aaPredicted RBP24.86■■□□□ 1.57
SYNGR3-203ENST00000563869 DLG5Q8TDM6 1919 aa24.86■■□□□ 1.57
SYNGR3-203ENST00000563869 GNAT3A8MTJ3 354 aa24.86■■□□□ 1.57
SYNGR3-203ENST00000563869 RTF1Q92541 710 aaKnown RBP24.86■■□□□ 1.57
SYNGR3-203ENST00000563869 TMOD3Q9NYL9 352 aa24.86■■□□□ 1.57
SYNGR3-203ENST00000563869 KIF13BQ9NQT8 1826 aa24.85■■□□□ 1.57
SYNGR3-203ENST00000563869 MTHFSDQ2M296 383 aaKnown RBP24.85■■□□□ 1.57
SYNGR3-203ENST00000563869 WWC3Q9ULE0 1092 aa24.85■■□□□ 1.57
SYNGR3-203ENST00000563869 NFE2L2Q16236 605 aa24.84■■□□□ 1.57
SYNGR3-203ENST00000563869 CCDC184Q52MB2 194 aa24.84■■□□□ 1.57
SYNGR3-203ENST00000563869 ERVV-2B6SEH9 535 aa24.83■■□□□ 1.57
SYNGR3-203ENST00000563869 GNPATO15228 680 aa24.83■■□□□ 1.57
SYNGR3-203ENST00000563869 ITPK1Q13572 414 aa24.83■■□□□ 1.57
SYNGR3-203ENST00000563869 ASAP1Q9ULH1 1129 aa24.83■■□□□ 1.57
SYNGR3-203ENST00000563869 ADAMTS7Q9UKP4 1686 aa24.82■■□□□ 1.56
SYNGR3-203ENST00000563869 ATP6V1AP38606 617 aa24.82■■□□□ 1.56
SYNGR3-203ENST00000563869 KIAA1551Q9HCM1 1747 aa24.82■■□□□ 1.56
SYNGR3-203ENST00000563869 FAM9BQ8IZU0 186 aa24.81■■□□□ 1.56
SYNGR3-203ENST00000563869 PHACTR3Q96KR7 559 aa24.81■■□□□ 1.56
SYNGR3-203ENST00000563869 KIF3CO14782 793 aa24.8■■□□□ 1.56
SYNGR3-203ENST00000563869 CALD1Q05682 793 aaKnown RBP24.8■■□□□ 1.56
SYNGR3-203ENST00000563869 ZNF831Q5JPB2 1677 aa24.79■■□□□ 1.56
SYNGR3-203ENST00000563869 N4BP2Q86UW6 1770 aaPredicted RBP24.79■■□□□ 1.56
SYNGR3-203ENST00000563869 PXDNLA1KZ92 1463 aa24.78■■□□□ 1.56
SYNGR3-203ENST00000563869 MMP10P09238 476 aa24.78■■□□□ 1.56
SYNGR3-203ENST00000563869 TMPOP42166 694 aaKnown RBP24.78■■□□□ 1.56
SYNGR3-203ENST00000563869 ATG3Q9NT62 314 aa24.78■■□□□ 1.56
SYNGR3-203ENST00000563869 RIPK4P57078 832 aa24.76■■□□□ 1.55
SYNGR3-203ENST00000563869 TGFB2P61812 414 aa24.76■■□□□ 1.55
SYNGR3-203ENST00000563869 CCDC146Q8IYE0 955 aa24.76■■□□□ 1.55
SYNGR3-203ENST00000563869 TEFQ10587 303 aa24.75■■□□□ 1.55
SYNGR3-203ENST00000563869 MRC1P22897 1456 aa24.75■■□□□ 1.55
SYNGR3-203ENST00000563869 COL5A3P25940 1745 aaPredicted RBP24.75■■□□□ 1.55
SYNGR3-203ENST00000563869 CABP4P57796 275 aa24.74■■□□□ 1.55
SYNGR3-203ENST00000563869 CCDC27Q2M243 656 aa24.74■■□□□ 1.55
SYNGR3-203ENST00000563869 TRAPPC3LQ5T215 181 aa24.74■■□□□ 1.55
SYNGR3-203ENST00000563869 NLGN1Q8N2Q7 840 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms