RNA–Protein interactions for RNA: ENST00000563438.1

LCTL-204, Transcript of lactase like, humanhuman

TSL 4

Gene LCTL, Length 571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCTL-204ENST00000563438 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
LCTL-204ENST00000563438 AK7Q96M32 723 aa16.53■□□□□ 0.24
LCTL-204ENST00000563438 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
LCTL-204ENST00000563438 GNAT3A8MTJ3 354 aa16.52■□□□□ 0.24
LCTL-204ENST00000563438 CNGB1Q14028 1251 aaPredicted RBP16.52■□□□□ 0.24
LCTL-204ENST00000563438 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
LCTL-204ENST00000563438 LRRC4BQ9NT99 713 aa16.52■□□□□ 0.24
LCTL-204ENST00000563438 ADRA2BP18089 450 aa16.51■□□□□ 0.23
LCTL-204ENST00000563438 SSFA2P28290 1259 aa16.51■□□□□ 0.23
LCTL-204ENST00000563438 POLD1P28340 1107 aa16.51■□□□□ 0.23
LCTL-204ENST00000563438 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
LCTL-204ENST00000563438 RTF1Q92541 710 aaKnown RBP16.51■□□□□ 0.23
LCTL-204ENST00000563438 COL24A1Q17RW2 1714 aa16.5■□□□□ 0.23
LCTL-204ENST00000563438 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
LCTL-204ENST00000563438 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
LCTL-204ENST00000563438 TEFQ10587 303 aa16.5■□□□□ 0.23
LCTL-204ENST00000563438 RSPH6AQ9H0K4 717 aa16.5■□□□□ 0.23
LCTL-204ENST00000563438 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
LCTL-204ENST00000563438 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
LCTL-204ENST00000563438 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
LCTL-204ENST00000563438 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
LCTL-204ENST00000563438 TTC5Q8N0Z6 440 aa16.49■□□□□ 0.23
LCTL-204ENST00000563438 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
LCTL-204ENST00000563438 UBR3Q6ZT12 1888 aa16.48■□□□□ 0.23
LCTL-204ENST00000563438 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
LCTL-204ENST00000563438 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
LCTL-204ENST00000563438 VSIG10Q8N0Z9 540 aa16.48■□□□□ 0.23
LCTL-204ENST00000563438 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
LCTL-204ENST00000563438 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
LCTL-204ENST00000563438 TEX13AQ9BXU3 409 aaPredicted RBP16.47■□□□□ 0.23
LCTL-204ENST00000563438 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
LCTL-204ENST00000563438 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.23
LCTL-204ENST00000563438 UBR2Q8IWV8 1755 aa16.46■□□□□ 0.23
LCTL-204ENST00000563438 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
LCTL-204ENST00000563438 NFATC2IPQ8NCF5 419 aa16.46■□□□□ 0.23
LCTL-204ENST00000563438 ASAP1Q9ULH1 1129 aa16.46■□□□□ 0.23
LCTL-204ENST00000563438 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.23
LCTL-204ENST00000563438 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
LCTL-204ENST00000563438 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
LCTL-204ENST00000563438 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
LCTL-204ENST00000563438 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
LCTL-204ENST00000563438 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
LCTL-204ENST00000563438 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
LCTL-204ENST00000563438 MSH5O43196 834 aa16.42■□□□□ 0.22
LCTL-204ENST00000563438 ZBTB7AO95365 584 aa16.42■□□□□ 0.22
LCTL-204ENST00000563438 TJP1Q07157 1748 aa16.42■□□□□ 0.22
LCTL-204ENST00000563438 GNPATO15228 680 aa16.41■□□□□ 0.22
LCTL-204ENST00000563438 STARD3NLO95772 234 aa16.41■□□□□ 0.22
LCTL-204ENST00000563438 NPM2Q86SE8 214 aaKnown RBP16.41■□□□□ 0.22
LCTL-204ENST00000563438 ARXQ96QS3 562 aa16.41■□□□□ 0.22
LCTL-204ENST00000563438 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
LCTL-204ENST00000563438 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
LCTL-204ENST00000563438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.39■□□□□ 0.21
LCTL-204ENST00000563438 PTGER2P43116 358 aa16.39■□□□□ 0.21
LCTL-204ENST00000563438 TRAPPC3LQ5T215 181 aa16.39■□□□□ 0.21
LCTL-204ENST00000563438 ZNF790Q6PG37 636 aa16.39■□□□□ 0.21
LCTL-204ENST00000563438 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
LCTL-204ENST00000563438 SGIP1Q9BQI5 828 aa16.39■□□□□ 0.21
LCTL-204ENST00000563438 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
LCTL-204ENST00000563438 ANP32CO43423 234 aa16.38■□□□□ 0.21
LCTL-204ENST00000563438 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
LCTL-204ENST00000563438 RPS6KA4O75676 772 aa16.38■□□□□ 0.21
LCTL-204ENST00000563438 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
LCTL-204ENST00000563438 NLGN1Q8N2Q7 840 aa16.38■□□□□ 0.21
LCTL-204ENST00000563438 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
LCTL-204ENST00000563438 BABAM1Q9NWV8 329 aa16.38■□□□□ 0.21
LCTL-204ENST00000563438 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
LCTL-204ENST00000563438 RFC4P35249 363 aa16.37■□□□□ 0.21
LCTL-204ENST00000563438 ITPK1Q13572 414 aa16.37■□□□□ 0.21
LCTL-204ENST00000563438 COL23A1Q86Y22 540 aaPredicted RBP16.37■□□□□ 0.21
LCTL-204ENST00000563438 ATF5Q9Y2D1 282 aaPredicted RBP16.37■□□□□ 0.21
LCTL-204ENST00000563438 HEG1Q9ULI3 1381 aa16.37■□□□□ 0.21
LCTL-204ENST00000563438 A0A087WZG4 1122 aa16.36■□□□□ 0.21
LCTL-204ENST00000563438 KCNQ4P56696 695 aa16.36■□□□□ 0.21
LCTL-204ENST00000563438 IL17REQ8NFR9 667 aa16.36■□□□□ 0.21
LCTL-204ENST00000563438 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
LCTL-204ENST00000563438 PLEKHF1Q96S99 279 aa16.36■□□□□ 0.21
LCTL-204ENST00000563438 C4AP0C0L4 1744 aa16.36■□□□□ 0.21
LCTL-204ENST00000563438 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
LCTL-204ENST00000563438 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
LCTL-204ENST00000563438 CCDC87Q9NVE4 849 aa16.35■□□□□ 0.21
LCTL-204ENST00000563438 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
LCTL-204ENST00000563438 PHF14O94880 888 aa16.34■□□□□ 0.21
LCTL-204ENST00000563438 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
LCTL-204ENST00000563438 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
LCTL-204ENST00000563438 CD2APQ9Y5K6 639 aa16.34■□□□□ 0.21
LCTL-204ENST00000563438 RGL2O15211 777 aa16.33■□□□□ 0.2
LCTL-204ENST00000563438 KDM3BQ7LBC6 1761 aa16.33■□□□□ 0.2
LCTL-204ENST00000563438 ZPR1O75312 459 aa16.32■□□□□ 0.2
LCTL-204ENST00000563438 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
LCTL-204ENST00000563438 MYH14Q7Z406 1995 aaKnown RBP16.32■□□□□ 0.2
LCTL-204ENST00000563438 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
LCTL-204ENST00000563438 PDGFDQ9GZP0 370 aaPredicted RBP16.32■□□□□ 0.2
LCTL-204ENST00000563438 COL15A1P39059 1388 aa16.31■□□□□ 0.2
LCTL-204ENST00000563438 CYP19A1P11511 503 aaPredicted RBP16.31■□□□□ 0.2
LCTL-204ENST00000563438 SLC4A9Q96Q91 983 aa16.31■□□□□ 0.2
LCTL-204ENST00000563438 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
LCTL-204ENST00000563438 FHDC1Q9C0D6 1143 aaPredicted RBP16.31■□□□□ 0.2
LCTL-204ENST00000563438 USP42Q9H9J4 1324 aaKnown RBP16.3■□□□□ 0.2
LCTL-204ENST00000563438 IL6STP40189 918 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms