RNA–Protein interactions for RNA: ENST00000563412.1

TUBGCP4-205, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-205ENST00000563412 SMC1BQ8NDV3 1235 aa8.69□□□□□ -1.02
TUBGCP4-205ENST00000563412 GGNBP2Q9H3C7 697 aa8.69□□□□□ -1.02
TUBGCP4-205ENST00000563412 MRS2Q9HD23 443 aa8.69□□□□□ -1.02
TUBGCP4-205ENST00000563412 AXIN2Q9Y2T1 843 aa8.69□□□□□ -1.02
TUBGCP4-205ENST00000563412 TTC21AQ8NDW8 1320 aa8.69□□□□□ -1.02
TUBGCP4-205ENST00000563412 PCNTO95613 3336 aa8.69□□□□□ -1.02
TUBGCP4-205ENST00000563412 USP31Q70CQ4 1352 aa8.69□□□□□ -1.02
TUBGCP4-205ENST00000563412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.68□□□□□ -1.02
TUBGCP4-205ENST00000563412 KCNH5Q8NCM2 988 aa8.68□□□□□ -1.02
TUBGCP4-205ENST00000563412 PNISRQ8TF01 805 aaKnown RBP8.68□□□□□ -1.02
TUBGCP4-205ENST00000563412 KDM2BQ8NHM5 1336 aa8.68□□□□□ -1.02
TUBGCP4-205ENST00000563412 SMG6Q86US8 1419 aaKnown RBP8.68□□□□□ -1.02
TUBGCP4-205ENST00000563412 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
TUBGCP4-205ENST00000563412 IGSF1Q8N6C5 1336 aa8.67□□□□□ -1.02
TUBGCP4-205ENST00000563412 LMO7Q8WWI1 1683 aa8.67□□□□□ -1.02
TUBGCP4-205ENST00000563412 KAT6BQ8WYB5 2073 aa8.66□□□□□ -1.02
TUBGCP4-205ENST00000563412 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
TUBGCP4-205ENST00000563412 COL3A1P02461 1466 aaPredicted RBP8.66□□□□□ -1.02
TUBGCP4-205ENST00000563412 INSRP06213 1382 aa8.66□□□□□ -1.02
TUBGCP4-205ENST00000563412 RGS19P49795 217 aa8.66□□□□□ -1.02
TUBGCP4-205ENST00000563412 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
TUBGCP4-205ENST00000563412 IL2RBP14784 551 aa8.65□□□□□ -1.02
TUBGCP4-205ENST00000563412 MSL1Q68DK7 614 aa8.65□□□□□ -1.02
TUBGCP4-205ENST00000563412 ARHGAP27Q6ZUM4 889 aa8.65□□□□□ -1.02
TUBGCP4-205ENST00000563412 WDR90Q96KV7 1748 aa8.65□□□□□ -1.03
TUBGCP4-205ENST00000563412 LRRC37A3O60309 1634 aa8.65□□□□□ -1.03
TUBGCP4-205ENST00000563412 PHRF1Q9P1Y6 1649 aaKnown RBP8.65□□□□□ -1.03
TUBGCP4-205ENST00000563412 TNNT2P45379 298 aaPredicted RBP8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 MTHFSP49914 203 aa8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 TGFB2P61812 414 aa8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 COG3Q96JB2 828 aa8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 CCNL1Q9UK58 526 aaPredicted RBP8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 PAPPAQ13219 1627 aa8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 SLIT3O75094 1523 aa8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 MAP2P11137 1827 aaKnown RBP8.64□□□□□ -1.03
TUBGCP4-205ENST00000563412 RGL2O15211 777 aa8.63□□□□□ -1.03
TUBGCP4-205ENST00000563412 CTCFP49711 727 aaPredicted RBP8.63□□□□□ -1.03
TUBGCP4-205ENST00000563412 POLA2Q14181 598 aa8.63□□□□□ -1.03
TUBGCP4-205ENST00000563412 POLKQ9UBT6 870 aa8.63□□□□□ -1.03
TUBGCP4-205ENST00000563412 NFAT5O94916 1531 aa8.63□□□□□ -1.03
TUBGCP4-205ENST00000563412 FBLN1P23142 703 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 PRIM1P49642 420 aaKnown RBP8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 KCNQ4P56696 695 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 C9orf131Q5VYM1 1079 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 FAM9BQ8IZU0 186 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 AIDAQ96BJ3 306 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 SYTL4Q96C24 671 aaPredicted RBP8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 ABHD8Q96I13 439 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 NLRP2Q9NX02 1062 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 QSER1Q2KHR3 1735 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 TNS2Q63HR2 1409 aa8.62□□□□□ -1.03
TUBGCP4-205ENST00000563412 PLEKHG2Q9H7P9 1386 aa8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 VEGFAP15692 232 aaPredicted RBP8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 TMEM132AQ24JP5 1023 aa8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 HOMEZQ8IX15 550 aa8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 DDX54Q8TDD1 881 aaKnown RBP8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 YTHDC1Q96MU7 727 aaKnown RBP8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 BCS1LQ9Y276 419 aa8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 ZBTB12Q9Y330 459 aaPredicted RBP8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 EMILIN1Q9Y6C2 1016 aa8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 C10orf71Q711Q0 1435 aa8.61□□□□□ -1.03
TUBGCP4-205ENST00000563412 ADAMTS8Q9UP79 889 aa8.6□□□□□ -1.03
TUBGCP4-205ENST00000563412 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
TUBGCP4-205ENST00000563412 FOXN1O15353 648 aa8.59□□□□□ -1.03
TUBGCP4-205ENST00000563412 RRS1Q15050 365 aaKnown RBP8.59□□□□□ -1.03
TUBGCP4-205ENST00000563412 CFAP53Q96M91 514 aa8.59□□□□□ -1.03
TUBGCP4-205ENST00000563412 KIF24Q5T7B8 1368 aa8.59□□□□□ -1.03
TUBGCP4-205ENST00000563412 MAP3K19Q56UN5 1328 aa8.58□□□□□ -1.04
TUBGCP4-205ENST00000563412 FCHSD2O94868 740 aa8.58□□□□□ -1.04
TUBGCP4-205ENST00000563412 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
TUBGCP4-205ENST00000563412 CREBZFQ9NS37 354 aa8.58□□□□□ -1.04
TUBGCP4-205ENST00000563412 LTN1O94822 1766 aa8.58□□□□□ -1.04
TUBGCP4-205ENST00000563412 IL13P35225 146 aa8.57□□□□□ -1.04
TUBGCP4-205ENST00000563412 HNRNPUQ00839 825 aaKnown RBP eCLIP8.57□□□□□ -1.04
TUBGCP4-205ENST00000563412 WDR43Q15061 677 aaKnown RBP eCLIP8.57□□□□□ -1.04
TUBGCP4-205ENST00000563412 RTL1A6NKG5 1358 aa8.57□□□□□ -1.04
TUBGCP4-205ENST00000563412 FLT4P35916 1363 aa8.57□□□□□ -1.04
TUBGCP4-205ENST00000563412 ZBED9Q6R2W3 1325 aa8.56□□□□□ -1.04
TUBGCP4-205ENST00000563412 ZC3H4Q9UPT8 1303 aaKnown RBP8.56□□□□□ -1.04
TUBGCP4-205ENST00000563412 A0A0G2JLW4 131 aa8.56□□□□□ -1.04
TUBGCP4-205ENST00000563412 CCDC85CA6NKD9 419 aa8.56□□□□□ -1.04
TUBGCP4-205ENST00000563412 DIAPH1O60610 1272 aaKnown RBP8.56□□□□□ -1.04
TUBGCP4-205ENST00000563412 BTAF1O14981 1849 aa8.56□□□□□ -1.04
TUBGCP4-205ENST00000563412 COL18A1P39060 1754 aa8.56□□□□□ -1.04
TUBGCP4-205ENST00000563412 PDE4DIPQ5VU43 2346 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 ABCC6O95255 1503 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 LBX1P52954 281 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 NLGN1Q8N2Q7 840 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 AK7Q96M32 723 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 WBP1LQ9NX94 342 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 RNF181Q9P0P0 153 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 PIM2Q9P1W9 311 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 PXDNLA1KZ92 1463 aa8.55□□□□□ -1.04
TUBGCP4-205ENST00000563412 ERBB3P21860 1342 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 GLTPD2A6NH11 291 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 PPM1GO15355 546 aaPredicted RBP8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 SOX12O15370 315 aa8.54□□□□□ -1.04
TUBGCP4-205ENST00000563412 SSFA2P28290 1259 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms