RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 PRKAR2BP31323 418 aa37.89■■■■□ 3.66
NME3-203ENST00000563367 RALBP1Q15311 655 aa37.89■■■■□ 3.66
NME3-203ENST00000563367 C4BP0C0L5 1744 aa37.89■■■■□ 3.66
NME3-203ENST00000563367 PHACTR3Q96KR7 559 aa37.88■■■■□ 3.65
NME3-203ENST00000563367 ATF5Q9Y2D1 282 aaPredicted RBP37.87■■■■□ 3.65
NME3-203ENST00000563367 RNMTO43148 476 aaKnown RBP37.86■■■■□ 3.65
NME3-203ENST00000563367 ITPK1Q13572 414 aa37.84■■■■□ 3.65
NME3-203ENST00000563367 LINC00116Q8NCU8 138 aa37.83■■■■□ 3.65
NME3-203ENST00000563367 GAS2L2Q8NHY3 880 aa37.83■■■■□ 3.65
NME3-203ENST00000563367 MTFR1LQ9H019 292 aa37.83■■■■□ 3.65
NME3-203ENST00000563367 MRC1P22897 1456 aa37.83■■■■□ 3.65
NME3-203ENST00000563367 ZNF831Q5JPB2 1677 aa37.82■■■■□ 3.65
NME3-203ENST00000563367 UBR3Q6ZT12 1888 aa37.82■■■■□ 3.65
NME3-203ENST00000563367 ATP6V1AP38606 617 aa37.82■■■■□ 3.64
NME3-203ENST00000563367 PTGER2P43116 358 aa37.82■■■■□ 3.64
NME3-203ENST00000563367 SLC4A9Q96Q91 983 aa37.82■■■■□ 3.64
NME3-203ENST00000563367 SLC52A2Q9HAB3 445 aa37.82■■■■□ 3.64
NME3-203ENST00000563367 FCHSD2O94868 740 aa37.81■■■■□ 3.64
NME3-203ENST00000563367 RBM42Q9BTD8 480 aaKnown RBP37.81■■■■□ 3.64
NME3-203ENST00000563367 HMGB2P26583 209 aaKnown RBP37.8■■■■□ 3.64
NME3-203ENST00000563367 MAP3K5Q99683 1374 aa37.8■■■■□ 3.64
NME3-203ENST00000563367 COL23A1Q86Y22 540 aaPredicted RBP37.78■■■■□ 3.64
NME3-203ENST00000563367 GNAT3A8MTJ3 354 aa37.77■■■■□ 3.64
NME3-203ENST00000563367 COL5A3P25940 1745 aaPredicted RBP37.76■■■■□ 3.64
NME3-203ENST00000563367 COL24A1Q17RW2 1714 aa37.76■■■■□ 3.64
NME3-203ENST00000563367 AMIGO3Q86WK7 504 aa37.76■■■■□ 3.64
NME3-203ENST00000563367 IL17REQ8NFR9 667 aa37.76■■■■□ 3.64
NME3-203ENST00000563367 SGIP1Q9BQI5 828 aa37.76■■■■□ 3.64
NME3-203ENST00000563367 PPP1R1BQ9UD71 204 aaPredicted RBP37.76■■■■□ 3.64
NME3-203ENST00000563367 AK7Q96M32 723 aa37.75■■■■□ 3.63
NME3-203ENST00000563367 MYBBP1AQ9BQG0 1328 aaKnown RBP37.75■■■■□ 3.63
NME3-203ENST00000563367 PTCD1O75127 700 aaKnown RBP37.74■■■■□ 3.63
NME3-203ENST00000563367 SLC16A10Q8TF71 515 aa37.74■■■■□ 3.63
NME3-203ENST00000563367 SIPA1L3O60292 1781 aaPredicted RBP37.73■■■■□ 3.63
NME3-203ENST00000563367 SMIM5Q71RC9 77 aa37.73■■■■□ 3.63
NME3-203ENST00000563367 MYH14Q7Z406 1995 aaKnown RBP37.71■■■■□ 3.63
NME3-203ENST00000563367 TJP1Q07157 1748 aa37.7■■■■□ 3.63
NME3-203ENST00000563367 MSH5O43196 834 aa37.7■■■■□ 3.63
NME3-203ENST00000563367 SLC39A6Q13433 755 aa37.7■■■■□ 3.63
NME3-203ENST00000563367 DLG5Q8TDM6 1919 aa37.68■■■■□ 3.62
NME3-203ENST00000563367 ZNF316A6NFI3 1004 aaPredicted RBP37.68■■■■□ 3.62
NME3-203ENST00000563367 PRKRIP1Q9H875 184 aaPredicted RBP37.68■■■■□ 3.62
NME3-203ENST00000563367 FLAD1Q8NFF5 587 aa37.67■■■■□ 3.62
NME3-203ENST00000563367 CICQ96RK0 1608 aaPredicted RBP37.67■■■■□ 3.62
NME3-203ENST00000563367 UBR2Q8IWV8 1755 aa37.66■■■■□ 3.62
NME3-203ENST00000563367 PHF14O94880 888 aa37.66■■■■□ 3.62
NME3-203ENST00000563367 PLEKHF1Q96S99 279 aa37.66■■■■□ 3.62
NME3-203ENST00000563367 CEMIPQ8WUJ3 1361 aa37.66■■■■□ 3.62
NME3-203ENST00000563367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.65■■■■□ 3.62
NME3-203ENST00000563367 GNPATO15228 680 aa37.65■■■■□ 3.62
NME3-203ENST00000563367 KCPQ6ZWJ8 1503 aa37.65■■■■□ 3.62
NME3-203ENST00000563367 TEFQ10587 303 aa37.63■■■■□ 3.61
NME3-203ENST00000563367 SSFA2P28290 1259 aa37.62■■■■□ 3.61
NME3-203ENST00000563367 RC3H1Q5TC82 1133 aaKnown RBP37.61■■■■□ 3.61
NME3-203ENST00000563367 CNTNAP4Q9C0A0 1308 aa37.61■■■■□ 3.61
NME3-203ENST00000563367 ARXQ96QS3 562 aa37.6■■■■□ 3.61
NME3-203ENST00000563367 MSL1Q68DK7 614 aa37.59■■■■□ 3.61
NME3-203ENST00000563367 MCM10Q7L590 875 aa37.59■■■■□ 3.61
NME3-203ENST00000563367 DNAJC10Q8IXB1 793 aa37.57■■■■□ 3.6
NME3-203ENST00000563367 NEFMP07197 916 aa37.56■■■■□ 3.6
NME3-203ENST00000563367 POLD1P28340 1107 aa37.56■■■■□ 3.6
NME3-203ENST00000563367 DCTN1Q14203 1278 aa37.56■■■■□ 3.6
NME3-203ENST00000563367 RTF1Q92541 710 aaKnown RBP37.56■■■■□ 3.6
NME3-203ENST00000563367 FHDC1Q9C0D6 1143 aaPredicted RBP37.55■■■■□ 3.6
NME3-203ENST00000563367 RTCBQ9Y3I0 505 aaKnown RBP37.55■■■■□ 3.6
NME3-203ENST00000563367 CRKLP46109 303 aaKnown RBP37.54■■■■□ 3.6
NME3-203ENST00000563367 PNNQ9H307 717 aaKnown RBP37.54■■■■□ 3.6
NME3-203ENST00000563367 HTATSF1O43719 755 aaKnown RBP37.53■■■■□ 3.6
NME3-203ENST00000563367 ZNF790Q6PG37 636 aa37.53■■■■□ 3.6
NME3-203ENST00000563367 RPS6KA4O75676 772 aa37.52■■■■□ 3.6
NME3-203ENST00000563367 TTC5Q8N0Z6 440 aa37.52■■■■□ 3.6
NME3-203ENST00000563367 NFE2L2Q16236 605 aa37.51■■■■□ 3.6
NME3-203ENST00000563367 INTS5Q6P9B9 1019 aaKnown RBP37.51■■■■□ 3.6
NME3-203ENST00000563367 C4AP0C0L4 1744 aa37.5■■■■□ 3.59
NME3-203ENST00000563367 TRAPPC3LQ5T215 181 aa37.5■■■■□ 3.59
NME3-203ENST00000563367 ZNF496Q96IT1 587 aaPredicted RBP37.5■■■■□ 3.59
NME3-203ENST00000563367 SYT17Q9BSW7 474 aa37.5■■■■□ 3.59
NME3-203ENST00000563367 BTBD11A6QL63 1104 aa37.49■■■■□ 3.59
NME3-203ENST00000563367 KCNQ3O43525 872 aa37.49■■■■□ 3.59
NME3-203ENST00000563367 VSIG10Q8N0Z9 540 aa37.49■■■■□ 3.59
NME3-203ENST00000563367 MAPK8IP3Q9UPT6 1336 aa37.49■■■■□ 3.59
NME3-203ENST00000563367 CYP19A1P11511 503 aaPredicted RBP37.48■■■■□ 3.59
NME3-203ENST00000563367 ARHGEF1Q92888 912 aaKnown RBP37.48■■■■□ 3.59
NME3-203ENST00000563367 ADRA2BP18089 450 aa37.46■■■■□ 3.59
NME3-203ENST00000563367 CCDC87Q9NVE4 849 aa37.45■■■■□ 3.59
NME3-203ENST00000563367 HEG1Q9ULI3 1381 aa37.44■■■■□ 3.58
NME3-203ENST00000563367 WDR43Q15061 677 aaKnown RBP eCLIP37.43■■■■□ 3.58
NME3-203ENST00000563367 CCDC146Q8IYE0 955 aa37.42■■■■□ 3.58
NME3-203ENST00000563367 ADAMTS8Q9UP79 889 aa37.41■■■■□ 3.58
NME3-203ENST00000563367 RFC4P35249 363 aa37.4■■■■□ 3.58
NME3-203ENST00000563367 KLHL34Q8N239 644 aa37.4■■■■□ 3.58
NME3-203ENST00000563367 FMNL2Q96PY5 1086 aa37.4■■■■□ 3.58
NME3-203ENST00000563367 THUMPD2Q9BTF0 503 aaKnown RBP37.4■■■■□ 3.58
NME3-203ENST00000563367 TAF7Q15545 349 aaPredicted RBP37.39■■■■□ 3.58
NME3-203ENST00000563367 ZBTB1Q9Y2K1 713 aa37.38■■■■□ 3.57
NME3-203ENST00000563367 SOS1Q07889 1333 aaPredicted RBP37.37■■■■□ 3.57
NME3-203ENST00000563367 MIS18AQ9NYP9 233 aa37.37■■■■□ 3.57
NME3-203ENST00000563367 TMPOP42166 694 aaKnown RBP37.36■■■■□ 3.57
NME3-203ENST00000563367 RIPK4P57078 832 aa37.36■■■■□ 3.57
NME3-203ENST00000563367 KDM3BQ7LBC6 1761 aa37.36■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms