RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
NSMCE1-204ENST00000563273 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
NSMCE1-204ENST00000563273 ITPK1Q13572 414 aa16.43■□□□□ 0.22
NSMCE1-204ENST00000563273 SYT17Q9BSW7 474 aa16.43■□□□□ 0.22
NSMCE1-204ENST00000563273 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
NSMCE1-204ENST00000563273 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
NSMCE1-204ENST00000563273 MTHFSDQ2M296 383 aaKnown RBP16.42■□□□□ 0.22
NSMCE1-204ENST00000563273 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
NSMCE1-204ENST00000563273 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
NSMCE1-204ENST00000563273 NUDCQ9Y266 331 aa16.42■□□□□ 0.22
NSMCE1-204ENST00000563273 MRC1P22897 1456 aa16.42■□□□□ 0.22
NSMCE1-204ENST00000563273 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
NSMCE1-204ENST00000563273 U2SURPO15042 1029 aaKnown RBP16.41■□□□□ 0.22
NSMCE1-204ENST00000563273 RNMTO43148 476 aaKnown RBP16.41■□□□□ 0.22
NSMCE1-204ENST00000563273 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
NSMCE1-204ENST00000563273 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
NSMCE1-204ENST00000563273 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
NSMCE1-204ENST00000563273 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
NSMCE1-204ENST00000563273 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
NSMCE1-204ENST00000563273 CNGB1Q14028 1251 aaPredicted RBP16.4■□□□□ 0.22
NSMCE1-204ENST00000563273 CNTNAP4Q9C0A0 1308 aa16.4■□□□□ 0.22
NSMCE1-204ENST00000563273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.39■□□□□ 0.21
NSMCE1-204ENST00000563273 MSH5O43196 834 aa16.39■□□□□ 0.21
NSMCE1-204ENST00000563273 ADAMTS7Q9UKP4 1686 aa16.38■□□□□ 0.21
NSMCE1-204ENST00000563273 GNPATO15228 680 aa16.38■□□□□ 0.21
NSMCE1-204ENST00000563273 ADRA2BP18089 450 aa16.38■□□□□ 0.21
NSMCE1-204ENST00000563273 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
NSMCE1-204ENST00000563273 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
NSMCE1-204ENST00000563273 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
NSMCE1-204ENST00000563273 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
NSMCE1-204ENST00000563273 FCHSD2O94868 740 aa16.37■□□□□ 0.21
NSMCE1-204ENST00000563273 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
NSMCE1-204ENST00000563273 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
NSMCE1-204ENST00000563273 CICQ96RK0 1608 aaPredicted RBP16.36■□□□□ 0.21
NSMCE1-204ENST00000563273 PTCD1O75127 700 aaKnown RBP16.35■□□□□ 0.21
NSMCE1-204ENST00000563273 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
NSMCE1-204ENST00000563273 PHF14O94880 888 aa16.35■□□□□ 0.21
NSMCE1-204ENST00000563273 PRKAR2BP31323 418 aa16.35■□□□□ 0.21
NSMCE1-204ENST00000563273 SCN11AQ9UI33 1791 aa16.35■□□□□ 0.21
NSMCE1-204ENST00000563273 UBR3Q6ZT12 1888 aa16.34■□□□□ 0.21
NSMCE1-204ENST00000563273 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
NSMCE1-204ENST00000563273 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.21
NSMCE1-204ENST00000563273 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
NSMCE1-204ENST00000563273 CEMIPQ8WUJ3 1361 aa16.34■□□□□ 0.21
NSMCE1-204ENST00000563273 RALBP1Q15311 655 aa16.33■□□□□ 0.2
NSMCE1-204ENST00000563273 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
NSMCE1-204ENST00000563273 MSL1Q68DK7 614 aa16.33■□□□□ 0.2
NSMCE1-204ENST00000563273 CD2APQ9Y5K6 639 aa16.33■□□□□ 0.2
NSMCE1-204ENST00000563273 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
NSMCE1-204ENST00000563273 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
NSMCE1-204ENST00000563273 PHACTR3Q96KR7 559 aa16.32■□□□□ 0.2
NSMCE1-204ENST00000563273 TEFQ10587 303 aa16.31■□□□□ 0.2
NSMCE1-204ENST00000563273 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
NSMCE1-204ENST00000563273 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
NSMCE1-204ENST00000563273 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
NSMCE1-204ENST00000563273 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
NSMCE1-204ENST00000563273 NLGN1Q8N2Q7 840 aa16.3■□□□□ 0.2
NSMCE1-204ENST00000563273 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
NSMCE1-204ENST00000563273 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
NSMCE1-204ENST00000563273 INTS5Q6P9B9 1019 aaKnown RBP16.29■□□□□ 0.2
NSMCE1-204ENST00000563273 CYP19A1P11511 503 aaPredicted RBP16.28■□□□□ 0.2
NSMCE1-204ENST00000563273 RFC4P35249 363 aa16.28■□□□□ 0.2
NSMCE1-204ENST00000563273 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
NSMCE1-204ENST00000563273 ZNF790Q6PG37 636 aa16.28■□□□□ 0.2
NSMCE1-204ENST00000563273 DNAJC10Q8IXB1 793 aa16.28■□□□□ 0.2
NSMCE1-204ENST00000563273 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
NSMCE1-204ENST00000563273 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
NSMCE1-204ENST00000563273 GYS1P13807 737 aa16.27■□□□□ 0.2
NSMCE1-204ENST00000563273 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
NSMCE1-204ENST00000563273 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
NSMCE1-204ENST00000563273 NLGN2Q8NFZ4 835 aa16.27■□□□□ 0.2
NSMCE1-204ENST00000563273 TEX13AQ9BXU3 409 aaPredicted RBP16.27■□□□□ 0.2
NSMCE1-204ENST00000563273 PNNQ9H307 717 aaKnown RBP16.27■□□□□ 0.2
NSMCE1-204ENST00000563273 TJP1Q07157 1748 aa16.27■□□□□ 0.19
NSMCE1-204ENST00000563273 YY1P25490 414 aa16.26■□□□□ 0.19
NSMCE1-204ENST00000563273 SOS1Q07889 1333 aaPredicted RBP16.25■□□□□ 0.19
NSMCE1-204ENST00000563273 USP42Q9H9J4 1324 aaKnown RBP16.25■□□□□ 0.19
NSMCE1-204ENST00000563273 STARD3NLO95772 234 aa16.25■□□□□ 0.19
NSMCE1-204ENST00000563273 NEFMP07197 916 aa16.25■□□□□ 0.19
NSMCE1-204ENST00000563273 MMP10P09238 476 aa16.25■□□□□ 0.19
NSMCE1-204ENST00000563273 RTF1Q92541 710 aaKnown RBP16.25■□□□□ 0.19
NSMCE1-204ENST00000563273 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
NSMCE1-204ENST00000563273 HEG1Q9ULI3 1381 aa16.25■□□□□ 0.19
NSMCE1-204ENST00000563273 GPR162Q16538 588 aa16.24■□□□□ 0.19
NSMCE1-204ENST00000563273 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
NSMCE1-204ENST00000563273 FMNL2Q96PY5 1086 aa16.24■□□□□ 0.19
NSMCE1-204ENST00000563273 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
NSMCE1-204ENST00000563273 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
NSMCE1-204ENST00000563273 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
NSMCE1-204ENST00000563273 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
NSMCE1-204ENST00000563273 BTBD11A6QL63 1104 aa16.22■□□□□ 0.19
NSMCE1-204ENST00000563273 UTRNP46939 3433 aa16.22■□□□□ 0.19
NSMCE1-204ENST00000563273 ZBTB1Q9Y2K1 713 aa16.21■□□□□ 0.19
NSMCE1-204ENST00000563273 COL15A1P39059 1388 aa16.21■□□□□ 0.19
NSMCE1-204ENST00000563273 SIPA1L3O60292 1781 aaPredicted RBP16.21■□□□□ 0.18
NSMCE1-204ENST00000563273 C10orf71Q711Q0 1435 aa16.2■□□□□ 0.18
NSMCE1-204ENST00000563273 ZPR1O75312 459 aa16.2■□□□□ 0.18
NSMCE1-204ENST00000563273 EIF5P55010 431 aaKnown RBP16.2■□□□□ 0.18
NSMCE1-204ENST00000563273 TGFB2P61812 414 aa16.2■□□□□ 0.18
NSMCE1-204ENST00000563273 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms