RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ATP8B2P98198 1209 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 SLC4A10Q6U841 1118 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 SRCIN1Q9C0H9 1055 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 USP54Q70EL1 1684 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 FAM208AQ9UK61 1670 aaKnown RBP16.03■□□□□ 0.16
USB1-207ENST00000563149 FOXO3O43524 673 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 LRRCC1Q9C099 1032 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 MIS18AQ9NYP9 233 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
USB1-207ENST00000563149 XRN1Q8IZH2 1706 aaKnown RBP16.02■□□□□ 0.16
USB1-207ENST00000563149 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.16
USB1-207ENST00000563149 CEP170BQ9Y4F5 1589 aaPredicted RBP16.02■□□□□ 0.16
USB1-207ENST00000563149 TUBGCP6Q96RT7 1819 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 NUTM2FA1L443 756 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 GNAT3A8MTJ3 354 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 APBB1O00213 710 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 MCCP23508 829 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 ANAPC15P60006 121 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 FLIIQ13045 1269 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.15
USB1-207ENST00000563149 ANP32BQ92688 251 aaKnown RBP16.02■□□□□ 0.15
USB1-207ENST00000563149 LMBRD1Q9NUN5 540 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 AOX1Q06278 1338 aa16.02■□□□□ 0.15
USB1-207ENST00000563149 F6X3S4 739 aa16.01■□□□□ 0.15
USB1-207ENST00000563149 MCTP1Q6DN14 999 aa16.01■□□□□ 0.15
USB1-207ENST00000563149 IL17RAQ96F46 866 aa16.01■□□□□ 0.15
USB1-207ENST00000563149 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
USB1-207ENST00000563149 PIK3C2AO00443 1686 aa16.01■□□□□ 0.15
USB1-207ENST00000563149 ESYT1Q9BSJ8 1104 aa16■□□□□ 0.15
USB1-207ENST00000563149 MX1P20591 662 aa15.99■□□□□ 0.15
USB1-207ENST00000563149 NASPP49321 788 aaPredicted RBP15.99■□□□□ 0.15
USB1-207ENST00000563149 SOX12O15370 315 aa15.98■□□□□ 0.15
USB1-207ENST00000563149 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
USB1-207ENST00000563149 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
USB1-207ENST00000563149 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
USB1-207ENST00000563149 CHMP4AQ9BY43 222 aa15.98■□□□□ 0.15
USB1-207ENST00000563149 MAP3K5Q99683 1374 aa15.98■□□□□ 0.15
USB1-207ENST00000563149 CUL4AQ13619 759 aa15.98■□□□□ 0.15
USB1-207ENST00000563149 EXOC6BQ9Y2D4 811 aa15.98■□□□□ 0.15
USB1-207ENST00000563149 HOXC9P31274 260 aa15.97■□□□□ 0.15
USB1-207ENST00000563149 INTS4Q96HW7 963 aaKnown RBP15.97■□□□□ 0.15
USB1-207ENST00000563149 NWD1Q149M9 1564 aa15.97■□□□□ 0.15
USB1-207ENST00000563149 AK9Q5TCS8 1911 aa15.96■□□□□ 0.15
USB1-207ENST00000563149 RAB11FIP3O75154 756 aa15.96■□□□□ 0.15
USB1-207ENST00000563149 CHMLP26374 656 aa15.96■□□□□ 0.15
USB1-207ENST00000563149 ZGPATQ8N5A5 531 aaKnown RBP15.96■□□□□ 0.15
USB1-207ENST00000563149 RGPD8O14715 1765 aaPredicted RBP15.96■□□□□ 0.15
USB1-207ENST00000563149 NEK4P51957 841 aa15.95■□□□□ 0.14
USB1-207ENST00000563149 NLRP6P59044 892 aa15.95■□□□□ 0.14
USB1-207ENST00000563149 ZSCAN23Q3MJ62 389 aa15.95■□□□□ 0.14
USB1-207ENST00000563149 TMX3Q96JJ7 454 aa15.95■□□□□ 0.14
USB1-207ENST00000563149 ZDHHC9Q9Y397 364 aa15.95■□□□□ 0.14
USB1-207ENST00000563149 PNMA6EA0A0J9YXQ4 647 aa15.95■□□□□ 0.14
USB1-207ENST00000563149 HS1BP3Q53T59 392 aa15.95■□□□□ 0.14
USB1-207ENST00000563149 PKP1Q13835 747 aa15.94■□□□□ 0.14
USB1-207ENST00000563149 CAVIN1Q6NZI2 390 aaKnown RBP15.94■□□□□ 0.14
USB1-207ENST00000563149 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
USB1-207ENST00000563149 IL17REQ8NFR9 667 aa15.94■□□□□ 0.14
USB1-207ENST00000563149 SSH3Q8TE77 659 aa15.94■□□□□ 0.14
USB1-207ENST00000563149 MARF1Q9Y4F3 1742 aaKnown RBP15.94■□□□□ 0.14
USB1-207ENST00000563149 MBD3O95983 291 aa15.93■□□□□ 0.14
USB1-207ENST00000563149 UBTFL1P0CB47 393 aaPredicted RBP15.93■□□□□ 0.14
USB1-207ENST00000563149 NCLP19338 710 aaKnown RBP15.93■□□□□ 0.14
USB1-207ENST00000563149 THEMISQ8N1K5 641 aaPredicted RBP15.93■□□□□ 0.14
USB1-207ENST00000563149 NAP1L5Q96NT1 182 aaPredicted RBP15.93■□□□□ 0.14
USB1-207ENST00000563149 ERBB4Q15303 1308 aa15.93■□□□□ 0.14
USB1-207ENST00000563149 TRIM6-TRIM34B2RNG4 842 aa15.92■□□□□ 0.14
USB1-207ENST00000563149 PRPF40AO75400 957 aaKnown RBP15.92■□□□□ 0.14
USB1-207ENST00000563149 BRD1O95696 1058 aa15.92■□□□□ 0.14
USB1-207ENST00000563149 HOXB7P09629 217 aa15.92■□□□□ 0.14
USB1-207ENST00000563149 USP44Q9H0E7 712 aa15.92■□□□□ 0.14
USB1-207ENST00000563149 LRRFIP2Q9Y608 721 aaKnown RBP15.92■□□□□ 0.14
USB1-207ENST00000563149 RILPL2Q969X0 211 aa15.92■□□□□ 0.14
USB1-207ENST00000563149 POLA2Q14181 598 aa15.91■□□□□ 0.14
USB1-207ENST00000563149 ZSCAN30Q86W11 494 aa15.91■□□□□ 0.14
USB1-207ENST00000563149 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
USB1-207ENST00000563149 LRSAM1Q6UWE0 723 aa15.9■□□□□ 0.14
USB1-207ENST00000563149 GPT2Q8TD30 523 aa15.9■□□□□ 0.14
USB1-207ENST00000563149 ANO2Q9NQ90 1003 aa15.9■□□□□ 0.14
USB1-207ENST00000563149 CEMIPQ8WUJ3 1361 aa15.9■□□□□ 0.14
USB1-207ENST00000563149 MED1Q15648 1581 aaPredicted RBP15.89■□□□□ 0.13
USB1-207ENST00000563149 HSP90AB4PQ58FF6 505 aa15.89■□□□□ 0.13
USB1-207ENST00000563149 HSPA4P34932 840 aa15.88■□□□□ 0.13
USB1-207ENST00000563149 KIF1BPQ96EK5 621 aa15.88■□□□□ 0.13
USB1-207ENST00000563149 PDLIM2Q96JY6 352 aa15.88■□□□□ 0.13
USB1-207ENST00000563149 PLEKHG5O94827 1062 aa15.87■□□□□ 0.13
USB1-207ENST00000563149 CEBPAP49715 358 aaPredicted RBP15.87■□□□□ 0.13
USB1-207ENST00000563149 TSHZ3Q63HK5 1081 aa15.87■□□□□ 0.13
USB1-207ENST00000563149 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
USB1-207ENST00000563149 RBSNQ9H1K0 784 aa15.87■□□□□ 0.13
USB1-207ENST00000563149 PALD1Q9ULE6 856 aa15.87■□□□□ 0.13
USB1-207ENST00000563149 RHPN1Q8TCX5 695 aa15.87■□□□□ 0.13
USB1-207ENST00000563149 IP6K1Q92551 441 aa15.87■□□□□ 0.13
USB1-207ENST00000563149 NECTIN2Q92692 538 aa15.87■□□□□ 0.13
USB1-207ENST00000563149 SYAP1Q96A49 352 aaPredicted RBP15.87■□□□□ 0.13
USB1-207ENST00000563149 KDM3BQ7LBC6 1761 aa15.86■□□□□ 0.13
USB1-207ENST00000563149 MSNP26038 577 aaKnown RBP15.86■□□□□ 0.13
USB1-207ENST00000563149 PRIM1P49642 420 aaKnown RBP15.86■□□□□ 0.13
USB1-207ENST00000563149 PPP1R42Q7Z4L9 355 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms