RNA–Protein interactions for RNA: ENST00000562944.5

GGA2-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-203ENST00000562944 NFATC2IPQ8NCF5 419 aa31.39■■■□□ 2.62
GGA2-203ENST00000562944 ZEB1P37275 1124 aaPredicted RBP31.38■■■□□ 2.61
GGA2-203ENST00000562944 ATP6V1AP38606 617 aa31.37■■■□□ 2.61
GGA2-203ENST00000562944 ITPK1Q13572 414 aa31.37■■■□□ 2.61
GGA2-203ENST00000562944 COL23A1Q86Y22 540 aaPredicted RBP31.37■■■□□ 2.61
GGA2-203ENST00000562944 LINC00116Q8NCU8 138 aa31.37■■■□□ 2.61
GGA2-203ENST00000562944 LGR6Q9HBX8 967 aa31.37■■■□□ 2.61
GGA2-203ENST00000562944 RNMTO43148 476 aaKnown RBP31.36■■■□□ 2.61
GGA2-203ENST00000562944 RSPH6AQ9H0K4 717 aa31.35■■■□□ 2.61
GGA2-203ENST00000562944 AK7Q96M32 723 aa31.34■■■□□ 2.61
GGA2-203ENST00000562944 SLC4A9Q96Q91 983 aa31.34■■■□□ 2.61
GGA2-203ENST00000562944 SLC52A2Q9HAB3 445 aa31.34■■■□□ 2.61
GGA2-203ENST00000562944 ADAMTS7Q9UKP4 1686 aa31.33■■■□□ 2.61
GGA2-203ENST00000562944 U2AF1L5P0DN76 240 aaPredicted RBP31.33■■■□□ 2.61
GGA2-203ENST00000562944 PRKAR2BP31323 418 aa31.33■■■□□ 2.61
GGA2-203ENST00000562944 U2AF1Q01081 240 aaKnown RBP eCLIP31.33■■■□□ 2.614e-8■□□□□ 11.1
GGA2-203ENST00000562944 FLAD1Q8NFF5 587 aa31.33■■■□□ 2.61
GGA2-203ENST00000562944 GAS2L2Q8NHY3 880 aa31.33■■■□□ 2.61
GGA2-203ENST00000562944 RBM42Q9BTD8 480 aaKnown RBP31.33■■■□□ 2.61
GGA2-203ENST00000562944 MRC1P22897 1456 aa31.33■■■□□ 2.61
GGA2-203ENST00000562944 ZNF831Q5JPB2 1677 aa31.32■■■□□ 2.6
GGA2-203ENST00000562944 COL24A1Q17RW2 1714 aa31.32■■■□□ 2.6
GGA2-203ENST00000562944 VIRMAQ69YN4 1812 aaKnown RBP31.31■■■□□ 2.6
GGA2-203ENST00000562944 UBR3Q6ZT12 1888 aa31.3■■■□□ 2.6
GGA2-203ENST00000562944 MSH5O43196 834 aa31.3■■■□□ 2.6
GGA2-203ENST00000562944 AMIGO3Q86WK7 504 aa31.3■■■□□ 2.6
GGA2-203ENST00000562944 PHACTR3Q96KR7 559 aa31.3■■■□□ 2.6
GGA2-203ENST00000562944 FCHSD2O94868 740 aa31.29■■■□□ 2.6
GGA2-203ENST00000562944 RALBP1Q15311 655 aa31.29■■■□□ 2.6
GGA2-203ENST00000562944 MAP3K5Q99683 1374 aa31.29■■■□□ 2.6
GGA2-203ENST00000562944 ARXQ96QS3 562 aa31.28■■■□□ 2.6
GGA2-203ENST00000562944 GNAT3A8MTJ3 354 aa31.27■■■□□ 2.6
GGA2-203ENST00000562944 PTCD1O75127 700 aaKnown RBP31.27■■■□□ 2.6
GGA2-203ENST00000562944 SSFA2P28290 1259 aa31.26■■■□□ 2.59
GGA2-203ENST00000562944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.25■■■□□ 2.59
GGA2-203ENST00000562944 POLD1P28340 1107 aa31.25■■■□□ 2.59
GGA2-203ENST00000562944 GNPATO15228 680 aa31.24■■■□□ 2.59
GGA2-203ENST00000562944 SMIM5Q71RC9 77 aa31.24■■■□□ 2.59
GGA2-203ENST00000562944 IL17REQ8NFR9 667 aa31.24■■■□□ 2.59
GGA2-203ENST00000562944 FHDC1Q9C0D6 1143 aaPredicted RBP31.24■■■□□ 2.59
GGA2-203ENST00000562944 PHF14O94880 888 aa31.23■■■□□ 2.59
GGA2-203ENST00000562944 RC3H1Q5TC82 1133 aaKnown RBP31.23■■■□□ 2.59
GGA2-203ENST00000562944 COL5A3P25940 1745 aaPredicted RBP31.23■■■□□ 2.59
GGA2-203ENST00000562944 SYT17Q9BSW7 474 aa31.22■■■□□ 2.59
GGA2-203ENST00000562944 CNTNAP4Q9C0A0 1308 aa31.22■■■□□ 2.59
GGA2-203ENST00000562944 SLC39A6Q13433 755 aa31.2■■■□□ 2.59
GGA2-203ENST00000562944 MSL1Q68DK7 614 aa31.2■■■□□ 2.59
GGA2-203ENST00000562944 CICQ96RK0 1608 aaPredicted RBP31.19■■■□□ 2.58
GGA2-203ENST00000562944 CEMIPQ8WUJ3 1361 aa31.17■■■□□ 2.58
GGA2-203ENST00000562944 MYH14Q7Z406 1995 aaKnown RBP31.17■■■□□ 2.58
GGA2-203ENST00000562944 TEFQ10587 303 aa31.17■■■□□ 2.58
GGA2-203ENST00000562944 RTCBQ9Y3I0 505 aaKnown RBP31.17■■■□□ 2.58
GGA2-203ENST00000562944 TJP1Q07157 1748 aa31.17■■■□□ 2.58
GGA2-203ENST00000562944 KCPQ6ZWJ8 1503 aa31.16■■■□□ 2.58
GGA2-203ENST00000562944 MYBBP1AQ9BQG0 1328 aaKnown RBP31.16■■■□□ 2.58
GGA2-203ENST00000562944 RPS6KA4O75676 772 aa31.15■■■□□ 2.58
GGA2-203ENST00000562944 SIPA1L3O60292 1781 aaPredicted RBP31.14■■■□□ 2.58
GGA2-203ENST00000562944 ADRA2BP18089 450 aa31.13■■■□□ 2.57
GGA2-203ENST00000562944 CRKLP46109 303 aaKnown RBP31.13■■■□□ 2.57
GGA2-203ENST00000562944 TRAPPC3LQ5T215 181 aa31.13■■■□□ 2.57
GGA2-203ENST00000562944 DNAJC10Q8IXB1 793 aa31.12■■■□□ 2.57
GGA2-203ENST00000562944 UBR2Q8IWV8 1755 aa31.12■■■□□ 2.57
GGA2-203ENST00000562944 VSIG10Q8N0Z9 540 aa31.11■■■□□ 2.57
GGA2-203ENST00000562944 PLEKHF1Q96S99 279 aa31.11■■■□□ 2.57
GGA2-203ENST00000562944 TTC5Q8N0Z6 440 aa31.1■■■□□ 2.57
GGA2-203ENST00000562944 RTF1Q92541 710 aaKnown RBP31.1■■■□□ 2.57
GGA2-203ENST00000562944 ARHGEF1Q92888 912 aaKnown RBP31.1■■■□□ 2.57
GGA2-203ENST00000562944 HTATSF1O43719 755 aaKnown RBP31.09■■■□□ 2.57
GGA2-203ENST00000562944 NEFMP07197 916 aa31.09■■■□□ 2.57
GGA2-203ENST00000562944 ZNF790Q6PG37 636 aa31.09■■■□□ 2.57
GGA2-203ENST00000562944 INTS5Q6P9B9 1019 aaKnown RBP31.08■■■□□ 2.57
GGA2-203ENST00000562944 KLHL34Q8N239 644 aa31.08■■■□□ 2.57
GGA2-203ENST00000562944 DCAF8L1A6NGE4 600 aa31.07■■■□□ 2.56
GGA2-203ENST00000562944 CYP19A1P11511 503 aaPredicted RBP31.07■■■□□ 2.56
GGA2-203ENST00000562944 MCM10Q7L590 875 aa31.07■■■□□ 2.56
GGA2-203ENST00000562944 PNNQ9H307 717 aaKnown RBP31.07■■■□□ 2.56
GGA2-203ENST00000562944 PRKRIP1Q9H875 184 aaPredicted RBP31.07■■■□□ 2.56
GGA2-203ENST00000562944 ZNF496Q96IT1 587 aaPredicted RBP31.05■■■□□ 2.56
GGA2-203ENST00000562944 CCDC87Q9NVE4 849 aa31.05■■■□□ 2.56
GGA2-203ENST00000562944 BTBD11A6QL63 1104 aa31.04■■■□□ 2.56
GGA2-203ENST00000562944 RFC4P35249 363 aa31.04■■■□□ 2.56
GGA2-203ENST00000562944 DCTN1Q14203 1278 aa31.04■■■□□ 2.56
GGA2-203ENST00000562944 NFE2L2Q16236 605 aa31.02■■■□□ 2.56
GGA2-203ENST00000562944 HEG1Q9ULI3 1381 aa31.02■■■□□ 2.56
GGA2-203ENST00000562944 C4AP0C0L4 1744 aa31.01■■■□□ 2.56
GGA2-203ENST00000562944 DLG5Q8TDM6 1919 aa31.01■■■□□ 2.55
GGA2-203ENST00000562944 NLGN2Q8NFZ4 835 aa31.01■■■□□ 2.55
GGA2-203ENST00000562944 MAPK8IP3Q9UPT6 1336 aa31■■■□□ 2.55
GGA2-203ENST00000562944 KCNQ3O43525 872 aa31■■■□□ 2.55
GGA2-203ENST00000562944 GYS1P13807 737 aa31■■■□□ 2.55
GGA2-203ENST00000562944 NLGN1Q8N2Q7 840 aa31■■■□□ 2.55
GGA2-203ENST00000562944 FMNL2Q96PY5 1086 aa31■■■□□ 2.55
GGA2-203ENST00000562944 SOS1Q07889 1333 aaPredicted RBP30.99■■■□□ 2.55
GGA2-203ENST00000562944 CD2APQ9Y5K6 639 aa30.99■■■□□ 2.55
GGA2-203ENST00000562944 ZBTB1Q9Y2K1 713 aa30.98■■■□□ 2.55
GGA2-203ENST00000562944 ZNF316A6NFI3 1004 aaPredicted RBP30.97■■■□□ 2.55
GGA2-203ENST00000562944 STARD3NLO95772 234 aa30.97■■■□□ 2.55
GGA2-203ENST00000562944 MMP10P09238 476 aa30.97■■■□□ 2.55
GGA2-203ENST00000562944 TEX13AQ9BXU3 409 aaPredicted RBP30.97■■■□□ 2.55
GGA2-203ENST00000562944 SRP68Q9UHB9 627 aaKnown RBP30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms