RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 HRH3Q9Y5N1 445 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 ACIN1Q9UKV3 1341 aaKnown RBP5.8□□□□□ -1.48
CHD9-207ENST00000562806 CDK2AP1O14519 115 aa5.8□□□□□ -1.48
CHD9-207ENST00000562806 ZBTB7BO15156 539 aaPredicted RBP5.8□□□□□ -1.48
CHD9-207ENST00000562806 SNRPBP14678 240 aaKnown RBP5.8□□□□□ -1.48
CHD9-207ENST00000562806 CLDN10P78369 228 aa5.8□□□□□ -1.48
CHD9-207ENST00000562806 FOXD4L5Q5VV16 416 aaPredicted RBP5.8□□□□□ -1.48
CHD9-207ENST00000562806 TMEM214Q6NUQ4 689 aaKnown RBP5.8□□□□□ -1.48
CHD9-207ENST00000562806 TAS1R3Q7RTX0 852 aa5.8□□□□□ -1.48
CHD9-207ENST00000562806 PPARGC1BQ86YN6 1023 aaKnown RBP5.8□□□□□ -1.48
CHD9-207ENST00000562806 CCDC82Q8N4S0 544 aa5.8□□□□□ -1.48
CHD9-207ENST00000562806 TPCN2Q8NHX9 752 aa5.8□□□□□ -1.48
CHD9-207ENST00000562806 GAS2L2Q8NHY3 880 aa5.8□□□□□ -1.48
CHD9-207ENST00000562806 RAB6BQ9NRW1 208 aa5.8□□□□□ -1.48
CHD9-207ENST00000562806 DNMT3LQ9UJW3 386 aa5.8□□□□□ -1.48
CHD9-207ENST00000562806 A6NJY4 79 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 FIGNL2A6NMB9 653 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 TMEM229AB2RXF0 380 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L15C9J2P7 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L10C9JJH3 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L13C9JLJ4 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L12C9JPN9 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L11C9JVI0 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L21D6R901 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L18D6R9N7 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L22D6RA61 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L17D6RBQ6 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L19D6RCP7 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L20D6RJB6 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 ATG7O95352 703 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 USP17L24Q0WX57 530 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 PTK7Q13308 1070 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 MTFR1Q15390 333 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 ANKMY2Q8IV38 441 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 RHBDD1Q8TEB9 315 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 SLC16A10Q8TF71 515 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 GMCL1Q96IK5 515 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 NIFKQ9BYG3 293 aaKnown RBP5.79□□□□□ -1.48
CHD9-207ENST00000562806 FHDC1Q9C0D6 1143 aaPredicted RBP5.79□□□□□ -1.48
CHD9-207ENST00000562806 CHMP3Q9Y3E7 222 aa5.79□□□□□ -1.48
CHD9-207ENST00000562806 POTECB2RU33 542 aa5.78□□□□□ -1.48
CHD9-207ENST00000562806 PDE4CQ08493 712 aa5.78□□□□□ -1.48
CHD9-207ENST00000562806 C1orf216Q8TAB5 229 aa5.78□□□□□ -1.48
CHD9-207ENST00000562806 FAM200AQ8TCP9 573 aa5.78□□□□□ -1.48
CHD9-207ENST00000562806 ZNF358Q9NW07 568 aa5.78□□□□□ -1.48
CHD9-207ENST00000562806 NXF1Q9UBU9 619 aaKnown RBP5.78□□□□□ -1.48
CHD9-207ENST00000562806 H7C1W4 665 aa5.77□□□□□ -1.49
CHD9-207ENST00000562806 NBPF10Q6P3W6 841 aaKnown RBP5.77□□□□□ -1.49
CHD9-207ENST00000562806 PRICKLE2Q7Z3G6 844 aa5.77□□□□□ -1.49
CHD9-207ENST00000562806 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.77□□□□□ -1.49
CHD9-207ENST00000562806 ZNF594Q96JF6 807 aaPredicted RBP5.77□□□□□ -1.49
CHD9-207ENST00000562806 TIMMDC1Q9NPL8 285 aa5.77□□□□□ -1.49
CHD9-207ENST00000562806 DYRK1BQ9Y463 629 aa5.77□□□□□ -1.49
CHD9-207ENST00000562806 A0A1B0GTH6 734 aa5.76□□□□□ -1.49
CHD9-207ENST00000562806 SLC35F4A4IF30 521 aa5.76□□□□□ -1.49
CHD9-207ENST00000562806 SUPT5HO00267 1087 aaKnown RBP5.76□□□□□ -1.49
CHD9-207ENST00000562806 SRPK2P78362 688 aaKnown RBP5.76□□□□□ -1.49
CHD9-207ENST00000562806 PTSQ03393 145 aa5.76□□□□□ -1.49
CHD9-207ENST00000562806 DPYDQ12882 1025 aa5.76□□□□□ -1.49
CHD9-207ENST00000562806 LBRQ14739 615 aaKnown RBP5.76□□□□□ -1.49
CHD9-207ENST00000562806 SWI5Q1ZZU3 235 aa5.76□□□□□ -1.49
CHD9-207ENST00000562806 CRTC2Q53ET0 693 aaPredicted RBP5.76□□□□□ -1.49
CHD9-207ENST00000562806 SCHIP1Q9P0W5 487 aaPredicted RBP5.76□□□□□ -1.49
CHD9-207ENST00000562806 SERTAD1Q9UHV2 236 aa5.76□□□□□ -1.49
CHD9-207ENST00000562806 NOVA2Q9UNW9 492 aaKnown RBP5.76□□□□□ -1.49
CHD9-207ENST00000562806 KIAA1024Q9UPX6 916 aa5.76□□□□□ -1.49
CHD9-207ENST00000562806 DKK1O94907 266 aa5.75□□□□□ -1.49
CHD9-207ENST00000562806 POU4F2Q12837 409 aa5.75□□□□□ -1.49
CHD9-207ENST00000562806 NBPF1Q3BBV0 1214 aa5.75□□□□□ -1.49
CHD9-207ENST00000562806 STAG2Q8N3U4 1231 aa5.75□□□□□ -1.49
CHD9-207ENST00000562806 CCDC155Q8N6L0 562 aa5.75□□□□□ -1.49
CHD9-207ENST00000562806 C1orf115Q9H7X2 142 aa5.75□□□□□ -1.49
CHD9-207ENST00000562806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.75□□□□□ -1.49
CHD9-207ENST00000562806 GPC6Q9Y625 555 aaPredicted RBP5.75□□□□□ -1.49
CHD9-207ENST00000562806 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.74□□□□□ -1.49
CHD9-207ENST00000562806 TERTO14746 1132 aaKnown RBP5.74□□□□□ -1.49
CHD9-207ENST00000562806 F11P03951 625 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 CSB-PGBD3P0DP91 1061 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 TATP17735 454 aaPredicted RBP5.74□□□□□ -1.49
CHD9-207ENST00000562806 EPHA4P54764 986 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 PSMA6P60900 246 aaKnown RBP5.74□□□□□ -1.49
CHD9-207ENST00000562806 FOXK2Q01167 660 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 TEAD4Q15561 434 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 FOXR1Q6PIV2 292 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 PGBD3Q8N328 593 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 HINFPQ9BQA5 517 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 ZDHHC3Q9NYG2 299 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 CABP1Q9NZU7 370 aa5.74□□□□□ -1.49
CHD9-207ENST00000562806 IQSEC3Q9UPP2 1182 aaPredicted RBP5.74□□□□□ -1.49
CHD9-207ENST00000562806 SOBPA7XYQ1 873 aa5.73□□□□□ -1.49
CHD9-207ENST00000562806 SFI1A8K8P3 1242 aa5.73□□□□□ -1.49
CHD9-207ENST00000562806 PPFIA3O75145 1194 aa5.73□□□□□ -1.49
CHD9-207ENST00000562806 C4orf17Q53FE4 359 aa5.73□□□□□ -1.49
CHD9-207ENST00000562806 SLC9A9Q8IVB4 645 aa5.73□□□□□ -1.49
CHD9-207ENST00000562806 IRF7Q92985 503 aa5.73□□□□□ -1.49
CHD9-207ENST00000562806 ARXQ96QS3 562 aa5.73□□□□□ -1.49
CHD9-207ENST00000562806 SERTM1A2A2V5 107 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 H3BM21 787 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 RHOQP17081 205 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 IGFBP4P22692 258 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms