RNA–Protein interactions for RNA: ENST00000562117.1

GGA2-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-202ENST00000562117 MBIPQ9NS73 344 aa17.08■□□□□ 0.32
GGA2-202ENST00000562117 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
GGA2-202ENST00000562117 WNK3Q9BYP7 1800 aa17.07■□□□□ 0.32
GGA2-202ENST00000562117 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
GGA2-202ENST00000562117 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
GGA2-202ENST00000562117 LRRC37A3O60309 1634 aa17.06■□□□□ 0.32
GGA2-202ENST00000562117 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
GGA2-202ENST00000562117 ADAMTS7Q9UKP4 1686 aa17.05■□□□□ 0.32
GGA2-202ENST00000562117 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
GGA2-202ENST00000562117 ZNF790Q6PG37 636 aa17.05■□□□□ 0.32
GGA2-202ENST00000562117 PIGBQ92521 554 aa17.05■□□□□ 0.32
GGA2-202ENST00000562117 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
GGA2-202ENST00000562117 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
GGA2-202ENST00000562117 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
GGA2-202ENST00000562117 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
GGA2-202ENST00000562117 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
GGA2-202ENST00000562117 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
GGA2-202ENST00000562117 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.32
GGA2-202ENST00000562117 MRC1P22897 1456 aa17.02■□□□□ 0.32
GGA2-202ENST00000562117 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
GGA2-202ENST00000562117 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
GGA2-202ENST00000562117 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
GGA2-202ENST00000562117 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
GGA2-202ENST00000562117 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
GGA2-202ENST00000562117 HOXB7P09629 217 aa17■□□□□ 0.31
GGA2-202ENST00000562117 SLC39A6Q13433 755 aa17■□□□□ 0.31
GGA2-202ENST00000562117 FAM182BQ5T319 152 aa17■□□□□ 0.31
GGA2-202ENST00000562117 BCL11BQ9C0K0 894 aaPredicted RBP17■□□□□ 0.31
GGA2-202ENST00000562117 RGS12O14924 1447 aa16.99■□□□□ 0.31
GGA2-202ENST00000562117 KCNQ2O43526 872 aa16.99■□□□□ 0.31
GGA2-202ENST00000562117 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
GGA2-202ENST00000562117 ATG3Q9NT62 314 aa16.99■□□□□ 0.31
GGA2-202ENST00000562117 KCNQ3O43525 872 aa16.98■□□□□ 0.31
GGA2-202ENST00000562117 VAMP4O75379 141 aa16.98■□□□□ 0.31
GGA2-202ENST00000562117 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
GGA2-202ENST00000562117 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
GGA2-202ENST00000562117 ASAP1Q9ULH1 1129 aa16.98■□□□□ 0.31
GGA2-202ENST00000562117 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
GGA2-202ENST00000562117 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
GGA2-202ENST00000562117 ZNF496Q96IT1 587 aaPredicted RBP16.97■□□□□ 0.31
GGA2-202ENST00000562117 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
GGA2-202ENST00000562117 HEG1Q9ULI3 1381 aa16.97■□□□□ 0.31
GGA2-202ENST00000562117 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
GGA2-202ENST00000562117 GIGYF1O75420 1035 aaPredicted RBP16.96■□□□□ 0.31
GGA2-202ENST00000562117 RCAN3Q9UKA8 241 aa16.96■□□□□ 0.31
GGA2-202ENST00000562117 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
GGA2-202ENST00000562117 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
GGA2-202ENST00000562117 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
GGA2-202ENST00000562117 ALDH1L2Q3SY69 923 aa16.94■□□□□ 0.3
GGA2-202ENST00000562117 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
GGA2-202ENST00000562117 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
GGA2-202ENST00000562117 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
GGA2-202ENST00000562117 TRIM37O94972 964 aa16.93■□□□□ 0.3
GGA2-202ENST00000562117 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
GGA2-202ENST00000562117 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
GGA2-202ENST00000562117 RARSP54136 660 aaKnown RBP16.92■□□□□ 0.3
GGA2-202ENST00000562117 TOGARAM1Q9Y4F4 1720 aa16.92■□□□□ 0.3
GGA2-202ENST00000562117 VIRMAQ69YN4 1812 aaKnown RBP16.91■□□□□ 0.3
GGA2-202ENST00000562117 BRWD3Q6RI45 1802 aa16.91■□□□□ 0.3
GGA2-202ENST00000562117 ITGB4P16144 1822 aa16.91■□□□□ 0.3
GGA2-202ENST00000562117 PALLDQ8WX93 1383 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 PLSCR1O15162 318 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 STARD3NLO95772 234 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
GGA2-202ENST00000562117 SIK1P57059 783 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 HDGFL1Q5TGJ6 251 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 PTF1AQ7RTS3 328 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
GGA2-202ENST00000562117 EIF2S2P20042 333 aaKnown RBP16.89■□□□□ 0.29
GGA2-202ENST00000562117 USP16Q9Y5T5 823 aa16.89■□□□□ 0.29
GGA2-202ENST00000562117 KDM3BQ7LBC6 1761 aa16.89■□□□□ 0.29
GGA2-202ENST00000562117 ATP6V1AP38606 617 aa16.88■□□□□ 0.29
GGA2-202ENST00000562117 CCDC125Q86Z20 511 aa16.88■□□□□ 0.29
GGA2-202ENST00000562117 SSH1Q8WYL5 1049 aa16.88■□□□□ 0.29
GGA2-202ENST00000562117 DBF4Q9UBU7 674 aaPredicted RBP16.88■□□□□ 0.29
GGA2-202ENST00000562117 ERBB4Q15303 1308 aa16.88■□□□□ 0.29
GGA2-202ENST00000562117 APBA3O96018 575 aa16.87■□□□□ 0.29
GGA2-202ENST00000562117 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
GGA2-202ENST00000562117 SLC27A3Q5K4L6 730 aa16.87■□□□□ 0.29
GGA2-202ENST00000562117 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
GGA2-202ENST00000562117 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
GGA2-202ENST00000562117 NHSQ6T4R5 1651 aa16.87■□□□□ 0.29
GGA2-202ENST00000562117 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
GGA2-202ENST00000562117 IPO8O15397 1037 aaKnown RBP16.86■□□□□ 0.29
GGA2-202ENST00000562117 DNAJC10Q8IXB1 793 aa16.86■□□□□ 0.29
GGA2-202ENST00000562117 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
GGA2-202ENST00000562117 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
GGA2-202ENST00000562117 DDX21Q9NR30 783 aaKnown RBP eCLIP16.86■□□□□ 0.29
GGA2-202ENST00000562117 HYPKQ9NX55 129 aa16.86■□□□□ 0.29
GGA2-202ENST00000562117 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
GGA2-202ENST00000562117 BCAR3O75815 825 aa16.85■□□□□ 0.29
GGA2-202ENST00000562117 SF3B2Q13435 895 aaKnown RBP16.85■□□□□ 0.29
GGA2-202ENST00000562117 CYP19A1P11511 503 aaPredicted RBP16.84■□□□□ 0.29
GGA2-202ENST00000562117 ARHGAP45Q92619 1136 aa16.84■□□□□ 0.29
GGA2-202ENST00000562117 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
GGA2-202ENST00000562117 CCNL1Q9UK58 526 aaPredicted RBP16.84■□□□□ 0.29
GGA2-202ENST00000562117 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
GGA2-202ENST00000562117 KIF16BQ96L93 1317 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1803.7 ms