RNA–Protein interactions for RNA: ENST00000562048.5

CDH5-203, Transcript of cadherin 5, humanhuman

TSL 3

Gene CDH5, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-203ENST00000562048 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
CDH5-203ENST00000562048 THUMPD2Q9BTF0 503 aaKnown RBP17.25■□□□□ 0.35
CDH5-203ENST00000562048 MBIPQ9NS73 344 aa17.24■□□□□ 0.35
CDH5-203ENST00000562048 CABP4P57796 275 aa17.23■□□□□ 0.35
CDH5-203ENST00000562048 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
CDH5-203ENST00000562048 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
CDH5-203ENST00000562048 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
CDH5-203ENST00000562048 RXRBP28702 533 aa17.22■□□□□ 0.35
CDH5-203ENST00000562048 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
CDH5-203ENST00000562048 HOXB7P09629 217 aa17.21■□□□□ 0.35
CDH5-203ENST00000562048 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
CDH5-203ENST00000562048 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
CDH5-203ENST00000562048 DOT1LQ8TEK3 1739 aa17.21■□□□□ 0.35
CDH5-203ENST00000562048 BRWD3Q6RI45 1802 aa17.2■□□□□ 0.34
CDH5-203ENST00000562048 A0A0G2JS52 829 aa17.2■□□□□ 0.34
CDH5-203ENST00000562048 MYT1Q01538 1121 aa17.2■□□□□ 0.34
CDH5-203ENST00000562048 ILDR1Q86SU0 546 aaPredicted RBP17.2■□□□□ 0.34
CDH5-203ENST00000562048 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
CDH5-203ENST00000562048 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
CDH5-203ENST00000562048 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
CDH5-203ENST00000562048 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
CDH5-203ENST00000562048 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
CDH5-203ENST00000562048 EXOSC9Q06265 439 aaKnown RBP17.18■□□□□ 0.34
CDH5-203ENST00000562048 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
CDH5-203ENST00000562048 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
CDH5-203ENST00000562048 RGS17Q9UGC6 210 aaPredicted RBP17.18■□□□□ 0.34
CDH5-203ENST00000562048 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
CDH5-203ENST00000562048 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
CDH5-203ENST00000562048 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
CDH5-203ENST00000562048 EIF4A1P60842 406 aaKnown RBP17.16■□□□□ 0.34
CDH5-203ENST00000562048 ALDH1L2Q3SY69 923 aa17.16■□□□□ 0.34
CDH5-203ENST00000562048 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
CDH5-203ENST00000562048 BRPF1P55201 1214 aaPredicted RBP17.15■□□□□ 0.34
CDH5-203ENST00000562048 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
CDH5-203ENST00000562048 FAM196AQ6ZSG2 479 aa17.15■□□□□ 0.34
CDH5-203ENST00000562048 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
CDH5-203ENST00000562048 ZNF831Q5JPB2 1677 aa17.14■□□□□ 0.33
CDH5-203ENST00000562048 VAMP4O75379 141 aa17.14■□□□□ 0.33
CDH5-203ENST00000562048 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
CDH5-203ENST00000562048 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
CDH5-203ENST00000562048 PIGBQ92521 554 aa17.13■□□□□ 0.33
CDH5-203ENST00000562048 SMARCC1Q92922 1105 aaPredicted RBP17.13■□□□□ 0.33
CDH5-203ENST00000562048 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
CDH5-203ENST00000562048 CICQ96RK0 1608 aaPredicted RBP17.12■□□□□ 0.33
CDH5-203ENST00000562048 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
CDH5-203ENST00000562048 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
CDH5-203ENST00000562048 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
CDH5-203ENST00000562048 C8orf58Q8NAV2 365 aa17.12■□□□□ 0.33
CDH5-203ENST00000562048 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
CDH5-203ENST00000562048 LAMB4A4D0S4 1761 aa17.11■□□□□ 0.33
CDH5-203ENST00000562048 RARSP54136 660 aaKnown RBP17.11■□□□□ 0.33
CDH5-203ENST00000562048 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
CDH5-203ENST00000562048 RNF123Q5XPI4 1314 aa17.11■□□□□ 0.33
CDH5-203ENST00000562048 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
CDH5-203ENST00000562048 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
CDH5-203ENST00000562048 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
CDH5-203ENST00000562048 CCDC30Q5VVM6 783 aa17.1■□□□□ 0.33
CDH5-203ENST00000562048 RGS12O14924 1447 aa17.1■□□□□ 0.33
CDH5-203ENST00000562048 BTAF1O14981 1849 aa17.1■□□□□ 0.33
CDH5-203ENST00000562048 TSPYL6Q8N831 410 aa17.09■□□□□ 0.33
CDH5-203ENST00000562048 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
CDH5-203ENST00000562048 ERBB4Q15303 1308 aa17.08■□□□□ 0.32
CDH5-203ENST00000562048 KIF16BQ96L93 1317 aa17.08■□□□□ 0.32
CDH5-203ENST00000562048 KCNQ3O43525 872 aa17.08■□□□□ 0.32
CDH5-203ENST00000562048 SLC39A6Q13433 755 aa17.08■□□□□ 0.32
CDH5-203ENST00000562048 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.32
CDH5-203ENST00000562048 ZNF496Q96IT1 587 aaPredicted RBP17.08■□□□□ 0.32
CDH5-203ENST00000562048 BCL11BQ9C0K0 894 aaPredicted RBP17.08■□□□□ 0.32
CDH5-203ENST00000562048 MS4A1P11836 297 aa17.06■□□□□ 0.32
CDH5-203ENST00000562048 ACSBG1Q96GR2 724 aa17.06■□□□□ 0.32
CDH5-203ENST00000562048 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
CDH5-203ENST00000562048 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
CDH5-203ENST00000562048 LY75O60449 1722 aa17.05■□□□□ 0.32
CDH5-203ENST00000562048 C5P01031 1676 aa17.05■□□□□ 0.32
CDH5-203ENST00000562048 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
CDH5-203ENST00000562048 IPO8O15397 1037 aaKnown RBP17.05■□□□□ 0.32
CDH5-203ENST00000562048 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
CDH5-203ENST00000562048 SSH1Q8WYL5 1049 aa17.05■□□□□ 0.32
CDH5-203ENST00000562048 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
CDH5-203ENST00000562048 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
CDH5-203ENST00000562048 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
CDH5-203ENST00000562048 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
CDH5-203ENST00000562048 SUPT16HQ9Y5B9 1047 aaKnown RBP17.04■□□□□ 0.32
CDH5-203ENST00000562048 PALLDQ8WX93 1383 aa17.03■□□□□ 0.32
CDH5-203ENST00000562048 KCNQ2O43526 872 aa17.03■□□□□ 0.32
CDH5-203ENST00000562048 RRP1P56182 461 aaKnown RBP17.03■□□□□ 0.32
CDH5-203ENST00000562048 RGPD3A6NKT7 1758 aaPredicted RBP17.02■□□□□ 0.32
CDH5-203ENST00000562048 RGPD4Q7Z3J3 1758 aa17.02■□□□□ 0.32
CDH5-203ENST00000562048 PTPRCP08575 1304 aa17.02■□□□□ 0.32
CDH5-203ENST00000562048 STARD3NLO95772 234 aa17.02■□□□□ 0.32
CDH5-203ENST00000562048 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
CDH5-203ENST00000562048 LOC102724428A0A0B4J2F2 783 aa17.01■□□□□ 0.31
CDH5-203ENST00000562048 PTCD1O75127 700 aaKnown RBP17.01■□□□□ 0.31
CDH5-203ENST00000562048 BCAR3O75815 825 aa17.01■□□□□ 0.31
CDH5-203ENST00000562048 SIK1P57059 783 aa17.01■□□□□ 0.31
CDH5-203ENST00000562048 PDE3AQ14432 1141 aa17.01■□□□□ 0.31
CDH5-203ENST00000562048 DDX21Q9NR30 783 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDH5-203ENST00000562048 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
CDH5-203ENST00000562048 TJP1Q07157 1748 aa17.01■□□□□ 0.31
CDH5-203ENST00000562048 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms