RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 PDE4AP27815 886 aa14.87□□□□□ -0.03
PCAT1-202ENST00000561978 CALD1Q05682 793 aaKnown RBP14.87□□□□□ -0.03
PCAT1-202ENST00000561978 EIF4A2Q14240 407 aaKnown RBP14.87□□□□□ -0.03
PCAT1-202ENST00000561978 CDK12Q9NYV4 1490 aaPredicted RBP14.87□□□□□ -0.03
PCAT1-202ENST00000561978 BARGINQ6ZT62 677 aa14.86□□□□□ -0.03
PCAT1-202ENST00000561978 FRAT1Q92837 279 aaPredicted RBP14.86□□□□□ -0.03
PCAT1-202ENST00000561978 RSPH6AQ9H0K4 717 aa14.86□□□□□ -0.03
PCAT1-202ENST00000561978 THRAP3Q9Y2W1 955 aaKnown RBP14.86□□□□□ -0.03
PCAT1-202ENST00000561978 BACH2Q9BYV9 841 aa14.85□□□□□ -0.03
PCAT1-202ENST00000561978 FAM208AQ9UK61 1670 aaKnown RBP14.85□□□□□ -0.03
PCAT1-202ENST00000561978 IL13P35225 146 aa14.85□□□□□ -0.03
PCAT1-202ENST00000561978 FAM182BQ5T319 152 aa14.85□□□□□ -0.03
PCAT1-202ENST00000561978 CLUAP1Q96AJ1 413 aa14.85□□□□□ -0.03
PCAT1-202ENST00000561978 PRKAR2BP31323 418 aa14.84□□□□□ -0.03
PCAT1-202ENST00000561978 EYA1Q99502 592 aa14.84□□□□□ -0.03
PCAT1-202ENST00000561978 THSD7AQ9UPZ6 1657 aa14.84□□□□□ -0.03
PCAT1-202ENST00000561978 WNK3Q9BYP7 1800 aa14.83□□□□□ -0.04
PCAT1-202ENST00000561978 NFE2L2Q16236 605 aa14.83□□□□□ -0.04
PCAT1-202ENST00000561978 ZKSCAN2Q63HK3 967 aa14.83□□□□□ -0.04
PCAT1-202ENST00000561978 PANK1Q8TE04 598 aa14.83□□□□□ -0.04
PCAT1-202ENST00000561978 ZNF428Q96B54 188 aa14.83□□□□□ -0.04
PCAT1-202ENST00000561978 COG6Q9Y2V7 657 aa14.83□□□□□ -0.04
PCAT1-202ENST00000561978 IL2RBP14784 551 aa14.82□□□□□ -0.04
PCAT1-202ENST00000561978 LMOD3Q0VAK6 560 aa14.82□□□□□ -0.04
PCAT1-202ENST00000561978 HOMEZQ8IX15 550 aa14.82□□□□□ -0.04
PCAT1-202ENST00000561978 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
PCAT1-202ENST00000561978 EXOSC9Q06265 439 aaKnown RBP14.82□□□□□ -0.04
PCAT1-202ENST00000561978 KRT27Q7Z3Y8 459 aa14.82□□□□□ -0.04
PCAT1-202ENST00000561978 DISP2A7MBM2 1401 aa14.81□□□□□ -0.04
PCAT1-202ENST00000561978 DDB1Q16531 1140 aa14.81□□□□□ -0.04
PCAT1-202ENST00000561978 TSR2Q969E8 191 aaKnown RBP14.81□□□□□ -0.04
PCAT1-202ENST00000561978 IPO9Q96P70 1041 aaKnown RBP14.81□□□□□ -0.04
PCAT1-202ENST00000561978 PARP4Q9UKK3 1724 aaKnown RBP14.81□□□□□ -0.04
PCAT1-202ENST00000561978 MEGF6O75095 1541 aa14.81□□□□□ -0.04
PCAT1-202ENST00000561978 KAT6BQ8WYB5 2073 aa14.8□□□□□ -0.04
PCAT1-202ENST00000561978 LRRC37A3O60309 1634 aa14.8□□□□□ -0.04
PCAT1-202ENST00000561978 SMC4Q9NTJ3 1288 aa14.8□□□□□ -0.04
PCAT1-202ENST00000561978 IPO8O15397 1037 aaKnown RBP14.79□□□□□ -0.04
PCAT1-202ENST00000561978 HMOX1P09601 288 aa14.79□□□□□ -0.04
PCAT1-202ENST00000561978 ALDH1L2Q3SY69 923 aa14.79□□□□□ -0.04
PCAT1-202ENST00000561978 AEBP1Q8IUX7 1158 aa14.79□□□□□ -0.04
PCAT1-202ENST00000561978 RAPGEF4Q8WZA2 1011 aa14.79□□□□□ -0.04
PCAT1-202ENST00000561978 CDCA7Q9BWT1 371 aaPredicted RBP14.79□□□□□ -0.04
PCAT1-202ENST00000561978 IGSF1Q8N6C5 1336 aa14.78□□□□□ -0.04
PCAT1-202ENST00000561978 EXOC5O00471 708 aa14.78□□□□□ -0.04
PCAT1-202ENST00000561978 FTSJ3Q8IY81 847 aaKnown RBP14.78□□□□□ -0.04
PCAT1-202ENST00000561978 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
PCAT1-202ENST00000561978 BCL2L13Q9BXK5 485 aa14.78□□□□□ -0.04
PCAT1-202ENST00000561978 GNAI1P63096 354 aa14.78□□□□□ -0.04
PCAT1-202ENST00000561978 MVPQ14764 893 aaKnown RBP14.78□□□□□ -0.04
PCAT1-202ENST00000561978 SULT6B1Q6IMI4 303 aa14.78□□□□□ -0.04
PCAT1-202ENST00000561978 KIF16BQ96L93 1317 aa14.77□□□□□ -0.04
PCAT1-202ENST00000561978 PHACTR3Q96KR7 559 aa14.77□□□□□ -0.04
PCAT1-202ENST00000561978 IFT57Q9NWB7 429 aa14.77□□□□□ -0.04
PCAT1-202ENST00000561978 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.04
PCAT1-202ENST00000561978 IGHDP01880 384 aa14.76□□□□□ -0.05
PCAT1-202ENST00000561978 SSH1Q8WYL5 1049 aa14.76□□□□□ -0.05
PCAT1-202ENST00000561978 PKNOX2Q96KN3 472 aa14.76□□□□□ -0.05
PCAT1-202ENST00000561978 RWDD1Q9H446 243 aaPredicted RBP14.76□□□□□ -0.05
PCAT1-202ENST00000561978 RGPD1P0DJD0 1748 aa14.76□□□□□ -0.05
PCAT1-202ENST00000561978 NCAPD2Q15021 1401 aa14.76□□□□□ -0.05
PCAT1-202ENST00000561978 TATP17735 454 aaPredicted RBP14.76□□□□□ -0.05
PCAT1-202ENST00000561978 FAM161AQ3B820 660 aa14.76□□□□□ -0.05
PCAT1-202ENST00000561978 MARCH10Q8NA82 808 aaPredicted RBP14.76□□□□□ -0.05
PCAT1-202ENST00000561978 DDX54Q8TDD1 881 aaKnown RBP14.76□□□□□ -0.05
PCAT1-202ENST00000561978 TNS2Q63HR2 1409 aa14.75□□□□□ -0.05
PCAT1-202ENST00000561978 RLBP1P12271 317 aa14.75□□□□□ -0.05
PCAT1-202ENST00000561978 BRPF1P55201 1214 aaPredicted RBP14.75□□□□□ -0.05
PCAT1-202ENST00000561978 ATF7IPQ6VMQ6 1270 aa14.75□□□□□ -0.05
PCAT1-202ENST00000561978 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
PCAT1-202ENST00000561978 OVOS2A0A0G2JMS6 1433 aa14.75□□□□□ -0.05
PCAT1-202ENST00000561978 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
PCAT1-202ENST00000561978 ZCRB1Q8TBF4 217 aaKnown RBP14.74□□□□□ -0.05
PCAT1-202ENST00000561978 DDX19BQ9UMR2 479 aa14.74□□□□□ -0.05
PCAT1-202ENST00000561978 KDRP35968 1356 aa14.73□□□□□ -0.05
PCAT1-202ENST00000561978 ZNF853P0CG23 659 aa14.73□□□□□ -0.05
PCAT1-202ENST00000561978 CFAP44Q96MT7 982 aa14.73□□□□□ -0.05
PCAT1-202ENST00000561978 NOB1Q9ULX3 412 aaKnown RBP14.73□□□□□ -0.05
PCAT1-202ENST00000561978 LAS1LQ9Y4W2 734 aaKnown RBP14.73□□□□□ -0.05
PCAT1-202ENST00000561978 SHANK3Q9BYB0 1731 aa14.73□□□□□ -0.05
PCAT1-202ENST00000561978 TRIM27P14373 513 aa14.72□□□□□ -0.05
PCAT1-202ENST00000561978 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
PCAT1-202ENST00000561978 SRCAPQ6ZRS2 3230 aa14.71□□□□□ -0.05
PCAT1-202ENST00000561978 SOCS7O14512 581 aa14.71□□□□□ -0.05
PCAT1-202ENST00000561978 RGS3P49796 1198 aa14.71□□□□□ -0.05
PCAT1-202ENST00000561978 SKAP1Q86WV1 359 aa14.71□□□□□ -0.05
PCAT1-202ENST00000561978 DDRGK1Q96HY6 314 aa14.71□□□□□ -0.05
PCAT1-202ENST00000561978 PCDHB15Q9Y5E8 787 aa14.71□□□□□ -0.05
PCAT1-202ENST00000561978 FAM196AQ6ZSG2 479 aa14.71□□□□□ -0.06
PCAT1-202ENST00000561978 ARHGAP45Q92619 1136 aa14.71□□□□□ -0.06
PCAT1-202ENST00000561978 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.06
PCAT1-202ENST00000561978 TNNQ9UQP3 1299 aa14.71□□□□□ -0.06
PCAT1-202ENST00000561978 CYP27B1O15528 508 aa14.7□□□□□ -0.06
PCAT1-202ENST00000561978 TRIM37O94972 964 aa14.7□□□□□ -0.06
PCAT1-202ENST00000561978 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
PCAT1-202ENST00000561978 VAMP4O75379 141 aa14.69□□□□□ -0.06
PCAT1-202ENST00000561978 ACSBG1Q96GR2 724 aa14.69□□□□□ -0.06
PCAT1-202ENST00000561978 PKD1L3Q7Z443 1732 aa14.69□□□□□ -0.06
PCAT1-202ENST00000561978 PCDH11XQ9BZA7 1347 aa14.69□□□□□ -0.06
PCAT1-202ENST00000561978 PCDH11YQ9BZA8 1340 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms