RNA–Protein interactions for RNA: ENST00000561838.1

ITGAM-203, Transcript of integrin subunit alpha M, humanhuman

TSL 4

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-203ENST00000561838 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.48
ITGAM-203ENST00000561838 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.48
ITGAM-203ENST00000561838 PHKG2P15735 406 aa18.01■□□□□ 0.47
ITGAM-203ENST00000561838 CCDC87Q9NVE4 849 aa18.01■□□□□ 0.47
ITGAM-203ENST00000561838 ASAP1Q9ULH1 1129 aa18.01■□□□□ 0.47
ITGAM-203ENST00000561838 ZNF831Q5JPB2 1677 aa18.01■□□□□ 0.47
ITGAM-203ENST00000561838 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
ITGAM-203ENST00000561838 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
ITGAM-203ENST00000561838 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
ITGAM-203ENST00000561838 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
ITGAM-203ENST00000561838 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
ITGAM-203ENST00000561838 ITPK1Q13572 414 aa18■□□□□ 0.47
ITGAM-203ENST00000561838 EYA1Q99502 592 aa18■□□□□ 0.47
ITGAM-203ENST00000561838 ATG3Q9NT62 314 aa18■□□□□ 0.47
ITGAM-203ENST00000561838 WWC3Q9ULE0 1092 aa17.99■□□□□ 0.47
ITGAM-203ENST00000561838 BCS1LQ9Y276 419 aa17.99■□□□□ 0.47
ITGAM-203ENST00000561838 TRIM26Q12899 539 aaPredicted RBP17.98■□□□□ 0.47
ITGAM-203ENST00000561838 ARHGAP27Q6ZUM4 889 aa17.98■□□□□ 0.47
ITGAM-203ENST00000561838 SMIM5Q71RC9 77 aa17.98■□□□□ 0.47
ITGAM-203ENST00000561838 RBM46Q8TBY0 533 aaKnown RBP17.98■□□□□ 0.47
ITGAM-203ENST00000561838 CARD14Q9BXL6 1004 aa17.98■□□□□ 0.47
ITGAM-203ENST00000561838 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
ITGAM-203ENST00000561838 DNAJC5GQ8N7S2 189 aa17.97■□□□□ 0.47
ITGAM-203ENST00000561838 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
ITGAM-203ENST00000561838 CNTNAP4Q9C0A0 1308 aa17.97■□□□□ 0.47
ITGAM-203ENST00000561838 KDRP35968 1356 aa17.96■□□□□ 0.47
ITGAM-203ENST00000561838 A0A0G2JLW4 131 aa17.96■□□□□ 0.47
ITGAM-203ENST00000561838 RFC4P35249 363 aa17.96■□□□□ 0.47
ITGAM-203ENST00000561838 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
ITGAM-203ENST00000561838 KIAA1551Q9HCM1 1747 aa17.95■□□□□ 0.46
ITGAM-203ENST00000561838 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
ITGAM-203ENST00000561838 FCHSD2O94868 740 aa17.95■□□□□ 0.46
ITGAM-203ENST00000561838 FSTL1Q12841 308 aa17.95■□□□□ 0.46
ITGAM-203ENST00000561838 C16orf71Q8IYS4 520 aaPredicted RBP17.95■□□□□ 0.46
ITGAM-203ENST00000561838 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
ITGAM-203ENST00000561838 N4BP2Q86UW6 1770 aaPredicted RBP17.94■□□□□ 0.46
ITGAM-203ENST00000561838 POLKQ9UBT6 870 aa17.94■□□□□ 0.46
ITGAM-203ENST00000561838 C4AP0C0L4 1744 aa17.94■□□□□ 0.46
ITGAM-203ENST00000561838 GYS1P13807 737 aa17.93■□□□□ 0.46
ITGAM-203ENST00000561838 DPEP1P16444 411 aa17.93■□□□□ 0.46
ITGAM-203ENST00000561838 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
ITGAM-203ENST00000561838 PIM2Q9P1W9 311 aa17.93■□□□□ 0.46
ITGAM-203ENST00000561838 KDM2BQ8NHM5 1336 aa17.93■□□□□ 0.46
ITGAM-203ENST00000561838 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
ITGAM-203ENST00000561838 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
ITGAM-203ENST00000561838 ARFGEF1Q9Y6D6 1849 aa17.92■□□□□ 0.46
ITGAM-203ENST00000561838 BRCA1P38398 1863 aaKnown RBP17.91■□□□□ 0.46
ITGAM-203ENST00000561838 NMRK2Q9NPI5 230 aa17.91■□□□□ 0.46
ITGAM-203ENST00000561838 COL5A3P25940 1745 aaPredicted RBP17.9■□□□□ 0.46
ITGAM-203ENST00000561838 CABP4P57796 275 aa17.9■□□□□ 0.46
ITGAM-203ENST00000561838 EIF4A2Q14240 407 aaKnown RBP17.9■□□□□ 0.46
ITGAM-203ENST00000561838 DALRD3Q5D0E6 543 aaKnown RBP17.9■□□□□ 0.46
ITGAM-203ENST00000561838 C9orf131Q5VYM1 1079 aa17.9■□□□□ 0.46
ITGAM-203ENST00000561838 SLC4A9Q96Q91 983 aa17.89■□□□□ 0.45
ITGAM-203ENST00000561838 WDR90Q96KV7 1748 aa17.89■□□□□ 0.45
ITGAM-203ENST00000561838 KCNA3P22001 575 aa17.88■□□□□ 0.45
ITGAM-203ENST00000561838 JMYQ8N9B5 988 aa17.88■□□□□ 0.45
ITGAM-203ENST00000561838 KLRG1Q96E93 195 aa17.88■□□□□ 0.45
ITGAM-203ENST00000561838 ZC3H4Q9UPT8 1303 aaKnown RBP17.88■□□□□ 0.45
ITGAM-203ENST00000561838 TIMELESSQ9UNS1 1208 aa17.87■□□□□ 0.45
ITGAM-203ENST00000561838 MTHFSP49914 203 aa17.85■□□□□ 0.45
ITGAM-203ENST00000561838 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
ITGAM-203ENST00000561838 ZNF530Q6P9A1 599 aaPredicted RBP17.85■□□□□ 0.45
ITGAM-203ENST00000561838 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
ITGAM-203ENST00000561838 USP42Q9H9J4 1324 aaKnown RBP17.84■□□□□ 0.45
ITGAM-203ENST00000561838 CRKLP46109 303 aaKnown RBP17.84■□□□□ 0.45
ITGAM-203ENST00000561838 SMC1BQ8NDV3 1235 aa17.84■□□□□ 0.45
ITGAM-203ENST00000561838 RNF181Q9P0P0 153 aa17.84■□□□□ 0.45
ITGAM-203ENST00000561838 TNRC6CQ9HCJ0 1690 aaKnown RBP17.83■□□□□ 0.45
ITGAM-203ENST00000561838 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
ITGAM-203ENST00000561838 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
ITGAM-203ENST00000561838 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
ITGAM-203ENST00000561838 ZPR1O75312 459 aa17.81■□□□□ 0.44
ITGAM-203ENST00000561838 FKBP8Q14318 412 aa17.81■□□□□ 0.44
ITGAM-203ENST00000561838 RRAGCQ9HB90 399 aa17.81■□□□□ 0.44
ITGAM-203ENST00000561838 KCPQ6ZWJ8 1503 aa17.81■□□□□ 0.44
ITGAM-203ENST00000561838 TM4SF1P30408 202 aa17.8■□□□□ 0.44
ITGAM-203ENST00000561838 TNNT2P45379 298 aaPredicted RBP17.8■□□□□ 0.44
ITGAM-203ENST00000561838 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
ITGAM-203ENST00000561838 SBF1O95248 1867 aa17.8■□□□□ 0.44
ITGAM-203ENST00000561838 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
ITGAM-203ENST00000561838 DDR1Q08345 913 aa17.79■□□□□ 0.44
ITGAM-203ENST00000561838 SRP68Q9UHB9 627 aaKnown RBP17.78■□□□□ 0.44
ITGAM-203ENST00000561838 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
ITGAM-203ENST00000561838 LMNB1P20700 586 aa17.77■□□□□ 0.44
ITGAM-203ENST00000561838 INTS5Q6P9B9 1019 aaKnown RBP17.77■□□□□ 0.44
ITGAM-203ENST00000561838 GLTPD2A6NH11 291 aa17.76■□□□□ 0.43
ITGAM-203ENST00000561838 CHRNA5P30532 468 aa17.76■□□□□ 0.43
ITGAM-203ENST00000561838 COL13A1Q5TAT6 717 aaPredicted RBP17.76■□□□□ 0.43
ITGAM-203ENST00000561838 AKAP4Q5JQC9 854 aa17.75■□□□□ 0.43
ITGAM-203ENST00000561838 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
ITGAM-203ENST00000561838 TJP1Q07157 1748 aa17.75■□□□□ 0.43
ITGAM-203ENST00000561838 USPL1Q5W0Q7 1092 aa17.74■□□□□ 0.43
ITGAM-203ENST00000561838 TNS4Q8IZW8 715 aa17.74■□□□□ 0.43
ITGAM-203ENST00000561838 TTLL6Q8N841 843 aa17.74■□□□□ 0.43
ITGAM-203ENST00000561838 PDZRN3Q9UPQ7 1066 aa17.74■□□□□ 0.43
ITGAM-203ENST00000561838 SCN11AQ9UI33 1791 aa17.74■□□□□ 0.43
ITGAM-203ENST00000561838 SOS1Q07889 1333 aaPredicted RBP17.73■□□□□ 0.43
ITGAM-203ENST00000561838 HTRA3P83110 453 aa17.73■□□□□ 0.43
ITGAM-203ENST00000561838 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms