RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 C19orf44Q9H6X5 657 aa8.59□□□□□ -1.03
CAPN3-210ENST00000561817 RCAN3Q9UKA8 241 aa8.59□□□□□ -1.03
CAPN3-210ENST00000561817 NFAT5O94916 1531 aa8.59□□□□□ -1.03
CAPN3-210ENST00000561817 KIF1AQ12756 1690 aa8.59□□□□□ -1.03
CAPN3-210ENST00000561817 NHSL1Q5SYE7 1610 aa8.58□□□□□ -1.04
CAPN3-210ENST00000561817 MAP3K19Q56UN5 1328 aa8.58□□□□□ -1.04
CAPN3-210ENST00000561817 PSDA5PKW4 1024 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-210ENST00000561817 E9PSI1 815 aa8.58□□□□□ -1.04
CAPN3-210ENST00000561817 U2SURPO15042 1029 aaKnown RBP8.58□□□□□ -1.04
CAPN3-210ENST00000561817 TMPOP42166 694 aaKnown RBP8.58□□□□□ -1.04
CAPN3-210ENST00000561817 IRX6P78412 446 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-210ENST00000561817 NKX1-1Q15270 411 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-210ENST00000561817 WDR63Q8IWG1 891 aa8.58□□□□□ -1.04
CAPN3-210ENST00000561817 SPRYD3Q8NCJ5 442 aa8.58□□□□□ -1.04
CAPN3-210ENST00000561817 FBXO41Q8TF61 875 aa8.58□□□□□ -1.04
CAPN3-210ENST00000561817 PTCD2Q8WV60 388 aaKnown RBP8.58□□□□□ -1.04
CAPN3-210ENST00000561817 ORAI2Q96SN7 254 aa8.58□□□□□ -1.04
CAPN3-210ENST00000561817 RRP7AQ9Y3A4 280 aaKnown RBP8.58□□□□□ -1.04
CAPN3-210ENST00000561817 RRP1P56182 461 aaKnown RBP8.57□□□□□ -1.04
CAPN3-210ENST00000561817 EIF4A2Q14240 407 aaKnown RBP8.57□□□□□ -1.04
CAPN3-210ENST00000561817 ESCO1Q5FWF5 840 aa8.57□□□□□ -1.04
CAPN3-210ENST00000561817 SLIT3O75094 1523 aa8.57□□□□□ -1.04
CAPN3-210ENST00000561817 SBNO1A3KN83 1393 aa8.57□□□□□ -1.04
CAPN3-210ENST00000561817 KIF24Q5T7B8 1368 aa8.57□□□□□ -1.04
CAPN3-210ENST00000561817 PHRF1Q9P1Y6 1649 aaKnown RBP8.57□□□□□ -1.04
CAPN3-210ENST00000561817 PPM1GO15355 546 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-210ENST00000561817 DSG2Q14126 1118 aa8.56□□□□□ -1.04
CAPN3-210ENST00000561817 HSP90AB2PQ58FF8 381 aa8.56□□□□□ -1.04
CAPN3-210ENST00000561817 PHACTR3Q96KR7 559 aa8.56□□□□□ -1.04
CAPN3-210ENST00000561817 ALS2Q96Q42 1657 aa8.56□□□□□ -1.04
CAPN3-210ENST00000561817 TBC1D12O60347 775 aa8.55□□□□□ -1.04
CAPN3-210ENST00000561817 PRKAR2BP31323 418 aa8.55□□□□□ -1.04
CAPN3-210ENST00000561817 CADPS2Q86UW7 1296 aa8.55□□□□□ -1.04
CAPN3-210ENST00000561817 FLT4P35916 1363 aa8.55□□□□□ -1.04
CAPN3-210ENST00000561817 USP19O94966 1318 aa8.54□□□□□ -1.04
CAPN3-210ENST00000561817 IL16Q14005 1332 aa8.54□□□□□ -1.04
CAPN3-210ENST00000561817 COL16A1Q07092 1604 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-210ENST00000561817 ARHGEF10O15013 1369 aa8.54□□□□□ -1.04
CAPN3-210ENST00000561817 KDRP35968 1356 aa8.54□□□□□ -1.04
CAPN3-210ENST00000561817 NFE2L2Q16236 605 aa8.54□□□□□ -1.04
CAPN3-210ENST00000561817 ABTB2Q8N961 1025 aa8.54□□□□□ -1.04
CAPN3-210ENST00000561817 PNNQ9H307 717 aaKnown RBP8.54□□□□□ -1.04
CAPN3-210ENST00000561817 PPP4R2Q9NY27 417 aa8.54□□□□□ -1.04
CAPN3-210ENST00000561817 RTL1A6NKG5 1358 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 DLG5Q8TDM6 1919 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 FOXO3O43524 673 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 HMOX1P09601 288 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 HOXC9P31274 260 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 PSME1Q06323 249 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 NEUROD2Q15784 382 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 NUTM2GQ5VZR2 741 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 AHDC1Q5TGY3 1603 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-210ENST00000561817 LTN1O94822 1766 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 IGSF1Q8N6C5 1336 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 MAPK8IP3Q9UPT6 1336 aa8.53□□□□□ -1.04
CAPN3-210ENST00000561817 MED1Q15648 1581 aaPredicted RBP8.52□□□□□ -1.04
CAPN3-210ENST00000561817 PXDNQ92626 1479 aa8.52□□□□□ -1.05
CAPN3-210ENST00000561817 RIPK4P57078 832 aa8.52□□□□□ -1.05
CAPN3-210ENST00000561817 POTEEQ6S8J3 1075 aa8.52□□□□□ -1.05
CAPN3-210ENST00000561817 KRT28Q7Z3Y7 464 aa8.52□□□□□ -1.05
CAPN3-210ENST00000561817 SLAIN2Q9P270 581 aa8.52□□□□□ -1.05
CAPN3-210ENST00000561817 CRYBG1Q9Y4K1 1723 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 ARHGAP33O14559 1287 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 ZNF853P0CG23 659 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 HSPA1LP34931 641 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 XPCQ01831 940 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-210ENST00000561817 SULT6B1Q6IMI4 303 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 IP6K1Q92551 441 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 DDX17Q92841 729 aaKnown RBP8.51□□□□□ -1.05
CAPN3-210ENST00000561817 EYA1Q99502 592 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 NCAPD2Q15021 1401 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 ABCA3Q99758 1704 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 FANCIQ9NVI1 1328 aa8.51□□□□□ -1.05
CAPN3-210ENST00000561817 PLIN1O60240 522 aa8.5□□□□□ -1.05
CAPN3-210ENST00000561817 AMPHP49418 695 aa8.5□□□□□ -1.05
CAPN3-210ENST00000561817 BRINP3Q76B58 766 aa8.5□□□□□ -1.05
CAPN3-210ENST00000561817 ARHGEF25Q86VW2 580 aa8.5□□□□□ -1.05
CAPN3-210ENST00000561817 CRISPLD2Q9H0B8 497 aa8.5□□□□□ -1.05
CAPN3-210ENST00000561817 CAMTA1Q9Y6Y1 1673 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 COL18A1P39060 1754 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 BCAR3O75815 825 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 GCP02774 474 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 RARSP54136 660 aaKnown RBP8.49□□□□□ -1.05
CAPN3-210ENST00000561817 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 C20orf194Q5TEA3 1177 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 KCNH5Q8NCM2 988 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 MYH16Q9H6N6 1097 aa8.49□□□□□ -1.05
CAPN3-210ENST00000561817 TNS3Q68CZ2 1445 aa8.48□□□□□ -1.05
CAPN3-210ENST00000561817 CT47B1P0C2W7 299 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-210ENST00000561817 PDE4AP27815 886 aa8.48□□□□□ -1.05
CAPN3-210ENST00000561817 LMOD2Q6P5Q4 547 aa8.48□□□□□ -1.05
CAPN3-210ENST00000561817 OXER1Q8TDS5 423 aa8.48□□□□□ -1.05
CAPN3-210ENST00000561817 TSR2Q969E8 191 aaKnown RBP8.48□□□□□ -1.05
CAPN3-210ENST00000561817 CCDC9Q9Y3X0 531 aaKnown RBP8.48□□□□□ -1.05
CAPN3-210ENST00000561817 LMO7Q8WWI1 1683 aa8.48□□□□□ -1.05
CAPN3-210ENST00000561817 NPHP3Q7Z494 1330 aa8.48□□□□□ -1.05
CAPN3-210ENST00000561817 CRB1P82279 1406 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms