RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 CCDC155Q8N6L0 562 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 TSC1Q92574 1164 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 SCARF2Q96GP6 870 aaPredicted RBP5.58□□□□□ -1.52
SPG11-225ENST00000561391 KIAA0556O60303 1618 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 ZFYVE16Q7Z3T8 1539 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 CARMIL1Q5VZK9 1371 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 MAGEB6P1A0A0J9YX57 407 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 CFAP99D6REC4 459 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 F12P00748 615 aaPredicted RBP5.57□□□□□ -1.52
SPG11-225ENST00000561391 MAP3K10Q02779 954 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 CCDC116Q8IYX3 515 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 ZBTB3Q9H5J0 574 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 GOPCQ9HD26 462 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 IQGAP2Q13576 1575 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 FHOD3Q2V2M9 1422 aa5.57□□□□□ -1.52
SPG11-225ENST00000561391 CLK2P49760 499 aaKnown RBP5.56□□□□□ -1.52
SPG11-225ENST00000561391 NBPF14Q5TI25 921 aa5.56□□□□□ -1.52
SPG11-225ENST00000561391 ARMC2Q8NEN0 867 aa5.56□□□□□ -1.52
SPG11-225ENST00000561391 WHAMMQ8TF30 809 aa5.56□□□□□ -1.52
SPG11-225ENST00000561391 NANOS1Q8WY41 292 aaKnown RBP5.56□□□□□ -1.52
SPG11-225ENST00000561391 LIMD1Q9UGP4 676 aa5.56□□□□□ -1.52
SPG11-225ENST00000561391 ATP10AO60312 1499 aa5.56□□□□□ -1.52
SPG11-225ENST00000561391 BIVM-ERCC5R4GMW8 1640 aa5.56□□□□□ -1.52
SPG11-225ENST00000561391 RICTORQ6R327 1708 aa5.55□□□□□ -1.52
SPG11-225ENST00000561391 ITGA6P23229 1130 aa5.55□□□□□ -1.52
SPG11-225ENST00000561391 SV2AQ7L0J3 742 aa5.55□□□□□ -1.52
SPG11-225ENST00000561391 VWA5B2Q8N398 1253 aa5.55□□□□□ -1.52
SPG11-225ENST00000561391 MAP4K5Q9Y4K4 846 aa5.55□□□□□ -1.52
SPG11-225ENST00000561391 PCDHB15Q9Y5E8 787 aa5.55□□□□□ -1.52
SPG11-225ENST00000561391 ABCA9Q8IUA7 1624 aa5.55□□□□□ -1.52
SPG11-225ENST00000561391 EFCAB5A4FU69 1503 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 C3P01024 1663 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 ATP10BO94823 1461 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 SHANK2Q9UPX8 1470 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 NUTM2BA6NNL0 878 aaPredicted RBP5.54□□□□□ -1.52
SPG11-225ENST00000561391 NUTM2EB1AL46 878 aaPredicted RBP5.54□□□□□ -1.52
SPG11-225ENST00000561391 ARHGEF15O94989 841 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 SLURP2P0DP57 97 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 NUTM2DQ5VT03 806 aaPredicted RBP5.54□□□□□ -1.52
SPG11-225ENST00000561391 RSBN1LQ6PCB5 846 aaPredicted RBP5.54□□□□□ -1.52
SPG11-225ENST00000561391 NUTM2AQ8IVF1 878 aaPredicted RBP5.54□□□□□ -1.52
SPG11-225ENST00000561391 FAM9AQ8IZU1 332 aaPredicted RBP5.54□□□□□ -1.52
SPG11-225ENST00000561391 CARD14Q9BXL6 1004 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 PGPEP1Q9NXJ5 209 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 ALKQ9UM73 1620 aa5.54□□□□□ -1.52
SPG11-225ENST00000561391 MAGI2Q86UL8 1455 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 HECW1Q76N89 1606 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 MSTNO14793 375 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 SPINT1O43278 529 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 HRCP23327 699 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 RXRBP28702 533 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 GJA5P36382 358 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 CBLBQ13191 982 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 C1QTNF2Q9BXJ5 285 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 C9orf84Q5VXU9 1444 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 CPS1P31327 1500 aa5.53□□□□□ -1.52
SPG11-225ENST00000561391 ABCA8O94911 1581 aa5.52□□□□□ -1.53
SPG11-225ENST00000561391 SLC35F4A4IF30 521 aa5.52□□□□□ -1.53
SPG11-225ENST00000561391 PER1O15534 1290 aaPredicted RBP5.52□□□□□ -1.53
SPG11-225ENST00000561391 ADAMTS2O95450 1211 aa5.52□□□□□ -1.53
SPG11-225ENST00000561391 QPCTQ16769 361 aa5.52□□□□□ -1.53
SPG11-225ENST00000561391 PPP1R26Q5T8A7 1209 aaPredicted RBP5.52□□□□□ -1.53
SPG11-225ENST00000561391 C14orf37Q86TY3 774 aa5.52□□□□□ -1.53
SPG11-225ENST00000561391 TRMT44Q8IYL2 757 aaKnown RBP5.52□□□□□ -1.53
SPG11-225ENST00000561391 GALNT6Q8NCL4 622 aa5.52□□□□□ -1.53
SPG11-225ENST00000561391 CABLES1Q8TDN4 633 aa5.52□□□□□ -1.53
SPG11-225ENST00000561391 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.52□□□□□ -1.53
SPG11-225ENST00000561391 POLMQ9NP87 494 aaPredicted RBP5.52□□□□□ -1.53
SPG11-225ENST00000561391 ENAMQ9NRM1 1142 aa5.52□□□□□ -1.53
SPG11-225ENST00000561391 SETBP1Q9Y6X0 1596 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 KIF27Q86VH2 1401 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 SCAPERQ9BY12 1400 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 MEX3CQ5U5Q3 659 aaKnown RBP5.51□□□□□ -1.53
SPG11-225ENST00000561391 ZNF772Q68DY9 489 aaPredicted RBP5.51□□□□□ -1.53
SPG11-225ENST00000561391 SH3RF1Q7Z6J0 888 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 KRTAP4-12Q9BQ66 201 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 TIMELESSQ9UNS1 1208 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 UGGT2Q9NYU1 1516 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 RAPGEF2Q9Y4G8 1499 aa5.51□□□□□ -1.53
SPG11-225ENST00000561391 ZMYM4Q5VZL5 1548 aa5.5□□□□□ -1.53
SPG11-225ENST00000561391 PHF20L1A8MW92 1017 aa5.5□□□□□ -1.53
SPG11-225ENST00000561391 YY1P25490 414 aa5.5□□□□□ -1.53
SPG11-225ENST00000561391 RELBQ01201 579 aa5.5□□□□□ -1.53
SPG11-225ENST00000561391 RTL5Q5HYW3 569 aaPredicted RBP5.5□□□□□ -1.53
SPG11-225ENST00000561391 PRPF38BQ5VTL8 546 aaKnown RBP5.5□□□□□ -1.53
SPG11-225ENST00000561391 FBXO31Q5XUX0 539 aaPredicted RBP5.5□□□□□ -1.53
SPG11-225ENST00000561391 LYPD4Q6UWN0 246 aa5.5□□□□□ -1.53
SPG11-225ENST00000561391 PODNQ7Z5L7 613 aa5.5□□□□□ -1.53
SPG11-225ENST00000561391 AFAP1Q8N556 730 aa5.5□□□□□ -1.53
SPG11-225ENST00000561391 ZMYM3Q14202 1370 aa5.5□□□□□ -1.53
SPG11-225ENST00000561391 TCOF1Q13428 1488 aaKnown RBP5.5□□□□□ -1.53
SPG11-225ENST00000561391 PLEKHD1A6NEE1 506 aa5.49□□□□□ -1.53
SPG11-225ENST00000561391 AP1G2O75843 785 aa5.49□□□□□ -1.53
SPG11-225ENST00000561391 RFC5P40937 340 aa5.49□□□□□ -1.53
SPG11-225ENST00000561391 CTSOP43234 321 aaPredicted RBP5.49□□□□□ -1.53
SPG11-225ENST00000561391 SRSF11Q05519 484 aaKnown RBP5.49□□□□□ -1.53
SPG11-225ENST00000561391 DHX9Q08211 1270 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms