RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-222	ENST00000561279	ATG3	Q9NT62	314 aa		18.99	■□□□□ 0.63
IDH3A-222	ENST00000561279	AMIGO3	Q86WK7	504 aa		18.98	■□□□□ 0.63
IDH3A-222	ENST00000561279	DCAF5	Q96JK2	942 aa		18.98	■□□□□ 0.63
IDH3A-222	ENST00000561279	IGSF1	Q8N6C5	1336 aa		18.98	■□□□□ 0.63
IDH3A-222	ENST00000561279	UBR3	Q6ZT12	1888 aa		18.97	■□□□□ 0.63
IDH3A-222	ENST00000561279	ITPK1	Q13572	414 aa		18.97	■□□□□ 0.63
IDH3A-222	ENST00000561279	MORC1	Q86VD1	984 aa		18.97	■□□□□ 0.63
IDH3A-222	ENST00000561279	SMIM5	Q71RC9	77 aa		18.96	■□□□□ 0.63
IDH3A-222	ENST00000561279	RTCB	Q9Y3I0	505 aa	Known RBP	18.96	■□□□□ 0.63
IDH3A-222	ENST00000561279	TRAPPC3L	Q5T215	181 aa		18.95	■□□□□ 0.62
IDH3A-222	ENST00000561279	CCER1	Q8TC90	406 aa	Predicted RBP	18.95	■□□□□ 0.62
IDH3A-222	ENST00000561279	RBM42	Q9BTD8	480 aa	Known RBP	18.95	■□□□□ 0.62
IDH3A-222	ENST00000561279	KNSTRN	Q9Y448	316 aa		18.95	■□□□□ 0.62
IDH3A-222	ENST00000561279	CABP4	P57796	275 aa		18.94	■□□□□ 0.62
IDH3A-222	ENST00000561279	C1orf141	Q5JVX7	400 aa		18.94	■□□□□ 0.62
IDH3A-222	ENST00000561279	RC3H1	Q5TC82	1133 aa	Known RBP	18.94	■□□□□ 0.62
IDH3A-222	ENST00000561279	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.94	■□□□□ 0.62
IDH3A-222	ENST00000561279	MTHFS	P49914	203 aa		18.93	■□□□□ 0.62
IDH3A-222	ENST00000561279	NLGN1	Q8N2Q7	840 aa		18.93	■□□□□ 0.62
IDH3A-222	ENST00000561279	ADRA2B	P18089	450 aa		18.92	■□□□□ 0.62
IDH3A-222	ENST00000561279	MMP10	P09238	476 aa		18.91	■□□□□ 0.62
IDH3A-222	ENST00000561279	GPBP1L1	Q9HC44	474 aa	Predicted RBP	18.91	■□□□□ 0.62
IDH3A-222	ENST00000561279	RFC4	P35249	363 aa		18.9	■□□□□ 0.62
IDH3A-222	ENST00000561279	RPS6KA4	O75676	772 aa		18.89	■□□□□ 0.61
IDH3A-222	ENST00000561279	SULT6B1	Q6IMI4	303 aa		18.89	■□□□□ 0.61
IDH3A-222	ENST00000561279	KDR	P35968	1356 aa		18.89	■□□□□ 0.61
IDH3A-222	ENST00000561279	TGFB2	P61812	414 aa		18.88	■□□□□ 0.61
IDH3A-222	ENST00000561279	ARHGEF1	Q92888	912 aa	Known RBP	18.88	■□□□□ 0.61
IDH3A-222	ENST00000561279	SLC4A9	Q96Q91	983 aa		18.88	■□□□□ 0.61
IDH3A-222	ENST00000561279	CNTNAP4	Q9C0A0	1308 aa		18.88	■□□□□ 0.61
IDH3A-222	ENST00000561279	ATP10D	Q9P241	1426 aa		18.88	■□□□□ 0.61
IDH3A-222	ENST00000561279	GOLGB1	Q14789	3259 aa	Known RBP	18.88	■□□□□ 0.61
IDH3A-222	ENST00000561279	ZNF831	Q5JPB2	1677 aa		18.88	■□□□□ 0.61
IDH3A-222	ENST00000561279	NFATC2IP	Q8NCF5	419 aa		18.87	■□□□□ 0.61
IDH3A-222	ENST00000561279	WWC3	Q9ULE0	1092 aa		18.87	■□□□□ 0.61
IDH3A-222	ENST00000561279	PTCD1	O75127	700 aa	Known RBP	18.86	■□□□□ 0.61
IDH3A-222	ENST00000561279	AEBP1	Q8IUX7	1158 aa		18.86	■□□□□ 0.61
IDH3A-222	ENST00000561279	CCDC87	Q9NVE4	849 aa		18.86	■□□□□ 0.61
IDH3A-222	ENST00000561279	IL13	P35225	146 aa		18.85	■□□□□ 0.61
IDH3A-222	ENST00000561279	PARP3	Q9Y6F1	533 aa		18.85	■□□□□ 0.61
IDH3A-222	ENST00000561279	KDM6A	O15550	1401 aa	Predicted RBP	18.84	■□□□□ 0.61
IDH3A-222	ENST00000561279	GYS1	P13807	737 aa		18.84	■□□□□ 0.61
IDH3A-222	ENST00000561279	AKAP4	Q5JQC9	854 aa		18.83	■□□□□ 0.6
IDH3A-222	ENST00000561279	ZNF526	Q8TF50	670 aa	Predicted RBP	18.83	■□□□□ 0.6
IDH3A-222	ENST00000561279	CRKL	P46109	303 aa	Known RBP	18.82	■□□□□ 0.6
IDH3A-222	ENST00000561279	BCS1L	Q9Y276	419 aa		18.82	■□□□□ 0.6
IDH3A-222	ENST00000561279	ADCY9	O60503	1353 aa		18.81	■□□□□ 0.6
IDH3A-222	ENST00000561279		A0A0G2JLW4	131 aa		18.81	■□□□□ 0.6
IDH3A-222	ENST00000561279	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.81	■□□□□ 0.6
IDH3A-222	ENST00000561279	COL5A3	P25940	1745 aa	Predicted RBP	18.8	■□□□□ 0.6
IDH3A-222	ENST00000561279	PXDNL	A1KZ92	1463 aa		18.79	■□□□□ 0.6
IDH3A-222	ENST00000561279	CIC	Q96RK0	1608 aa	Predicted RBP	18.79	■□□□□ 0.6
IDH3A-222	ENST00000561279	SLC52A2	Q9HAB3	445 aa		18.79	■□□□□ 0.6
IDH3A-222	ENST00000561279	KIF13B	Q9NQT8	1826 aa		18.79	■□□□□ 0.6
IDH3A-222	ENST00000561279	FCHSD2	O94868	740 aa		18.78	■□□□□ 0.6
IDH3A-222	ENST00000561279	DPEP1	P16444	411 aa		18.78	■□□□□ 0.6
IDH3A-222	ENST00000561279	ARHGAP27	Q6ZUM4	889 aa		18.78	■□□□□ 0.6
IDH3A-222	ENST00000561279	MYH14	Q7Z406	1995 aa	Known RBP	18.77	■□□□□ 0.6
IDH3A-222	ENST00000561279	C10orf71	Q711Q0	1435 aa		18.77	■□□□□ 0.6
IDH3A-222	ENST00000561279	KIF7	Q2M1P5	1343 aa		18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	RNMT	O43148	476 aa	Known RBP	18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	DIAPH1	O60610	1272 aa	Known RBP	18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	ZPR1	O75312	459 aa		18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	HMOX1	P09601	288 aa		18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	PIM2	Q9P1W9	311 aa		18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	C4A	P0C0L4	1744 aa		18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	SCN11A	Q9UI33	1791 aa		18.76	■□□□□ 0.59
IDH3A-222	ENST00000561279	USP42	Q9H9J4	1324 aa	Known RBP	18.75	■□□□□ 0.59
IDH3A-222	ENST00000561279	HSPA6	P17066	643 aa		18.75	■□□□□ 0.59
IDH3A-222	ENST00000561279	INTS5	Q6P9B9	1019 aa	Known RBP	18.75	■□□□□ 0.59
IDH3A-222	ENST00000561279	LGR6	Q9HBX8	967 aa		18.75	■□□□□ 0.59
IDH3A-222	ENST00000561279	FKBP8	Q14318	412 aa		18.74	■□□□□ 0.59
IDH3A-222	ENST00000561279	SRP68	Q9UHB9	627 aa	Known RBP	18.74	■□□□□ 0.59
IDH3A-222	ENST00000561279	PER1	O15534	1290 aa	Predicted RBP	18.73	■□□□□ 0.59
IDH3A-222	ENST00000561279	CC2D1B	Q5T0F9	858 aa	Known RBP	18.73	■□□□□ 0.59
IDH3A-222	ENST00000561279	DNAJC10	Q8IXB1	793 aa		18.73	■□□□□ 0.59
IDH3A-222	ENST00000561279	MTHFSD	Q2M296	383 aa	Known RBP	18.72	■□□□□ 0.59
IDH3A-222	ENST00000561279	DALRD3	Q5D0E6	543 aa	Known RBP	18.72	■□□□□ 0.59
IDH3A-222	ENST00000561279	KIF3C	O14782	793 aa		18.71	■□□□□ 0.59
IDH3A-222	ENST00000561279	CYP19A1	P11511	503 aa	Predicted RBP	18.71	■□□□□ 0.59
IDH3A-222	ENST00000561279	KCNA3	P22001	575 aa		18.71	■□□□□ 0.59
IDH3A-222	ENST00000561279	TM4SF1	P30408	202 aa		18.71	■□□□□ 0.59
IDH3A-222	ENST00000561279	SLC39A6	Q13433	755 aa		18.71	■□□□□ 0.59
IDH3A-222	ENST00000561279	VSIG10	Q8N0Z9	540 aa		18.71	■□□□□ 0.59
IDH3A-222	ENST00000561279	KIAA1551	Q9HCM1	1747 aa		18.71	■□□□□ 0.59
IDH3A-222	ENST00000561279	DDR1	Q08345	913 aa		18.7	■□□□□ 0.58
IDH3A-222	ENST00000561279	USPL1	Q5W0Q7	1092 aa		18.7	■□□□□ 0.58
IDH3A-222	ENST00000561279	TJP1	Q07157	1748 aa		18.69	■□□□□ 0.58
IDH3A-222	ENST00000561279	TTC5	Q8N0Z6	440 aa		18.69	■□□□□ 0.58
IDH3A-222	ENST00000561279	NARF	Q9UHQ1	456 aa		18.69	■□□□□ 0.58
IDH3A-222	ENST00000561279	SOS1	Q07889	1333 aa	Predicted RBP	18.69	■□□□□ 0.58
IDH3A-222	ENST00000561279	POLRMT	O00411	1230 aa	Known RBP	18.68	■□□□□ 0.58
IDH3A-222	ENST00000561279	TOMM70	O94826	608 aa		18.68	■□□□□ 0.58
IDH3A-222	ENST00000561279	STARD3NL	O95772	234 aa		18.67	■□□□□ 0.58
IDH3A-222	ENST00000561279	C9orf131	Q5VYM1	1079 aa		18.67	■□□□□ 0.58
IDH3A-222	ENST00000561279	NPC1L1	Q9UHC9	1359 aa		18.67	■□□□□ 0.58
IDH3A-222	ENST00000561279	MRC1	P22897	1456 aa		18.66	■□□□□ 0.58
IDH3A-222	ENST00000561279	U2SURP	O15042	1029 aa	Known RBP	18.66	■□□□□ 0.58
IDH3A-222	ENST00000561279	TEF	Q10587	303 aa		18.66	■□□□□ 0.58

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