RNA–Protein interactions for RNA: ENST00000561204.5

MEIS3-211, Transcript of Meis homeobox 3, humanhuman

TSL 1 (best)

Gene MEIS3, Length 2,195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-211ENST00000561204 SSFA2P28290 1259 aa21.43■■□□□ 1.02
MEIS3-211ENST00000561204 GNAI3P08754 354 aa21.42■■□□□ 1.02
MEIS3-211ENST00000561204 SOS1Q07889 1333 aaPredicted RBP21.42■■□□□ 1.02
MEIS3-211ENST00000561204 SALL3Q9BXA9 1300 aa21.42■■□□□ 1.02
MEIS3-211ENST00000561204 N4BP2Q86UW6 1770 aaPredicted RBP21.42■■□□□ 1.02
MEIS3-211ENST00000561204 PNMA6EA0A0J9YXQ4 647 aa21.41■■□□□ 1.02
MEIS3-211ENST00000561204 USHBP1Q8N6Y0 703 aa21.41■■□□□ 1.02
MEIS3-211ENST00000561204 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
MEIS3-211ENST00000561204 PANK2Q9BZ23 570 aa21.41■■□□□ 1.02
MEIS3-211ENST00000561204 LTN1O94822 1766 aa21.41■■□□□ 1.02
MEIS3-211ENST00000561204 REC8O95072 547 aa21.4■■□□□ 1.02
MEIS3-211ENST00000561204 ATP8B2P98198 1209 aa21.4■■□□□ 1.02
MEIS3-211ENST00000561204 TUBGCP6Q96RT7 1819 aa21.4■■□□□ 1.02
MEIS3-211ENST00000561204 ERC2O15083 957 aa21.4■■□□□ 1.02
MEIS3-211ENST00000561204 CLEC17AQ6ZS10 378 aa21.4■■□□□ 1.02
MEIS3-211ENST00000561204 TSHZ3Q63HK5 1081 aa21.39■■□□□ 1.01
MEIS3-211ENST00000561204 LRRCC1Q9C099 1032 aa21.39■■□□□ 1.01
MEIS3-211ENST00000561204 PHF8Q9UPP1 1060 aa21.39■■□□□ 1.01
MEIS3-211ENST00000561204 C14orf37Q86TY3 774 aa21.38■■□□□ 1.01
MEIS3-211ENST00000561204 SKOR2Q2VWA4 1001 aaPredicted RBP21.38■■□□□ 1.01
MEIS3-211ENST00000561204 IBTKQ9P2D0 1353 aaPredicted RBP21.38■■□□□ 1.01
MEIS3-211ENST00000561204 PXDNLA1KZ92 1463 aa21.38■■□□□ 1.01
MEIS3-211ENST00000561204 AK9Q5TCS8 1911 aa21.38■■□□□ 1.01
MEIS3-211ENST00000561204 MRE11P49959 708 aa21.37■■□□□ 1.01
MEIS3-211ENST00000561204 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
MEIS3-211ENST00000561204 PTMSP20962 102 aa21.37■■□□□ 1.01
MEIS3-211ENST00000561204 USP44Q9H0E7 712 aa21.37■■□□□ 1.01
MEIS3-211ENST00000561204 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
MEIS3-211ENST00000561204 IP6K1Q92551 441 aa21.36■■□□□ 1.01
MEIS3-211ENST00000561204 NFAT5O94916 1531 aa21.36■■□□□ 1.01
MEIS3-211ENST00000561204 MX1P20591 662 aa21.36■■□□□ 1.01
MEIS3-211ENST00000561204 HDGFL1Q5TGJ6 251 aa21.36■■□□□ 1.01
MEIS3-211ENST00000561204 CHD2O14647 1828 aaKnown RBP21.35■■□□□ 1.01
MEIS3-211ENST00000561204 ST18O60284 1047 aa21.35■■□□□ 1.01
MEIS3-211ENST00000561204 PHAXQ9H814 394 aaKnown RBP21.35■■□□□ 1.01
MEIS3-211ENST00000561204 GRPEL1Q9HAV7 217 aa21.35■■□□□ 1.01
MEIS3-211ENST00000561204 BAG4O95429 457 aaKnown RBP21.34■■□□□ 1.01
MEIS3-211ENST00000561204 NBPF6Q5VWK0 638 aa21.34■■□□□ 1.01
MEIS3-211ENST00000561204 NBPF4Q96M43 638 aa21.34■■□□□ 1.01
MEIS3-211ENST00000561204 ISY1Q9ULR0 285 aaKnown RBP21.34■■□□□ 1.01
MEIS3-211ENST00000561204 RBM33Q96EV2 1170 aaKnown RBP21.34■■□□□ 1.01
MEIS3-211ENST00000561204 CYP2E1P05181 493 aaPredicted RBP21.33■■□□□ 1.01
MEIS3-211ENST00000561204 MED1Q15648 1581 aaPredicted RBP21.33■■□□□ 1.01
MEIS3-211ENST00000561204 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
MEIS3-211ENST00000561204 GAS2L3Q86XJ1 694 aa21.32■■□□□ 1
MEIS3-211ENST00000561204 ESYT1Q9BSJ8 1104 aa21.32■■□□□ 1
MEIS3-211ENST00000561204 STAP2Q9UGK3 403 aa21.32■■□□□ 1
MEIS3-211ENST00000561204 NUCB2P80303 420 aa21.31■■□□□ 1
MEIS3-211ENST00000561204 LGR6Q9HBX8 967 aa21.31■■□□□ 1
MEIS3-211ENST00000561204 SETD1BQ9UPS6 1966 aaKnown RBP21.31■■□□□ 1
MEIS3-211ENST00000561204 GOLGA6L22H0YM25 854 aa21.31■■□□□ 1
MEIS3-211ENST00000561204 PKP1Q13835 747 aa21.31■■□□□ 1
MEIS3-211ENST00000561204 RRAGDQ9NQL2 400 aaPredicted RBP21.31■■□□□ 1
MEIS3-211ENST00000561204 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
MEIS3-211ENST00000561204 ZGPATQ8N5A5 531 aaKnown RBP21.3■■□□□ 1
MEIS3-211ENST00000561204 SSH3Q8TE77 659 aa21.3■■□□□ 1
MEIS3-211ENST00000561204 CWC22Q9HCG8 908 aaKnown RBP21.3■■□□□ 1
MEIS3-211ENST00000561204 RGPD2P0DJD1 1756 aa21.29■■□□□ 1
MEIS3-211ENST00000561204 KDM3BQ7LBC6 1761 aa21.29■■□□□ 1
MEIS3-211ENST00000561204 CHMLP26374 656 aa21.29■■□□□ 1
MEIS3-211ENST00000561204 EIF2S2P20042 333 aaKnown RBP21.29■■□□□ 1
MEIS3-211ENST00000561204 SRCIN1Q9C0H9 1055 aa21.29■■□□□ 1
MEIS3-211ENST00000561204 ANKLE2Q86XL3 938 aa21.28■■□□□ 1
MEIS3-211ENST00000561204 PSME1Q06323 249 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 UNC5CLQ8IV45 518 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 RILPL2Q969X0 211 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 PHRF1Q9P1Y6 1649 aaKnown RBP21.27■■□□□ 1
MEIS3-211ENST00000561204 TRIM6-TRIM34B2RNG4 842 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 KCNQ3O43525 872 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 KLHL40Q2TBA0 621 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 PPP1R42Q7Z4L9 355 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 ANO8Q9HCE9 1232 aaPredicted RBP21.27■■□□□ 1
MEIS3-211ENST00000561204 CHPF2Q9P2E5 772 aa21.27■■□□□ 1
MEIS3-211ENST00000561204 HOXB7P09629 217 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 POLA2Q14181 598 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 IL1RAPL2Q9NP60 686 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 AOX1Q06278 1338 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 ADGRL3Q9HAR2 1447 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 LMO7Q8WWI1 1683 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 ZBTB7CA1YPR0 619 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 NEK4P51957 841 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
MEIS3-211ENST00000561204 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
MEIS3-211ENST00000561204 MCTP1Q6DN14 999 aa21.25■□□□□ 0.99
MEIS3-211ENST00000561204 ZDHHC9Q9Y397 364 aa21.25■□□□□ 0.99
MEIS3-211ENST00000561204 DDX49Q9Y6V7 483 aaKnown RBP21.25■□□□□ 0.99
MEIS3-211ENST00000561204 NBPF7P0C2Y1 421 aaPredicted RBP21.24■□□□□ 0.99
MEIS3-211ENST00000561204 ANO2Q9NQ90 1003 aa21.24■□□□□ 0.99
MEIS3-211ENST00000561204 SURF6O75683 361 aaKnown RBP21.23■□□□□ 0.99
MEIS3-211ENST00000561204 AKAP4Q5JQC9 854 aa21.23■□□□□ 0.99
MEIS3-211ENST00000561204 BEND3Q5T5X7 828 aa21.23■□□□□ 0.99
MEIS3-211ENST00000561204 NUTM1Q86Y26 1132 aa21.23■□□□□ 0.99
MEIS3-211ENST00000561204 TMX3Q96JJ7 454 aa21.23■□□□□ 0.99
MEIS3-211ENST00000561204 PI4KAP2A4QPH2 592 aa21.23■□□□□ 0.99
MEIS3-211ENST00000561204 RAB11FIP3O75154 756 aa21.23■□□□□ 0.99
MEIS3-211ENST00000561204 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
MEIS3-211ENST00000561204 PI4KAP1Q8N8J0 262 aa21.23■□□□□ 0.99
MEIS3-211ENST00000561204 DNAAF4Q8WXU2 420 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms