RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 SYT17Q9BSW7 474 aa9.64□□□□□ -0.87
ZEB1-221ENST00000561061 TMEM121BQ9BXQ6 578 aaPredicted RBP9.64□□□□□ -0.87
ZEB1-221ENST00000561061 C5P01031 1676 aa9.64□□□□□ -0.87
ZEB1-221ENST00000561061 TTC21BQ7Z4L5 1316 aa9.63□□□□□ -0.87
ZEB1-221ENST00000561061 NKX1-1Q15270 411 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-221ENST00000561061 MICALL2Q8IY33 904 aa9.63□□□□□ -0.87
ZEB1-221ENST00000561061 TTC21AQ8NDW8 1320 aa9.62□□□□□ -0.87
ZEB1-221ENST00000561061 G3V3G9 751 aa9.62□□□□□ -0.87
ZEB1-221ENST00000561061 EXOC5O00471 708 aa9.62□□□□□ -0.87
ZEB1-221ENST00000561061 CSB-PGBD3P0DP91 1061 aa9.62□□□□□ -0.87
ZEB1-221ENST00000561061 KCNH5Q8NCM2 988 aa9.62□□□□□ -0.87
ZEB1-221ENST00000561061 EVC2Q86UK5 1308 aa9.61□□□□□ -0.87
ZEB1-221ENST00000561061 SENP3-EIF4A1A0A087X0R7 540 aa9.61□□□□□ -0.87
ZEB1-221ENST00000561061 UBR3Q6ZT12 1888 aa9.6□□□□□ -0.87
ZEB1-221ENST00000561061 ZNF827Q17R98 1081 aa9.6□□□□□ -0.87
ZEB1-221ENST00000561061 ACSBG1Q96GR2 724 aa9.6□□□□□ -0.87
ZEB1-221ENST00000561061 ARXQ96QS3 562 aa9.6□□□□□ -0.87
ZEB1-221ENST00000561061 KTN1Q86UP2 1357 aaKnown RBP9.6□□□□□ -0.87
ZEB1-221ENST00000561061 CD163L1Q9NR16 1453 aa9.59□□□□□ -0.87
ZEB1-221ENST00000561061 ERBB3P21860 1342 aa9.59□□□□□ -0.87
ZEB1-221ENST00000561061 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.87
ZEB1-221ENST00000561061 PPP1R37O75864 691 aa9.59□□□□□ -0.87
ZEB1-221ENST00000561061 C1QTNF8P60827 252 aa9.59□□□□□ -0.87
ZEB1-221ENST00000561061 USP31Q70CQ4 1352 aa9.59□□□□□ -0.87
ZEB1-221ENST00000561061 LCE2DQ5TA82 110 aaPredicted RBP9.58□□□□□ -0.88
ZEB1-221ENST00000561061 TOGARAM1Q9Y4F4 1720 aa9.57□□□□□ -0.88
ZEB1-221ENST00000561061 TMEM92Q6UXU6 159 aa9.57□□□□□ -0.88
ZEB1-221ENST00000561061 LRRC4BQ9NT99 713 aa9.57□□□□□ -0.88
ZEB1-221ENST00000561061 ROCK2O75116 1388 aaKnown RBP9.56□□□□□ -0.88
ZEB1-221ENST00000561061 SBNO2Q9Y2G9 1366 aa9.56□□□□□ -0.88
ZEB1-221ENST00000561061 IL2RBP14784 551 aa9.56□□□□□ -0.88
ZEB1-221ENST00000561061 NLRP2Q9NX02 1062 aa9.56□□□□□ -0.88
ZEB1-221ENST00000561061 PNPLA7Q6ZV29 1317 aa9.56□□□□□ -0.88
ZEB1-221ENST00000561061 GPR162Q16538 588 aa9.55□□□□□ -0.88
ZEB1-221ENST00000561061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.55□□□□□ -0.883e-6■■■■□ 22.7
ZEB1-221ENST00000561061 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
ZEB1-221ENST00000561061 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
ZEB1-221ENST00000561061 FAM163AQ96GL9 167 aaPredicted RBP9.55□□□□□ -0.88
ZEB1-221ENST00000561061 EDC4Q6P2E9 1401 aaKnown RBP9.55□□□□□ -0.88
ZEB1-221ENST00000561061 MAP2P11137 1827 aaKnown RBP9.54□□□□□ -0.88
ZEB1-221ENST00000561061 KIF13BQ9NQT8 1826 aa9.54□□□□□ -0.88
ZEB1-221ENST00000561061 PKD1L3Q7Z443 1732 aa9.54□□□□□ -0.88
ZEB1-221ENST00000561061 NSD2O96028 1365 aa9.54□□□□□ -0.88
ZEB1-221ENST00000561061 GIGYF1O75420 1035 aaPredicted RBP9.54□□□□□ -0.88
ZEB1-221ENST00000561061 SLC27A3Q5K4L6 730 aa9.54□□□□□ -0.88
ZEB1-221ENST00000561061 NME9Q86XW9 330 aa9.54□□□□□ -0.88
ZEB1-221ENST00000561061 SLC16A10Q8TF71 515 aa9.54□□□□□ -0.88
ZEB1-221ENST00000561061 C4BP0C0L5 1744 aa9.53□□□□□ -0.88
ZEB1-221ENST00000561061 BRCA1P38398 1863 aaKnown RBP9.53□□□□□ -0.88
ZEB1-221ENST00000561061 NLGN2Q8NFZ4 835 aa9.53□□□□□ -0.88
ZEB1-221ENST00000561061 POLD1P28340 1107 aa9.52□□□□□ -0.89
ZEB1-221ENST00000561061 KIAA1551Q9HCM1 1747 aa9.52□□□□□ -0.89
ZEB1-221ENST00000561061 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.89
ZEB1-221ENST00000561061 MEGF6O75095 1541 aa9.51□□□□□ -0.89
ZEB1-221ENST00000561061 A0A1W2PP64 1363 aa9.51□□□□□ -0.89
ZEB1-221ENST00000561061 ANKRD36BQ8N2N9 1353 aa9.51□□□□□ -0.89
ZEB1-221ENST00000561061 ANKRD26Q9UPS8 1709 aa9.51□□□□□ -0.89
ZEB1-221ENST00000561061 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
ZEB1-221ENST00000561061 VIRMAQ69YN4 1812 aaKnown RBP9.5□□□□□ -0.89
ZEB1-221ENST00000561061 YBX3P16989 372 aaKnown RBP eCLIP9.5□□□□□ -0.89
ZEB1-221ENST00000561061 KCNQ4P56696 695 aa9.5□□□□□ -0.89
ZEB1-221ENST00000561061 TFCP2L1Q9NZI6 479 aa9.5□□□□□ -0.89
ZEB1-221ENST00000561061 ARFGEF1Q9Y6D6 1849 aa9.49□□□□□ -0.89
ZEB1-221ENST00000561061 ATP10DQ9P241 1426 aa9.49□□□□□ -0.89
ZEB1-221ENST00000561061 HDGFL2Q7Z4V5 671 aaPredicted RBP9.49□□□□□ -0.89
ZEB1-221ENST00000561061 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
ZEB1-221ENST00000561061 IP6K1Q92551 441 aa9.49□□□□□ -0.89
ZEB1-221ENST00000561061 ADCY9O60503 1353 aa9.49□□□□□ -0.89
ZEB1-221ENST00000561061 CICQ96RK0 1608 aaPredicted RBP9.49□□□□□ -0.89
ZEB1-221ENST00000561061 GTPBP6O43824 516 aaPredicted RBP9.48□□□□□ -0.89
ZEB1-221ENST00000561061 ST18O60284 1047 aa9.48□□□□□ -0.89
ZEB1-221ENST00000561061 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
ZEB1-221ENST00000561061 SYTL4Q96C24 671 aaPredicted RBP9.48□□□□□ -0.89
ZEB1-221ENST00000561061 SIN3AQ96ST3 1273 aa9.48□□□□□ -0.89
ZEB1-221ENST00000561061 SBF1O95248 1867 aa9.48□□□□□ -0.89
ZEB1-221ENST00000561061 CCDC88AQ3V6T2 1871 aa9.47□□□□□ -0.89
ZEB1-221ENST00000561061 GRIN3BO60391 1043 aa9.47□□□□□ -0.89
ZEB1-221ENST00000561061 TMC1Q8TDI8 760 aa9.47□□□□□ -0.89
ZEB1-221ENST00000561061 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
ZEB1-221ENST00000561061 SLC12A5Q9H2X9 1139 aa9.47□□□□□ -0.89
ZEB1-221ENST00000561061 CCNL1Q9UK58 526 aaPredicted RBP9.47□□□□□ -0.89
ZEB1-221ENST00000561061 COL5A3P25940 1745 aaPredicted RBP9.47□□□□□ -0.89
ZEB1-221ENST00000561061 RTL1A6NKG5 1358 aa9.47□□□□□ -0.89
ZEB1-221ENST00000561061 MYH14Q7Z406 1995 aaKnown RBP9.46□□□□□ -0.89
ZEB1-221ENST00000561061 C4AP0C0L4 1744 aa9.46□□□□□ -0.89
ZEB1-221ENST00000561061 WDR90Q96KV7 1748 aa9.46□□□□□ -0.89
ZEB1-221ENST00000561061 HOXB3P14651 431 aaPredicted RBP9.46□□□□□ -0.9
ZEB1-221ENST00000561061 MSL1Q68DK7 614 aa9.46□□□□□ -0.9
ZEB1-221ENST00000561061 COL23A1Q86Y22 540 aaPredicted RBP9.46□□□□□ -0.9
ZEB1-221ENST00000561061 TERF2IPQ9NYB0 399 aa9.46□□□□□ -0.9
ZEB1-221ENST00000561061 MAP3K19Q56UN5 1328 aa9.46□□□□□ -0.9
ZEB1-221ENST00000561061 SNPHO15079 494 aa9.45□□□□□ -0.9
ZEB1-221ENST00000561061 HOXC9P31274 260 aa9.45□□□□□ -0.9
ZEB1-221ENST00000561061 POTEGQ6S5H5 508 aa9.45□□□□□ -0.9
ZEB1-221ENST00000561061 ZCRB1Q8TBF4 217 aaKnown RBP9.45□□□□□ -0.9
ZEB1-221ENST00000561061 USP47Q96K76 1375 aa9.45□□□□□ -0.9
ZEB1-221ENST00000561061 POTEMA6NI47 508 aa9.44□□□□□ -0.9
ZEB1-221ENST00000561061 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
ZEB1-221ENST00000561061 CARD11Q9BXL7 1154 aa9.44□□□□□ -0.9
ZEB1-221ENST00000561061 ZNF831Q5JPB2 1677 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms