RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 FLAD1Q8NFF5 587 aa26.91■■□□□ 1.9
IPO4-215ENST00000560935 COL23A1Q86Y22 540 aaPredicted RBP26.9■■□□□ 1.9
IPO4-215ENST00000560935 COL24A1Q17RW2 1714 aa26.9■■□□□ 1.9
IPO4-215ENST00000560935 POLD1P28340 1107 aa26.89■■□□□ 1.9
IPO4-215ENST00000560935 ARXQ96QS3 562 aa26.89■■□□□ 1.9
IPO4-215ENST00000560935 ZNF831Q5JPB2 1677 aa26.89■■□□□ 1.89
IPO4-215ENST00000560935 UBR3Q6ZT12 1888 aa26.88■■□□□ 1.89
IPO4-215ENST00000560935 LINC00116Q8NCU8 138 aa26.88■■□□□ 1.89
IPO4-215ENST00000560935 VIRMAQ69YN4 1812 aaKnown RBP26.88■■□□□ 1.89
IPO4-215ENST00000560935 ITPK1Q13572 414 aa26.87■■□□□ 1.89
IPO4-215ENST00000560935 MTHFSDQ2M296 383 aaKnown RBP26.87■■□□□ 1.89
IPO4-215ENST00000560935 NFATC2IPQ8NCF5 419 aa26.87■■□□□ 1.89
IPO4-215ENST00000560935 RBM42Q9BTD8 480 aaKnown RBP26.87■■□□□ 1.89
IPO4-215ENST00000560935 NUDCQ9Y266 331 aa26.87■■□□□ 1.89
IPO4-215ENST00000560935 DCAF8L1A6NGE4 600 aa26.85■■□□□ 1.89
IPO4-215ENST00000560935 FHDC1Q9C0D6 1143 aaPredicted RBP26.85■■□□□ 1.89
IPO4-215ENST00000560935 MRC1P22897 1456 aa26.83■■□□□ 1.89
IPO4-215ENST00000560935 RNMTO43148 476 aaKnown RBP26.83■■□□□ 1.89
IPO4-215ENST00000560935 SLC52A2Q9HAB3 445 aa26.83■■□□□ 1.89
IPO4-215ENST00000560935 ADAMTS7Q9UKP4 1686 aa26.82■■□□□ 1.88
IPO4-215ENST00000560935 PHF14O94880 888 aa26.82■■□□□ 1.88
IPO4-215ENST00000560935 SSFA2P28290 1259 aa26.82■■□□□ 1.88
IPO4-215ENST00000560935 GAS2L2Q8NHY3 880 aa26.82■■□□□ 1.88
IPO4-215ENST00000560935 SYT17Q9BSW7 474 aa26.82■■□□□ 1.88
IPO4-215ENST00000560935 LGR6Q9HBX8 967 aa26.82■■□□□ 1.88
IPO4-215ENST00000560935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.81■■□□□ 1.88
IPO4-215ENST00000560935 GNPATO15228 680 aa26.81■■□□□ 1.88
IPO4-215ENST00000560935 SLC4A9Q96Q91 983 aa26.81■■□□□ 1.88
IPO4-215ENST00000560935 COL5A3P25940 1745 aaPredicted RBP26.81■■□□□ 1.88
IPO4-215ENST00000560935 MAP3K5Q99683 1374 aa26.81■■□□□ 1.88
IPO4-215ENST00000560935 PTCD1O75127 700 aaKnown RBP26.79■■□□□ 1.88
IPO4-215ENST00000560935 U2AF1L5P0DN76 240 aaPredicted RBP26.79■■□□□ 1.88
IPO4-215ENST00000560935 U2AF1Q01081 240 aaKnown RBP eCLIP26.79■■□□□ 1.88
IPO4-215ENST00000560935 MSL1Q68DK7 614 aa26.79■■□□□ 1.88
IPO4-215ENST00000560935 AMIGO3Q86WK7 504 aa26.79■■□□□ 1.88
IPO4-215ENST00000560935 PRKAR2BP31323 418 aa26.78■■□□□ 1.88
IPO4-215ENST00000560935 RSPH6AQ9H0K4 717 aa26.78■■□□□ 1.88
IPO4-215ENST00000560935 KLHL34Q8N239 644 aa26.77■■□□□ 1.88
IPO4-215ENST00000560935 GNAT3A8MTJ3 354 aa26.76■■□□□ 1.87
IPO4-215ENST00000560935 RC3H1Q5TC82 1133 aaKnown RBP26.76■■□□□ 1.87
IPO4-215ENST00000560935 CICQ96RK0 1608 aaPredicted RBP26.76■■□□□ 1.87
IPO4-215ENST00000560935 CNTNAP4Q9C0A0 1308 aa26.75■■□□□ 1.87
IPO4-215ENST00000560935 SMIM5Q71RC9 77 aa26.75■■□□□ 1.87
IPO4-215ENST00000560935 RTCBQ9Y3I0 505 aaKnown RBP26.75■■□□□ 1.87
IPO4-215ENST00000560935 TJP1Q07157 1748 aa26.74■■□□□ 1.87
IPO4-215ENST00000560935 DDX10Q13206 875 aaKnown RBP26.74■■□□□ 1.87
IPO4-215ENST00000560935 FCHSD2O94868 740 aa26.73■■□□□ 1.87
IPO4-215ENST00000560935 PHACTR3Q96KR7 559 aa26.73■■□□□ 1.87
IPO4-215ENST00000560935 TEFQ10587 303 aa26.71■■□□□ 1.87
IPO4-215ENST00000560935 SLC39A6Q13433 755 aa26.71■■□□□ 1.87
IPO4-215ENST00000560935 MYH14Q7Z406 1995 aaKnown RBP26.7■■□□□ 1.86
IPO4-215ENST00000560935 ADRA2BP18089 450 aa26.7■■□□□ 1.86
IPO4-215ENST00000560935 RALBP1Q15311 655 aa26.7■■□□□ 1.86
IPO4-215ENST00000560935 TRAPPC3LQ5T215 181 aa26.7■■□□□ 1.86
IPO4-215ENST00000560935 RPS6KA4O75676 772 aa26.69■■□□□ 1.86
IPO4-215ENST00000560935 ZEB1P37275 1124 aaPredicted RBP26.69■■□□□ 1.86
IPO4-215ENST00000560935 IL17REQ8NFR9 667 aa26.69■■□□□ 1.86
IPO4-215ENST00000560935 KCPQ6ZWJ8 1503 aa26.69■■□□□ 1.86
IPO4-215ENST00000560935 CRKLP46109 303 aaKnown RBP26.68■■□□□ 1.86
IPO4-215ENST00000560935 SIPA1L3O60292 1781 aaPredicted RBP26.68■■□□□ 1.86
IPO4-215ENST00000560935 UBR2Q8IWV8 1755 aa26.68■■□□□ 1.86
IPO4-215ENST00000560935 TTC5Q8N0Z6 440 aa26.67■■□□□ 1.86
IPO4-215ENST00000560935 DNAJC10Q8IXB1 793 aa26.66■■□□□ 1.86
IPO4-215ENST00000560935 NEFMP07197 916 aa26.65■■□□□ 1.86
IPO4-215ENST00000560935 ARHGEF1Q92888 912 aaKnown RBP26.65■■□□□ 1.86
IPO4-215ENST00000560935 CEMIPQ8WUJ3 1361 aa26.65■■□□□ 1.86
IPO4-215ENST00000560935 RFC4P35249 363 aa26.64■■□□□ 1.86
IPO4-215ENST00000560935 RTF1Q92541 710 aaKnown RBP26.64■■□□□ 1.86
IPO4-215ENST00000560935 C4AP0C0L4 1744 aa26.64■■□□□ 1.85
IPO4-215ENST00000560935 VSIG10Q8N0Z9 540 aa26.63■■□□□ 1.85
IPO4-215ENST00000560935 NLGN2Q8NFZ4 835 aa26.62■■□□□ 1.85
IPO4-215ENST00000560935 CCDC87Q9NVE4 849 aa26.62■■□□□ 1.85
IPO4-215ENST00000560935 CD2APQ9Y5K6 639 aa26.62■■□□□ 1.85
IPO4-215ENST00000560935 ZNF790Q6PG37 636 aa26.61■■□□□ 1.85
IPO4-215ENST00000560935 CYP19A1P11511 503 aaPredicted RBP26.6■■□□□ 1.85
IPO4-215ENST00000560935 INTS5Q6P9B9 1019 aaKnown RBP26.6■■□□□ 1.85
IPO4-215ENST00000560935 NLGN1Q8N2Q7 840 aa26.6■■□□□ 1.85
IPO4-215ENST00000560935 GPR162Q16538 588 aa26.59■■□□□ 1.85
IPO4-215ENST00000560935 PNNQ9H307 717 aaKnown RBP26.59■■□□□ 1.85
IPO4-215ENST00000560935 MYBBP1AQ9BQG0 1328 aaKnown RBP26.59■■□□□ 1.85
IPO4-215ENST00000560935 HTATSF1O43719 755 aaKnown RBP26.58■■□□□ 1.85
IPO4-215ENST00000560935 MMP10P09238 476 aa26.58■■□□□ 1.85
IPO4-215ENST00000560935 YY1P25490 414 aa26.58■■□□□ 1.85
IPO4-215ENST00000560935 BTBD11A6QL63 1104 aa26.57■■□□□ 1.84
IPO4-215ENST00000560935 GYS1P13807 737 aa26.57■■□□□ 1.84
IPO4-215ENST00000560935 MCM10Q7L590 875 aa26.57■■□□□ 1.84
IPO4-215ENST00000560935 PELP1Q8IZL8 1130 aaKnown RBP26.57■■□□□ 1.84
IPO4-215ENST00000560935 ZNF496Q96IT1 587 aaPredicted RBP26.57■■□□□ 1.84
IPO4-215ENST00000560935 HEG1Q9ULI3 1381 aa26.57■■□□□ 1.84
IPO4-215ENST00000560935 SOS1Q07889 1333 aaPredicted RBP26.56■■□□□ 1.84
IPO4-215ENST00000560935 DLG5Q8TDM6 1919 aa26.55■■□□□ 1.84
IPO4-215ENST00000560935 STARD3NLO95772 234 aa26.55■■□□□ 1.84
IPO4-215ENST00000560935 FMNL2Q96PY5 1086 aa26.55■■□□□ 1.84
IPO4-215ENST00000560935 USP42Q9H9J4 1324 aaKnown RBP26.55■■□□□ 1.84
IPO4-215ENST00000560935 MAPK8IP3Q9UPT6 1336 aa26.55■■□□□ 1.84
IPO4-215ENST00000560935 PLEKHF1Q96S99 279 aa26.54■■□□□ 1.84
IPO4-215ENST00000560935 TEX13AQ9BXU3 409 aaPredicted RBP26.54■■□□□ 1.84
IPO4-215ENST00000560935 ZBTB1Q9Y2K1 713 aa26.54■■□□□ 1.84
IPO4-215ENST00000560935 DCTN1Q14203 1278 aa26.53■■□□□ 1.84
IPO4-215ENST00000560935 SRP68Q9UHB9 627 aaKnown RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms