RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 IFNL2Q8IZJ0 200 aa26.36■■□□□ 1.81
CRNDE-210ENST00000560912 BRCA1P38398 1863 aaKnown RBP26.36■■□□□ 1.81
CRNDE-210ENST00000560912 GNPATO15228 680 aa26.34■■□□□ 1.81
CRNDE-210ENST00000560912 GPBP1L1Q9HC44 474 aaPredicted RBP26.34■■□□□ 1.81
CRNDE-210ENST00000560912 MYH14Q7Z406 1995 aaKnown RBP26.33■■□□□ 1.81
CRNDE-210ENST00000560912 EIF4A2Q14240 407 aaKnown RBP26.33■■□□□ 1.81
CRNDE-210ENST00000560912 ATG3Q9NT62 314 aa26.33■■□□□ 1.81
CRNDE-210ENST00000560912 PXDNLA1KZ92 1463 aa26.32■■□□□ 1.8
CRNDE-210ENST00000560912 ATP6V1AP38606 617 aa26.32■■□□□ 1.8
CRNDE-210ENST00000560912 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
CRNDE-210ENST00000560912 TIMELESSQ9UNS1 1208 aa26.31■■□□□ 1.8
CRNDE-210ENST00000560912 WWC3Q9ULE0 1092 aa26.3■■□□□ 1.8
CRNDE-210ENST00000560912 C10orf71Q711Q0 1435 aa26.29■■□□□ 1.8
CRNDE-210ENST00000560912 KDM6AO15550 1401 aaPredicted RBP26.28■■□□□ 1.8
CRNDE-210ENST00000560912 MMP10P09238 476 aa26.27■■□□□ 1.8
CRNDE-210ENST00000560912 SLC4A9Q96Q91 983 aa26.27■■□□□ 1.8
CRNDE-210ENST00000560912 ARFGEF1Q9Y6D6 1849 aa26.26■■□□□ 1.79
CRNDE-210ENST00000560912 ZNF526Q8TF50 670 aaPredicted RBP26.26■■□□□ 1.79
CRNDE-210ENST00000560912 TJP1Q07157 1748 aa26.25■■□□□ 1.79
CRNDE-210ENST00000560912 ERVV-2B6SEH9 535 aa26.25■■□□□ 1.79
CRNDE-210ENST00000560912 SCN11AQ9UI33 1791 aa26.25■■□□□ 1.79
CRNDE-210ENST00000560912 TNNT2P45379 298 aaPredicted RBP26.24■■□□□ 1.79
CRNDE-210ENST00000560912 CNTNAP4Q9C0A0 1308 aa26.23■■□□□ 1.79
CRNDE-210ENST00000560912 RTCBQ9Y3I0 505 aaKnown RBP26.23■■□□□ 1.79
CRNDE-210ENST00000560912 VIRMAQ69YN4 1812 aaKnown RBP26.23■■□□□ 1.79
CRNDE-210ENST00000560912 HSPA6P17066 643 aa26.22■■□□□ 1.79
CRNDE-210ENST00000560912 ADRA2BP18089 450 aa26.22■■□□□ 1.79
CRNDE-210ENST00000560912 RC3H1Q5TC82 1133 aaKnown RBP26.22■■□□□ 1.79
CRNDE-210ENST00000560912 DCAF5Q96JK2 942 aa26.22■■□□□ 1.79
CRNDE-210ENST00000560912 HSP90AB1P08238 724 aaKnown RBP26.21■■□□□ 1.79
CRNDE-210ENST00000560912 ADAMTS7Q9UKP4 1686 aa26.21■■□□□ 1.79
CRNDE-210ENST00000560912 CLSPNQ9HAW4 1339 aa26.2■■□□□ 1.79
CRNDE-210ENST00000560912 KIF3CO14782 793 aa26.2■■□□□ 1.78
CRNDE-210ENST00000560912 TRAPPC3LQ5T215 181 aa26.2■■□□□ 1.78
CRNDE-210ENST00000560912 TGFB2P61812 414 aa26.19■■□□□ 1.78
CRNDE-210ENST00000560912 NLGN1Q8N2Q7 840 aa26.19■■□□□ 1.78
CRNDE-210ENST00000560912 POLR3GLQ9BT43 218 aa26.19■■□□□ 1.78
CRNDE-210ENST00000560912 ARHGEF1Q92888 912 aaKnown RBP26.18■■□□□ 1.78
CRNDE-210ENST00000560912 RBM42Q9BTD8 480 aaKnown RBP26.18■■□□□ 1.78
CRNDE-210ENST00000560912 RPS6KA4O75676 772 aa26.17■■□□□ 1.78
CRNDE-210ENST00000560912 GYS1P13807 737 aa26.17■■□□□ 1.78
CRNDE-210ENST00000560912 PLEKHO1Q53GL0 409 aaPredicted RBP26.17■■□□□ 1.78
CRNDE-210ENST00000560912 IFFO2Q5TF58 517 aa26.17■■□□□ 1.78
CRNDE-210ENST00000560912 ZNF530Q6P9A1 599 aaPredicted RBP26.17■■□□□ 1.78
CRNDE-210ENST00000560912 AMOTQ4VCS5 1084 aa26.16■■□□□ 1.78
CRNDE-210ENST00000560912 PANK3Q9H999 370 aa26.14■■□□□ 1.78
CRNDE-210ENST00000560912 CCDC87Q9NVE4 849 aa26.14■■□□□ 1.78
CRNDE-210ENST00000560912 A0A0G2JLW4 131 aa26.13■■□□□ 1.77
CRNDE-210ENST00000560912 CABP4P57796 275 aa26.13■■□□□ 1.77
CRNDE-210ENST00000560912 AEBP1Q8IUX7 1158 aa26.13■■□□□ 1.77
CRNDE-210ENST00000560912 BCS1LQ9Y276 419 aa26.13■■□□□ 1.77
CRNDE-210ENST00000560912 RFC4P35249 363 aa26.12■■□□□ 1.77
CRNDE-210ENST00000560912 DPEP1P16444 411 aa26.11■■□□□ 1.77
CRNDE-210ENST00000560912 HSPA5P11021 654 aaKnown RBP26.1■■□□□ 1.77
CRNDE-210ENST00000560912 EIF4G2P78344 907 aaKnown RBP eCLIP26.1■■□□□ 1.77
CRNDE-210ENST00000560912 PARP3Q9Y6F1 533 aa26.1■■□□□ 1.77
CRNDE-210ENST00000560912 SBF1O95248 1867 aa26.1■■□□□ 1.77
CRNDE-210ENST00000560912 MTHFSP49914 203 aa26.09■■□□□ 1.77
CRNDE-210ENST00000560912 MRC1P22897 1456 aa26.09■■□□□ 1.77
CRNDE-210ENST00000560912 CRKLP46109 303 aaKnown RBP26.08■■□□□ 1.77
CRNDE-210ENST00000560912 C1orf141Q5JVX7 400 aa26.08■■□□□ 1.77
CRNDE-210ENST00000560912 AFDNP55196 1824 aaKnown RBP26.08■■□□□ 1.77
CRNDE-210ENST00000560912 USP42Q9H9J4 1324 aaKnown RBP26.08■■□□□ 1.77
CRNDE-210ENST00000560912 PTCD1O75127 700 aaKnown RBP26.07■■□□□ 1.76
CRNDE-210ENST00000560912 KCNA3P22001 575 aa26.07■■□□□ 1.76
CRNDE-210ENST00000560912 WDR90Q96KV7 1748 aa26.07■■□□□ 1.76
CRNDE-210ENST00000560912 NRXN2Q9P2S2 1712 aa26.06■■□□□ 1.76
CRNDE-210ENST00000560912 DLEC1Q9Y238 1755 aa26.06■■□□□ 1.76
CRNDE-210ENST00000560912 NFATC2IPQ8NCF5 419 aa26.06■■□□□ 1.76
CRNDE-210ENST00000560912 FCHSD2O94868 740 aa26.05■■□□□ 1.76
CRNDE-210ENST00000560912 ARHGAP27Q6ZUM4 889 aa26.05■■□□□ 1.76
CRNDE-210ENST00000560912 MORC1Q86VD1 984 aa26.05■■□□□ 1.76
CRNDE-210ENST00000560912 DDR1Q08345 913 aa26.04■■□□□ 1.76
CRNDE-210ENST00000560912 SULT6B1Q6IMI4 303 aa26.04■■□□□ 1.76
CRNDE-210ENST00000560912 SRP68Q9UHB9 627 aaKnown RBP26.04■■□□□ 1.76
CRNDE-210ENST00000560912 UBR2Q8IWV8 1755 aa26.04■■□□□ 1.76
CRNDE-210ENST00000560912 TNRC6CQ9HCJ0 1690 aaKnown RBP26.03■■□□□ 1.76
CRNDE-210ENST00000560912 TOMM70O94826 608 aa26.03■■□□□ 1.76
CRNDE-210ENST00000560912 IL13P35225 146 aa26.03■■□□□ 1.76
CRNDE-210ENST00000560912 FKBP8Q14318 412 aa26.03■■□□□ 1.76
CRNDE-210ENST00000560912 KCPQ6ZWJ8 1503 aa26.02■■□□□ 1.76
CRNDE-210ENST00000560912 INTS5Q6P9B9 1019 aaKnown RBP26.01■■□□□ 1.75
CRNDE-210ENST00000560912 NMRK2Q9NPI5 230 aa26.01■■□□□ 1.75
CRNDE-210ENST00000560912 APLP1P51693 650 aa26■■□□□ 1.75
CRNDE-210ENST00000560912 PIM2Q9P1W9 311 aa26■■□□□ 1.75
CRNDE-210ENST00000560912 AKAP4Q5JQC9 854 aa25.98■■□□□ 1.75
CRNDE-210ENST00000560912 C9orf131Q5VYM1 1079 aa25.98■■□□□ 1.75
CRNDE-210ENST00000560912 PCGF6Q9BYE7 350 aa25.98■■□□□ 1.75
CRNDE-210ENST00000560912 POLRMTO00411 1230 aaKnown RBP25.97■■□□□ 1.75
CRNDE-210ENST00000560912 SLC52A2Q9HAB3 445 aa25.97■■□□□ 1.75
CRNDE-210ENST00000560912 SOS1Q07889 1333 aaPredicted RBP25.96■■□□□ 1.75
CRNDE-210ENST00000560912 TM4SF1P30408 202 aa25.96■■□□□ 1.75
CRNDE-210ENST00000560912 DALRD3Q5D0E6 543 aaKnown RBP25.96■■□□□ 1.75
CRNDE-210ENST00000560912 KNSTRNQ9Y448 316 aa25.96■■□□□ 1.75
CRNDE-210ENST00000560912 AMER1Q5JTC6 1135 aaPredicted RBP25.95■■□□□ 1.74
CRNDE-210ENST00000560912 DNAJC10Q8IXB1 793 aa25.95■■□□□ 1.74
CRNDE-210ENST00000560912 CCDC88AQ3V6T2 1871 aa25.94■■□□□ 1.74
CRNDE-210ENST00000560912 DNAJC5GQ8N7S2 189 aa25.94■■□□□ 1.74
CRNDE-210ENST00000560912 RBM46Q8TBY0 533 aaKnown RBP25.94■■□□□ 1.74
CRNDE-210ENST00000560912 TIAM2Q8IVF5 1701 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms