RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 MTFR1Q15390 333 aa9.65□□□□□ -0.86
HMG20A-211ENST00000560867 TMEM164Q5U3C3 297 aa9.65□□□□□ -0.86
HMG20A-211ENST00000560867 CLP1Q92989 425 aaKnown RBP9.65□□□□□ -0.86
HMG20A-211ENST00000560867 CNKSR1Q969H4 720 aa9.65□□□□□ -0.86
HMG20A-211ENST00000560867 NLRP3Q96P20 1036 aa9.65□□□□□ -0.86
HMG20A-211ENST00000560867 TRAIPQ9BWF2 469 aa9.65□□□□□ -0.86
HMG20A-211ENST00000560867 TMEM88BA6NKF7 163 aa9.64□□□□□ -0.87
HMG20A-211ENST00000560867 IL2RAP01589 272 aa9.64□□□□□ -0.87
HMG20A-211ENST00000560867 RELBQ01201 579 aa9.64□□□□□ -0.87
HMG20A-211ENST00000560867 STK32AQ8WU08 396 aa9.64□□□□□ -0.87
HMG20A-211ENST00000560867 RNF144AP50876 292 aaPredicted RBP9.63□□□□□ -0.87
HMG20A-211ENST00000560867 SMTNP53814 917 aa9.63□□□□□ -0.87
HMG20A-211ENST00000560867 BMP2P12643 396 aa9.62□□□□□ -0.87
HMG20A-211ENST00000560867 EPHA4P54764 986 aa9.62□□□□□ -0.87
HMG20A-211ENST00000560867 FAM69CQ0P6D2 419 aa9.62□□□□□ -0.87
HMG20A-211ENST00000560867 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.62□□□□□ -0.87
HMG20A-211ENST00000560867 AGBL1Q96MI9 1066 aa9.62□□□□□ -0.87
HMG20A-211ENST00000560867 AAASQ9NRG9 546 aa9.62□□□□□ -0.87
HMG20A-211ENST00000560867 A6NJY4 79 aa9.61□□□□□ -0.87
HMG20A-211ENST00000560867 SFI1A8K8P3 1242 aa9.61□□□□□ -0.87
HMG20A-211ENST00000560867 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
HMG20A-211ENST00000560867 GTF2E1P29083 439 aaPredicted RBP9.61□□□□□ -0.87
HMG20A-211ENST00000560867 TLR1Q15399 786 aa9.61□□□□□ -0.87
HMG20A-211ENST00000560867 PATL2C9JE40 543 aaKnown RBP9.6□□□□□ -0.87
HMG20A-211ENST00000560867 MEN1O00255 615 aa9.6□□□□□ -0.87
HMG20A-211ENST00000560867 PDIA4P13667 645 aaKnown RBP9.6□□□□□ -0.87
HMG20A-211ENST00000560867 IGFBP4P22692 258 aa9.6□□□□□ -0.87
HMG20A-211ENST00000560867 FOXK2Q01167 660 aa9.6□□□□□ -0.87
HMG20A-211ENST00000560867 WDR44Q5JSH3 913 aa9.6□□□□□ -0.87
HMG20A-211ENST00000560867 STAG2Q8N3U4 1231 aa9.6□□□□□ -0.87
HMG20A-211ENST00000560867 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
HMG20A-211ENST00000560867 FHDC1Q9C0D6 1143 aaPredicted RBP9.6□□□□□ -0.87
HMG20A-211ENST00000560867 SENP2Q9HC62 589 aa9.6□□□□□ -0.87
HMG20A-211ENST00000560867 RAB6BQ9NRW1 208 aa9.6□□□□□ -0.87
HMG20A-211ENST00000560867 SCHIP1Q9P0W5 487 aaPredicted RBP9.6□□□□□ -0.87
HMG20A-211ENST00000560867 CENPCQ03188 943 aa9.59□□□□□ -0.87
HMG20A-211ENST00000560867 TRIM46Q7Z4K8 759 aa9.59□□□□□ -0.87
HMG20A-211ENST00000560867 C1orf216Q8TAB5 229 aa9.59□□□□□ -0.87
HMG20A-211ENST00000560867 ZNF395Q9H8N7 513 aaPredicted RBP9.59□□□□□ -0.87
HMG20A-211ENST00000560867 ATP13A2Q9NQ11 1180 aa9.59□□□□□ -0.87
HMG20A-211ENST00000560867 SPATA31C2B4DYI2 1134 aa9.58□□□□□ -0.88
HMG20A-211ENST00000560867 FOXO3O43524 673 aa9.58□□□□□ -0.88
HMG20A-211ENST00000560867 PPARGC1BQ86YN6 1023 aaKnown RBP9.58□□□□□ -0.88
HMG20A-211ENST00000560867 TSEN2Q8NCE0 465 aaKnown RBP9.58□□□□□ -0.88
HMG20A-211ENST00000560867 ZSCAN10Q96SZ4 725 aaPredicted RBP9.58□□□□□ -0.88
HMG20A-211ENST00000560867 GRIP2Q9C0E4 1043 aa9.58□□□□□ -0.88
HMG20A-211ENST00000560867 POLMQ9NP87 494 aaPredicted RBP9.58□□□□□ -0.88
HMG20A-211ENST00000560867 BRD1O95696 1058 aa9.57□□□□□ -0.88
HMG20A-211ENST00000560867 WEE1P30291 646 aa9.57□□□□□ -0.88
HMG20A-211ENST00000560867 PSMA6P60900 246 aaKnown RBP9.57□□□□□ -0.88
HMG20A-211ENST00000560867 POTEAQ6S8J7 498 aa9.57□□□□□ -0.88
HMG20A-211ENST00000560867 RHBDD1Q8TEB9 315 aa9.57□□□□□ -0.88
HMG20A-211ENST00000560867 INSM2Q96T92 566 aaPredicted RBP9.57□□□□□ -0.88
HMG20A-211ENST00000560867 IQSEC3Q9UPP2 1182 aaPredicted RBP9.57□□□□□ -0.88
HMG20A-211ENST00000560867 CHMP3Q9Y3E7 222 aa9.57□□□□□ -0.88
HMG20A-211ENST00000560867 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
HMG20A-211ENST00000560867 TTLL8A6PVC2 850 aa9.56□□□□□ -0.88
HMG20A-211ENST00000560867 BMP1P13497 986 aa9.56□□□□□ -0.88
HMG20A-211ENST00000560867 GNASQ5JWF2 1037 aa9.56□□□□□ -0.88
HMG20A-211ENST00000560867 SLC27A3Q5K4L6 730 aa9.56□□□□□ -0.88
HMG20A-211ENST00000560867 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
HMG20A-211ENST00000560867 COL26A1Q96A83 441 aa9.56□□□□□ -0.88
HMG20A-211ENST00000560867 PURBQ96QR8 312 aaKnown RBP9.56□□□□□ -0.88
HMG20A-211ENST00000560867 HINFPQ9BQA5 517 aa9.56□□□□□ -0.88
HMG20A-211ENST00000560867 SERTAD1Q9UHV2 236 aa9.56□□□□□ -0.88
HMG20A-211ENST00000560867 HIRAP54198 1017 aaPredicted RBP9.55□□□□□ -0.88
HMG20A-211ENST00000560867 OCLNQ16625 522 aa9.55□□□□□ -0.88
HMG20A-211ENST00000560867 C6orf118Q5T5N4 469 aa9.55□□□□□ -0.88
HMG20A-211ENST00000560867 Q6ZNB5 142 aa9.55□□□□□ -0.88
HMG20A-211ENST00000560867 KCTD17Q8N5Z5 321 aa9.55□□□□□ -0.88
HMG20A-211ENST00000560867 RNF217Q8TC41 542 aa9.55□□□□□ -0.88
HMG20A-211ENST00000560867 ZFP42Q96MM3 310 aa9.55□□□□□ -0.88
HMG20A-211ENST00000560867 CXXC1Q9P0U4 656 aaPredicted RBP9.55□□□□□ -0.88
HMG20A-211ENST00000560867 ST8SIA5O15466 376 aa9.54□□□□□ -0.88
HMG20A-211ENST00000560867 ATP2B4P23634 1241 aa9.54□□□□□ -0.88
HMG20A-211ENST00000560867 SSFA2P28290 1259 aa9.54□□□□□ -0.88
HMG20A-211ENST00000560867 CTSOP43234 321 aaPredicted RBP9.54□□□□□ -0.88
HMG20A-211ENST00000560867 TEAD4Q15561 434 aa9.54□□□□□ -0.88
HMG20A-211ENST00000560867 TMEM214Q6NUQ4 689 aaKnown RBP9.54□□□□□ -0.88
HMG20A-211ENST00000560867 LYSMD3Q7Z3D4 306 aa9.54□□□□□ -0.88
HMG20A-211ENST00000560867 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
HMG20A-211ENST00000560867 TNS4Q8IZW8 715 aa9.54□□□□□ -0.88
HMG20A-211ENST00000560867 NIFKQ9BYG3 293 aaKnown RBP9.54□□□□□ -0.88
HMG20A-211ENST00000560867 PTCD1O75127 700 aaKnown RBP9.53□□□□□ -0.88
HMG20A-211ENST00000560867 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
HMG20A-211ENST00000560867 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.53□□□□□ -0.88
HMG20A-211ENST00000560867 TSPAN10Q9H1Z9 355 aaPredicted RBP9.53□□□□□ -0.88
HMG20A-211ENST00000560867 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.53□□□□□ -0.88
HMG20A-211ENST00000560867 MTMR7Q9Y216 660 aa9.53□□□□□ -0.88
HMG20A-211ENST00000560867 KCNA1Q09470 495 aa9.52□□□□□ -0.89
HMG20A-211ENST00000560867 TAS1R3Q7RTX0 852 aa9.52□□□□□ -0.89
HMG20A-211ENST00000560867 ZNF295-AS1Q8N0V1 137 aa9.52□□□□□ -0.89
HMG20A-211ENST00000560867 TRIM47Q96LD4 638 aa9.52□□□□□ -0.89
HMG20A-211ENST00000560867 ATAD2Q6PL18 1390 aa9.51□□□□□ -0.89
HMG20A-211ENST00000560867 PPP1R12BO60237 982 aaPredicted RBP9.51□□□□□ -0.89
HMG20A-211ENST00000560867 GPC6Q9Y625 555 aaPredicted RBP9.51□□□□□ -0.89
HMG20A-211ENST00000560867 SCG3Q8WXD2 468 aaKnown RBP9.5□□□□□ -0.89
HMG20A-211ENST00000560867 ZDHHC3Q9NYG2 299 aa9.5□□□□□ -0.89
HMG20A-211ENST00000560867 SERTM1A2A2V5 107 aa9.49□□□□□ -0.89
HMG20A-211ENST00000560867 C21orf2O43822 256 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms