RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 NGEFQ8N5V2 710 aa10.6□□□□□ -0.71
CPNE6-218ENST00000560845 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
CPNE6-218ENST00000560845 MAPK8IP3Q9UPT6 1336 aa10.59□□□□□ -0.71
CPNE6-218ENST00000560845 EIF4A2Q14240 407 aaKnown RBP10.59□□□□□ -0.71
CPNE6-218ENST00000560845 NBPF6Q5VWK0 638 aa10.59□□□□□ -0.71
CPNE6-218ENST00000560845 NBPF4Q96M43 638 aa10.59□□□□□ -0.71
CPNE6-218ENST00000560845 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
CPNE6-218ENST00000560845 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
CPNE6-218ENST00000560845 HSP90AB2PQ58FF8 381 aa10.58□□□□□ -0.72
CPNE6-218ENST00000560845 USHBP1Q8N6Y0 703 aa10.58□□□□□ -0.72
CPNE6-218ENST00000560845 RAPGEF4Q8WZA2 1011 aa10.58□□□□□ -0.72
CPNE6-218ENST00000560845 RSPH6AQ9H0K4 717 aa10.58□□□□□ -0.72
CPNE6-218ENST00000560845 PALLDQ8WX93 1383 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 FCHSD2O94868 740 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 NEFMP07197 916 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 PRKAR2BP31323 418 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 CD2APQ9Y5K6 639 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 RGPD2P0DJD1 1756 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 ZNF521Q96K83 1311 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 PCDH11XQ9BZA7 1347 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 PCDH11YQ9BZA8 1340 aa10.57□□□□□ -0.72
CPNE6-218ENST00000560845 ADCY9O60503 1353 aa10.56□□□□□ -0.72
CPNE6-218ENST00000560845 HMOX1P09601 288 aa10.56□□□□□ -0.72
CPNE6-218ENST00000560845 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
CPNE6-218ENST00000560845 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
CPNE6-218ENST00000560845 PLEKHF1Q96S99 279 aa10.56□□□□□ -0.72
CPNE6-218ENST00000560845 C5P01031 1676 aa10.56□□□□□ -0.72
CPNE6-218ENST00000560845 HMGB2P26583 209 aaKnown RBP10.55□□□□□ -0.72
CPNE6-218ENST00000560845 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
CPNE6-218ENST00000560845 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
CPNE6-218ENST00000560845 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
CPNE6-218ENST00000560845 MPRIPQ6WCQ1 1025 aa10.54□□□□□ -0.72
CPNE6-218ENST00000560845 AEBP1Q8IUX7 1158 aa10.54□□□□□ -0.72
CPNE6-218ENST00000560845 AK7Q96M32 723 aa10.54□□□□□ -0.72
CPNE6-218ENST00000560845 GPBP1L1Q9HC44 474 aaPredicted RBP10.54□□□□□ -0.72
CPNE6-218ENST00000560845 KDRP35968 1356 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 CYP27B1O15528 508 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
CPNE6-218ENST00000560845 GOLGA2Q08379 1002 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 NEUROD2Q15784 382 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 CCDC27Q2M243 656 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 SULT6B1Q6IMI4 303 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 AMIGO3Q86WK7 504 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 SMARCC1Q92922 1105 aaPredicted RBP10.53□□□□□ -0.72
CPNE6-218ENST00000560845 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 C4BP0C0L5 1744 aa10.53□□□□□ -0.72
CPNE6-218ENST00000560845 PHF14O94880 888 aa10.52□□□□□ -0.73
CPNE6-218ENST00000560845 NFE2L2Q16236 605 aa10.52□□□□□ -0.73
CPNE6-218ENST00000560845 WWC1Q8IX03 1113 aa10.52□□□□□ -0.73
CPNE6-218ENST00000560845 ZNF526Q8TF50 670 aaPredicted RBP10.52□□□□□ -0.73
CPNE6-218ENST00000560845 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
CPNE6-218ENST00000560845 EYA1Q99502 592 aa10.52□□□□□ -0.73
CPNE6-218ENST00000560845 TOGARAM1Q9Y4F4 1720 aa10.52□□□□□ -0.73
CPNE6-218ENST00000560845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.51□□□□□ -0.73
CPNE6-218ENST00000560845 E9PSI1 815 aa10.51□□□□□ -0.73
CPNE6-218ENST00000560845 NEFLP07196 543 aa10.51□□□□□ -0.73
CPNE6-218ENST00000560845 HSPA6P17066 643 aa10.51□□□□□ -0.73
CPNE6-218ENST00000560845 WWC3Q9ULE0 1092 aa10.51□□□□□ -0.73
CPNE6-218ENST00000560845 NCAPD2Q15021 1401 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 TAF1LQ8IZX4 1826 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 SSFA2P28290 1259 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 RIPK4P57078 832 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 SLFN5Q08AF3 891 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 SMIM5Q71RC9 77 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 WDR63Q8IWG1 891 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 PIGBQ92521 554 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 PHACTR3Q96KR7 559 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 PKD1L3Q7Z443 1732 aa10.5□□□□□ -0.73
CPNE6-218ENST00000560845 LOC102724428A0A0B4J2F2 783 aa10.49□□□□□ -0.73
CPNE6-218ENST00000560845 SIK1P57059 783 aa10.49□□□□□ -0.73
CPNE6-218ENST00000560845 LINC00116Q8NCU8 138 aa10.49□□□□□ -0.73
CPNE6-218ENST00000560845 NKX1-1Q15270 411 aaPredicted RBP10.48□□□□□ -0.73
CPNE6-218ENST00000560845 DUSP27Q5VZP5 1158 aa10.48□□□□□ -0.73
CPNE6-218ENST00000560845 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
CPNE6-218ENST00000560845 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
CPNE6-218ENST00000560845 RNF123Q5XPI4 1314 aa10.48□□□□□ -0.73
CPNE6-218ENST00000560845 UBR3Q6ZT12 1888 aa10.48□□□□□ -0.73
CPNE6-218ENST00000560845 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
CPNE6-218ENST00000560845 KIF3CO14782 793 aa10.47□□□□□ -0.73
CPNE6-218ENST00000560845 GNPATO15228 680 aa10.47□□□□□ -0.73
CPNE6-218ENST00000560845 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
CPNE6-218ENST00000560845 GAS2L2Q8NHY3 880 aa10.47□□□□□ -0.73
CPNE6-218ENST00000560845 MYH16Q9H6N6 1097 aa10.47□□□□□ -0.73
CPNE6-218ENST00000560845 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
CPNE6-218ENST00000560845 TMOD3Q9NYL9 352 aa10.47□□□□□ -0.73
CPNE6-218ENST00000560845 IL16Q14005 1332 aa10.47□□□□□ -0.73
CPNE6-218ENST00000560845 ITGB4P16144 1822 aa10.47□□□□□ -0.73
CPNE6-218ENST00000560845 ITPK1Q13572 414 aa10.46□□□□□ -0.73
CPNE6-218ENST00000560845 TRMT2AQ8IZ69 625 aaKnown RBP10.46□□□□□ -0.73
CPNE6-218ENST00000560845 RCAN3Q9UKA8 241 aa10.46□□□□□ -0.73
CPNE6-218ENST00000560845 ASAP1Q9ULH1 1129 aa10.46□□□□□ -0.73
CPNE6-218ENST00000560845 PXDNLA1KZ92 1463 aa10.46□□□□□ -0.74
CPNE6-218ENST00000560845 MMP10P09238 476 aa10.45□□□□□ -0.74
CPNE6-218ENST00000560845 ATP6V1AP38606 617 aa10.45□□□□□ -0.74
CPNE6-218ENST00000560845 IRX6P78412 446 aaPredicted RBP10.45□□□□□ -0.74
CPNE6-218ENST00000560845 ERICH6BQ5W0A0 696 aa10.45□□□□□ -0.74
CPNE6-218ENST00000560845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
CPNE6-218ENST00000560845 FANCIQ9NVI1 1328 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms