RNA–Protein interactions for RNA: ENST00000560783.1

LINS1-209, Transcript of lines homolog 1, humanhuman

TSL 5

Gene LINS1, Length 511 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-209ENST00000560783 ATP13A2Q9NQ11 1180 aa8.5□□□□□ -1.05
LINS1-209ENST00000560783 PCDHB9Q9Y5E1 797 aa8.5□□□□□ -1.05
LINS1-209ENST00000560783 ZIC2O95409 532 aaPredicted RBP8.49□□□□□ -1.05
LINS1-209ENST00000560783 NBPF20Q3BBV1 942 aa8.49□□□□□ -1.05
LINS1-209ENST00000560783 PPP1R26Q5T8A7 1209 aaPredicted RBP8.49□□□□□ -1.05
LINS1-209ENST00000560783 TRIM46Q7Z4K8 759 aa8.49□□□□□ -1.05
LINS1-209ENST00000560783 ABL2P42684 1182 aa8.48□□□□□ -1.05
LINS1-209ENST00000560783 MCCD1P59942 119 aaPredicted RBP8.48□□□□□ -1.05
LINS1-209ENST00000560783 TRAPPC8Q9Y2L5 1435 aa8.47□□□□□ -1.05
LINS1-209ENST00000560783 GIGYF1O75420 1035 aaPredicted RBP8.47□□□□□ -1.05
LINS1-209ENST00000560783 TRIM26Q12899 539 aaPredicted RBP8.47□□□□□ -1.05
LINS1-209ENST00000560783 NEUROD1Q13562 356 aa8.47□□□□□ -1.05
LINS1-209ENST00000560783 GMPR2Q9P2T1 348 aaKnown RBP8.47□□□□□ -1.05
LINS1-209ENST00000560783 EMILIN1Q9Y6C2 1016 aa8.47□□□□□ -1.05
LINS1-209ENST00000560783 UGGT2Q9NYU1 1516 aa8.47□□□□□ -1.05
LINS1-209ENST00000560783 C3P01024 1663 aa8.46□□□□□ -1.05
LINS1-209ENST00000560783 PLA2R1Q13018 1463 aa8.46□□□□□ -1.05
LINS1-209ENST00000560783 DHX9Q08211 1270 aaKnown RBP8.46□□□□□ -1.06
LINS1-209ENST00000560783 VAC14Q08AM6 782 aa8.46□□□□□ -1.06
LINS1-209ENST00000560783 SEPT12Q8IYM1 358 aa8.46□□□□□ -1.06
LINS1-209ENST00000560783 BCL11AQ9H165 835 aa8.46□□□□□ -1.06
LINS1-209ENST00000560783 ABCA8O94911 1581 aa8.46□□□□□ -1.06
LINS1-209ENST00000560783 C9orf84Q5VXU9 1444 aa8.46□□□□□ -1.06
LINS1-209ENST00000560783 CFAP74Q9C0B2 1584 aa8.45□□□□□ -1.06
LINS1-209ENST00000560783 ALKQ9UM73 1620 aa8.45□□□□□ -1.06
LINS1-209ENST00000560783 ERVH48-1M5A8F1 160 aa8.45□□□□□ -1.06
LINS1-209ENST00000560783 BMP1P13497 986 aa8.45□□□□□ -1.06
LINS1-209ENST00000560783 ZNF787Q6DD87 383 aa8.45□□□□□ -1.06
LINS1-209ENST00000560783 ZNF330Q9Y3S2 320 aaPredicted RBP8.45□□□□□ -1.06
LINS1-209ENST00000560783 UBTFP17480 764 aaKnown RBP8.44□□□□□ -1.06
LINS1-209ENST00000560783 WASHC4Q2M389 1173 aa8.44□□□□□ -1.06
LINS1-209ENST00000560783 Q6ZVU0 165 aa8.44□□□□□ -1.06
LINS1-209ENST00000560783 MEIOBQ8N635 442 aa8.44□□□□□ -1.06
LINS1-209ENST00000560783 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
LINS1-209ENST00000560783 CEP126Q9P2H0 1117 aa8.44□□□□□ -1.06
LINS1-209ENST00000560783 IGF1RP08069 1367 aa8.44□□□□□ -1.06
LINS1-209ENST00000560783 LILRA1O75019 489 aa8.43□□□□□ -1.06
LINS1-209ENST00000560783 MRPL14Q6P1L8 145 aaKnown RBP8.43□□□□□ -1.06
LINS1-209ENST00000560783 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
LINS1-209ENST00000560783 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
LINS1-209ENST00000560783 ATP10AO60312 1499 aa8.43□□□□□ -1.06
LINS1-209ENST00000560783 TCOF1Q13428 1488 aaKnown RBP8.43□□□□□ -1.06
LINS1-209ENST00000560783 HECW1Q76N89 1606 aa8.43□□□□□ -1.06
LINS1-209ENST00000560783 RAB15P59190 212 aa8.42□□□□□ -1.06
LINS1-209ENST00000560783 EIF4G2P78344 907 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINS1-209ENST00000560783 CBLBQ13191 982 aa8.42□□□□□ -1.06
LINS1-209ENST00000560783 PHTF2Q8N3S3 785 aa8.42□□□□□ -1.06
LINS1-209ENST00000560783 ZNF784Q8NCA9 323 aaPredicted RBP8.42□□□□□ -1.06
LINS1-209ENST00000560783 TRIM47Q96LD4 638 aa8.42□□□□□ -1.06
LINS1-209ENST00000560783 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
LINS1-209ENST00000560783 CCDC125Q86Z20 511 aa8.41□□□□□ -1.06
LINS1-209ENST00000560783 FNBP4Q8N3X1 1017 aaPredicted RBP8.41□□□□□ -1.06
LINS1-209ENST00000560783 ZFP42Q96MM3 310 aa8.41□□□□□ -1.06
LINS1-209ENST00000560783 SENP2Q9HC62 589 aa8.41□□□□□ -1.06
LINS1-209ENST00000560783 GTF3C3Q9Y5Q9 886 aa8.41□□□□□ -1.06
LINS1-209ENST00000560783 SHANK2Q9UPX8 1470 aa8.4□□□□□ -1.06
LINS1-209ENST00000560783 RAPGEF2Q9Y4G8 1499 aa8.4□□□□□ -1.06
LINS1-209ENST00000560783 RAD21O60216 631 aa8.4□□□□□ -1.06
LINS1-209ENST00000560783 SNRPBP14678 240 aaKnown RBP8.4□□□□□ -1.06
LINS1-209ENST00000560783 ADD1P35611 737 aaKnown RBP8.4□□□□□ -1.06
LINS1-209ENST00000560783 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
LINS1-209ENST00000560783 CLUAP1Q96AJ1 413 aa8.4□□□□□ -1.06
LINS1-209ENST00000560783 ZNF142P52746 1687 aaPredicted RBP8.4□□□□□ -1.07
LINS1-209ENST00000560783 RNF17Q9BXT8 1623 aaKnown RBP8.4□□□□□ -1.07
LINS1-209ENST00000560783 NPATQ14207 1427 aa8.39□□□□□ -1.07
LINS1-209ENST00000560783 FAM9AQ8IZU1 332 aaPredicted RBP8.39□□□□□ -1.07
LINS1-209ENST00000560783 KDF1Q8NAX2 398 aaPredicted RBP8.39□□□□□ -1.07
LINS1-209ENST00000560783 KIFC2Q96AC6 838 aa8.39□□□□□ -1.07
LINS1-209ENST00000560783 CCDC85AQ96PX6 553 aaPredicted RBP8.39□□□□□ -1.07
LINS1-209ENST00000560783 PURBQ96QR8 312 aaKnown RBP8.39□□□□□ -1.07
LINS1-209ENST00000560783 ESF1Q9H501 851 aaKnown RBP8.39□□□□□ -1.07
LINS1-209ENST00000560783 CHIC2Q9UKJ5 165 aa8.39□□□□□ -1.07
LINS1-209ENST00000560783 KIF27Q86VH2 1401 aa8.38□□□□□ -1.07
LINS1-209ENST00000560783 CARMIL1Q5VZK9 1371 aa8.38□□□□□ -1.07
LINS1-209ENST00000560783 SUPT6HQ7KZ85 1726 aaKnown RBP8.38□□□□□ -1.07
LINS1-209ENST00000560783 C11orf95C9JLR9 678 aaPredicted RBP8.38□□□□□ -1.07
LINS1-209ENST00000560783 SOX11P35716 441 aa8.38□□□□□ -1.07
LINS1-209ENST00000560783 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
LINS1-209ENST00000560783 ALG2Q9H553 416 aa8.38□□□□□ -1.07
LINS1-209ENST00000560783 A6NJR5 290 aa8.37□□□□□ -1.07
LINS1-209ENST00000560783 POM121CA8CG34 1229 aa8.37□□□□□ -1.07
LINS1-209ENST00000560783 ERVK-9P63128 1117 aa8.37□□□□□ -1.07
LINS1-209ENST00000560783 TSGA10IPQ3SY00 556 aa8.37□□□□□ -1.07
LINS1-209ENST00000560783 TSEN34Q9BSV6 310 aaKnown RBP8.37□□□□□ -1.07
LINS1-209ENST00000560783 CNTLNQ9NXG0 1405 aa8.37□□□□□ -1.07
LINS1-209ENST00000560783 LRRC7Q96NW7 1537 aa8.36□□□□□ -1.07
LINS1-209ENST00000560783 SCARF1Q14162 830 aa8.36□□□□□ -1.07
LINS1-209ENST00000560783 ADAMTS19Q8TE59 1207 aa8.36□□□□□ -1.07
LINS1-209ENST00000560783 AGBL1Q96MI9 1066 aa8.36□□□□□ -1.07
LINS1-209ENST00000560783 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
LINS1-209ENST00000560783 GOLGA3Q08378 1498 aa8.36□□□□□ -1.07
LINS1-209ENST00000560783 MYO3AQ8NEV4 1616 aa8.36□□□□□ -1.07
LINS1-209ENST00000560783 CEP170BQ9Y4F5 1589 aaPredicted RBP8.35□□□□□ -1.07
LINS1-209ENST00000560783 ATP10BO94823 1461 aa8.35□□□□□ -1.07
LINS1-209ENST00000560783 ADH1AP07327 375 aa8.35□□□□□ -1.07
LINS1-209ENST00000560783 SCTRP47872 440 aa8.35□□□□□ -1.07
LINS1-209ENST00000560783 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
LINS1-209ENST00000560783 PROSER2Q86WR7 435 aaPredicted RBP8.35□□□□□ -1.07
LINS1-209ENST00000560783 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
LINS1-209ENST00000560783 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms