RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 DDX17Q92841 729 aaKnown RBP31.58■■■□□ 2.65
SHF-208ENST00000560734 CCT4P50991 539 aaKnown RBP31.57■■■□□ 2.64
SHF-208ENST00000560734 RNMTO43148 476 aaKnown RBP31.55■■■□□ 2.64
SHF-208ENST00000560734 TEFQ10587 303 aa31.55■■■□□ 2.64
SHF-208ENST00000560734 LGR6Q9HBX8 967 aa31.55■■■□□ 2.64
SHF-208ENST00000560734 EIF4A1P60842 406 aaKnown RBP31.53■■■□□ 2.64
SHF-208ENST00000560734 RPAP2Q8IXW5 612 aaPredicted RBP31.53■■■□□ 2.64
SHF-208ENST00000560734 PXDNLA1KZ92 1463 aa31.52■■■□□ 2.64
SHF-208ENST00000560734 DDRGK1Q96HY6 314 aa31.52■■■□□ 2.64
SHF-208ENST00000560734 RAPGEF4Q8WZA2 1011 aa31.51■■■□□ 2.63
SHF-208ENST00000560734 CHD1LQ86WJ1 897 aa31.49■■■□□ 2.63
SHF-208ENST00000560734 SIRT2Q8IXJ6 389 aa31.49■■■□□ 2.63
SHF-208ENST00000560734 N4BP2Q86UW6 1770 aaPredicted RBP31.49■■■□□ 2.63
SHF-208ENST00000560734 FLIIQ13045 1269 aa31.49■■■□□ 2.63
SHF-208ENST00000560734 G2E3Q7L622 706 aa31.49■■■□□ 2.63
SHF-208ENST00000560734 ZBTB47Q9UFB7 747 aaPredicted RBP31.49■■■□□ 2.63
SHF-208ENST00000560734 BTBD11A6QL63 1104 aa31.48■■■□□ 2.63
SHF-208ENST00000560734 TATP17735 454 aaPredicted RBP31.48■■■□□ 2.63
SHF-208ENST00000560734 ANKRD44Q8N8A2 993 aa31.48■■■□□ 2.63
SHF-208ENST00000560734 SPG7Q9UQ90 795 aa31.48■■■□□ 2.63
SHF-208ENST00000560734 SIPA1L3O60292 1781 aaPredicted RBP31.48■■■□□ 2.63
SHF-208ENST00000560734 PLEKHG5O94827 1062 aa31.47■■■□□ 2.63
SHF-208ENST00000560734 NLRP2Q9NX02 1062 aa31.47■■■□□ 2.63
SHF-208ENST00000560734 ATP10DQ9P241 1426 aa31.47■■■□□ 2.63
SHF-208ENST00000560734 MPRIPQ6WCQ1 1025 aa31.46■■■□□ 2.63
SHF-208ENST00000560734 HEG1Q9ULI3 1381 aa31.46■■■□□ 2.63
SHF-208ENST00000560734 HDGFL1Q5TGJ6 251 aa31.46■■■□□ 2.63
SHF-208ENST00000560734 NPM2Q86SE8 214 aaKnown RBP31.46■■■□□ 2.63
SHF-208ENST00000560734 CABLES1Q8TDN4 633 aa31.45■■■□□ 2.63
SHF-208ENST00000560734 C1orf115Q9H7X2 142 aa31.45■■■□□ 2.63
SHF-208ENST00000560734 DCTPP1Q9H773 170 aa31.44■■■□□ 2.62
SHF-208ENST00000560734 NHSL1Q5SYE7 1610 aa31.43■■■□□ 2.62
SHF-208ENST00000560734 PKD1L3Q7Z443 1732 aa31.41■■■□□ 2.62
SHF-208ENST00000560734 CSB-PGBD3P0DP91 1061 aa31.41■■■□□ 2.62
SHF-208ENST00000560734 FKBP5Q13451 457 aaPredicted RBP31.41■■■□□ 2.62
SHF-208ENST00000560734 CEP85Q6P2H3 762 aa31.4■■■□□ 2.62
SHF-208ENST00000560734 SCN11AQ9UI33 1791 aa31.39■■■□□ 2.62
SHF-208ENST00000560734 MEGF6O75095 1541 aa31.39■■■□□ 2.62
SHF-208ENST00000560734 GNAI3P08754 354 aa31.38■■■□□ 2.61
SHF-208ENST00000560734 IFNL2Q8IZJ0 200 aa31.38■■■□□ 2.61
SHF-208ENST00000560734 MEIS3Q99687 375 aa31.38■■■□□ 2.61
SHF-208ENST00000560734 PHKG2P15735 406 aa31.38■■■□□ 2.61
SHF-208ENST00000560734 HMMRO75330 724 aa31.37■■■□□ 2.61
SHF-208ENST00000560734 HSP90AB1P08238 724 aaKnown RBP31.37■■■□□ 2.61
SHF-208ENST00000560734 ANKRD45Q5TZF3 282 aa31.37■■■□□ 2.61
SHF-208ENST00000560734 ABCA3Q99758 1704 aa31.36■■■□□ 2.61
SHF-208ENST00000560734 F6X3S4 739 aa31.36■■■□□ 2.61
SHF-208ENST00000560734 CHRNA2Q15822 529 aa31.36■■■□□ 2.61
SHF-208ENST00000560734 MRC1P22897 1456 aa31.36■■■□□ 2.61
SHF-208ENST00000560734 SLC4A10Q6U841 1118 aa31.35■■■□□ 2.61
SHF-208ENST00000560734 LNPKQ9C0E8 428 aa31.35■■■□□ 2.61
SHF-208ENST00000560734 WDR17Q8IZU2 1322 aa31.35■■■□□ 2.61
SHF-208ENST00000560734 KDM6AO15550 1401 aaPredicted RBP31.34■■■□□ 2.61
SHF-208ENST00000560734 GIGYF1O75420 1035 aaPredicted RBP31.34■■■□□ 2.61
SHF-208ENST00000560734 GNAI2P04899 355 aa31.34■■■□□ 2.61
SHF-208ENST00000560734 UPF2Q9HAU5 1272 aaKnown RBP31.34■■■□□ 2.61
SHF-208ENST00000560734 BMP2KLQ5H9B9 411 aa31.33■■■□□ 2.61
SHF-208ENST00000560734 DCAF5Q96JK2 942 aa31.33■■■□□ 2.61
SHF-208ENST00000560734 SLC52A2Q9HAB3 445 aa31.33■■■□□ 2.61
SHF-208ENST00000560734 PRDM11Q9NQV5 511 aa31.33■■■□□ 2.61
SHF-208ENST00000560734 DBF4Q9UBU7 674 aaPredicted RBP31.33■■■□□ 2.61
SHF-208ENST00000560734 KCNQ3O43525 872 aa31.32■■■□□ 2.61
SHF-208ENST00000560734 PARP4Q9UKK3 1724 aaKnown RBP31.31■■■□□ 2.6
SHF-208ENST00000560734 NECTIN2Q92692 538 aa31.3■■■□□ 2.6
SHF-208ENST00000560734 COL5A2P05997 1499 aaPredicted RBP31.3■■■□□ 2.6
SHF-208ENST00000560734 EIF2S2P20042 333 aaKnown RBP31.28■■■□□ 2.6
SHF-208ENST00000560734 CHPF2Q9P2E5 772 aa31.28■■■□□ 2.6
SHF-208ENST00000560734 SEC24BO95487 1268 aa31.27■■■□□ 2.6
SHF-208ENST00000560734 PHAXQ9H814 394 aaKnown RBP31.27■■■□□ 2.6
SHF-208ENST00000560734 ZNF790Q6PG37 636 aa31.26■■■□□ 2.59
SHF-208ENST00000560734 CARD10Q9BWT7 1032 aa31.25■■■□□ 2.59
SHF-208ENST00000560734 HYPKQ9NX55 129 aa31.25■■■□□ 2.59
SHF-208ENST00000560734 CYP27B1O15528 508 aa31.24■■■□□ 2.59
SHF-208ENST00000560734 EIF5BO60841 1220 aaKnown RBP31.24■■■□□ 2.59
SHF-208ENST00000560734 SRCIN1Q9C0H9 1055 aa31.24■■■□□ 2.59
SHF-208ENST00000560734 IBTKQ9P2D0 1353 aaPredicted RBP31.23■■■□□ 2.59
SHF-208ENST00000560734 ATP8B2P98198 1209 aa31.23■■■□□ 2.59
SHF-208ENST00000560734 DNAAF4Q8WXU2 420 aa31.23■■■□□ 2.59
SHF-208ENST00000560734 TBC1D32Q96NH3 1257 aa31.23■■■□□ 2.59
SHF-208ENST00000560734 USP44Q9H0E7 712 aa31.22■■■□□ 2.59
SHF-208ENST00000560734 PCDH11XQ9BZA7 1347 aa31.21■■■□□ 2.59
SHF-208ENST00000560734 PCDH11YQ9BZA8 1340 aa31.21■■■□□ 2.59
SHF-208ENST00000560734 TOM1L2Q6ZVM7 507 aa31.2■■■□□ 2.58
SHF-208ENST00000560734 DDX21Q9NR30 783 aaKnown RBP eCLIP31.2■■■□□ 2.58
SHF-208ENST00000560734 BEND3Q5T5X7 828 aa31.19■■■□□ 2.58
SHF-208ENST00000560734 NFATC2IPQ8NCF5 419 aa31.19■■■□□ 2.58
SHF-208ENST00000560734 UBTFL1P0CB47 393 aaPredicted RBP31.18■■■□□ 2.58
SHF-208ENST00000560734 ADCY9O60503 1353 aa31.18■■■□□ 2.58
SHF-208ENST00000560734 AHDC1Q5TGY3 1603 aaPredicted RBP31.18■■■□□ 2.58
SHF-208ENST00000560734 ALDH1L1O75891 902 aa31.18■■■□□ 2.58
SHF-208ENST00000560734 NKX1-1Q15270 411 aaPredicted RBP31.18■■■□□ 2.58
SHF-208ENST00000560734 PLEKHM2Q8IWE5 1019 aa31.18■■■□□ 2.58
SHF-208ENST00000560734 PI4KAP2A4QPH2 592 aa31.17■■■□□ 2.58
SHF-208ENST00000560734 UBAP1LF5GYI3 381 aa31.17■■■□□ 2.58
SHF-208ENST00000560734 KSR2Q6VAB6 950 aa31.17■■■□□ 2.58
SHF-208ENST00000560734 PI4KAP1Q8N8J0 262 aa31.17■■■□□ 2.58
SHF-208ENST00000560734 ZCRB1Q8TBF4 217 aaKnown RBP31.17■■■□□ 2.58
SHF-208ENST00000560734 HDAC5Q9UQL6 1122 aa31.17■■■□□ 2.58
SHF-208ENST00000560734 DDX58O95786 925 aaKnown RBP31.15■■■□□ 2.58
SHF-208ENST00000560734 IL2RBP14784 551 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms