RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 TESK2Q96S53 571 aa10.56□□□□□ -0.72
APH1B-209ENST00000560716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.56□□□□□ -0.72
APH1B-209ENST00000560716 TONSLQ96HA7 1378 aa10.55□□□□□ -0.72
APH1B-209ENST00000560716 ZNF526Q8TF50 670 aaPredicted RBP10.55□□□□□ -0.72
APH1B-209ENST00000560716 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
APH1B-209ENST00000560716 AK7Q96M32 723 aa10.55□□□□□ -0.72
APH1B-209ENST00000560716 MYH14Q7Z406 1995 aaKnown RBP10.55□□□□□ -0.72
APH1B-209ENST00000560716 FLT4P35916 1363 aa10.54□□□□□ -0.72
APH1B-209ENST00000560716 LOC102724428A0A0B4J2F2 783 aa10.54□□□□□ -0.72
APH1B-209ENST00000560716 FYB1O15117 783 aa10.54□□□□□ -0.72
APH1B-209ENST00000560716 SIK1P57059 783 aa10.54□□□□□ -0.72
APH1B-209ENST00000560716 PIGBQ92521 554 aa10.54□□□□□ -0.72
APH1B-209ENST00000560716 CARD11Q9BXL7 1154 aa10.54□□□□□ -0.72
APH1B-209ENST00000560716 KDRP35968 1356 aa10.53□□□□□ -0.72
APH1B-209ENST00000560716 MPRIPQ6WCQ1 1025 aa10.53□□□□□ -0.72
APH1B-209ENST00000560716 LINC00116Q8NCU8 138 aa10.53□□□□□ -0.72
APH1B-209ENST00000560716 SIN3AQ96ST3 1273 aa10.53□□□□□ -0.72
APH1B-209ENST00000560716 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.72
APH1B-209ENST00000560716 FBLN1P23142 703 aa10.52□□□□□ -0.73
APH1B-209ENST00000560716 RC3H1Q5TC82 1133 aaKnown RBP10.52□□□□□ -0.73
APH1B-209ENST00000560716 NLGN1Q8N2Q7 840 aa10.52□□□□□ -0.73
APH1B-209ENST00000560716 ADAMTS7Q9UKP4 1686 aa10.52□□□□□ -0.73
APH1B-209ENST00000560716 PCNTO95613 3336 aa10.51□□□□□ -0.73
APH1B-209ENST00000560716 KCNA3P22001 575 aa10.51□□□□□ -0.73
APH1B-209ENST00000560716 PRELPP51888 382 aa10.51□□□□□ -0.73
APH1B-209ENST00000560716 ITPK1Q13572 414 aa10.51□□□□□ -0.73
APH1B-209ENST00000560716 HSP90AB2PQ58FF8 381 aa10.51□□□□□ -0.73
APH1B-209ENST00000560716 ZC3H4Q9UPT8 1303 aaKnown RBP10.51□□□□□ -0.73
APH1B-209ENST00000560716 KDM6AO15550 1401 aaPredicted RBP10.5□□□□□ -0.73
APH1B-209ENST00000560716 NRXN2Q9P2S2 1712 aa10.5□□□□□ -0.73
APH1B-209ENST00000560716 MMP10P09238 476 aa10.5□□□□□ -0.73
APH1B-209ENST00000560716 RRS1Q15050 365 aaKnown RBP10.5□□□□□ -0.73
APH1B-209ENST00000560716 COL13A1Q5TAT6 717 aaPredicted RBP10.5□□□□□ -0.73
APH1B-209ENST00000560716 NMRK2Q9NPI5 230 aa10.5□□□□□ -0.73
APH1B-209ENST00000560716 CCDC88AQ3V6T2 1871 aa10.5□□□□□ -0.73
APH1B-209ENST00000560716 DICER1Q9UPY3 1922 aaKnown RBP10.5□□□□□ -0.73
APH1B-209ENST00000560716 USHBP1Q8N6Y0 703 aa10.49□□□□□ -0.73
APH1B-209ENST00000560716 DCAF5Q96JK2 942 aa10.49□□□□□ -0.73
APH1B-209ENST00000560716 SPG7Q9UQ90 795 aa10.49□□□□□ -0.73
APH1B-209ENST00000560716 CNTNAP4Q9C0A0 1308 aa10.49□□□□□ -0.73
APH1B-209ENST00000560716 GNPATO15228 680 aa10.48□□□□□ -0.73
APH1B-209ENST00000560716 TMF1P82094 1093 aa10.48□□□□□ -0.73
APH1B-209ENST00000560716 CCDC87Q9NVE4 849 aa10.48□□□□□ -0.73
APH1B-209ENST00000560716 WASHC2AQ641Q2 1341 aa10.48□□□□□ -0.73
APH1B-209ENST00000560716 KDM2BQ8NHM5 1336 aa10.48□□□□□ -0.73
APH1B-209ENST00000560716 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
APH1B-209ENST00000560716 PHF14O94880 888 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 GYS1P13807 737 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 ATP6V1AP38606 617 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 TRAPPC3LQ5T215 181 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 SMIM5Q71RC9 77 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 ATG3Q9NT62 314 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 TMOD3Q9NYL9 352 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 ASAP1Q9ULH1 1129 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 BCS1LQ9Y276 419 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 RTCBQ9Y3I0 505 aaKnown RBP10.47□□□□□ -0.73
APH1B-209ENST00000560716 KCPQ6ZWJ8 1503 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 TJP1Q07157 1748 aa10.47□□□□□ -0.73
APH1B-209ENST00000560716 ST20-MTHFSA0A0A6YYL1 179 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 A0A0G2JLW4 131 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 RPS6KA4O75676 772 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 PHKG2P15735 406 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 DPEP1P16444 411 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 C9orf131Q5VYM1 1079 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 ARHGAP27Q6ZUM4 889 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 IFNL2Q8IZJ0 200 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 SLC4A9Q96Q91 983 aa10.46□□□□□ -0.73
APH1B-209ENST00000560716 SCN11AQ9UI33 1791 aa10.45□□□□□ -0.74
APH1B-209ENST00000560716 TIAM2Q8IVF5 1701 aa10.45□□□□□ -0.74
APH1B-209ENST00000560716 ERVV-2B6SEH9 535 aa10.45□□□□□ -0.74
APH1B-209ENST00000560716 FCHSD2O94868 740 aa10.45□□□□□ -0.74
APH1B-209ENST00000560716 FKBP8Q14318 412 aa10.45□□□□□ -0.74
APH1B-209ENST00000560716 SMC1BQ8NDV3 1235 aa10.45□□□□□ -0.74
APH1B-209ENST00000560716 ARHGEF1Q92888 912 aaKnown RBP10.45□□□□□ -0.74
APH1B-209ENST00000560716 GGNBP2Q9H3C7 697 aa10.45□□□□□ -0.74
APH1B-209ENST00000560716 PIM2Q9P1W9 311 aa10.45□□□□□ -0.74
APH1B-209ENST00000560716 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
APH1B-209ENST00000560716 C16orf71Q8IYS4 520 aaPredicted RBP10.44□□□□□ -0.74
APH1B-209ENST00000560716 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
APH1B-209ENST00000560716 VIRMAQ69YN4 1812 aaKnown RBP10.44□□□□□ -0.74
APH1B-209ENST00000560716 FER1L6Q2WGJ9 1857 aa10.43□□□□□ -0.74
APH1B-209ENST00000560716 EYA1Q99502 592 aa10.43□□□□□ -0.74
APH1B-209ENST00000560716 WWC3Q9ULE0 1092 aa10.43□□□□□ -0.74
APH1B-209ENST00000560716 PARP3Q9Y6F1 533 aa10.43□□□□□ -0.74
APH1B-209ENST00000560716 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
APH1B-209ENST00000560716 USP42Q9H9J4 1324 aaKnown RBP10.41□□□□□ -0.74
APH1B-209ENST00000560716 HSP90AB1P08238 724 aaKnown RBP10.41□□□□□ -0.74
APH1B-209ENST00000560716 TM4SF1P30408 202 aa10.41□□□□□ -0.74
APH1B-209ENST00000560716 RFC4P35249 363 aa10.41□□□□□ -0.74
APH1B-209ENST00000560716 HTRA3P83110 453 aa10.41□□□□□ -0.74
APH1B-209ENST00000560716 CDCA8Q53HL2 280 aa10.41□□□□□ -0.74
APH1B-209ENST00000560716 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
APH1B-209ENST00000560716 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
APH1B-209ENST00000560716 RRAGCQ9HB90 399 aa10.41□□□□□ -0.74
APH1B-209ENST00000560716 EMILIN1Q9Y6C2 1016 aa10.41□□□□□ -0.74
APH1B-209ENST00000560716 ARFGEF2Q9Y6D5 1785 aa10.4□□□□□ -0.74
APH1B-209ENST00000560716 GLTPD2A6NH11 291 aa10.4□□□□□ -0.74
APH1B-209ENST00000560716 VEGFAP15692 232 aaPredicted RBP10.4□□□□□ -0.74
APH1B-209ENST00000560716 RNF181Q9P0P0 153 aa10.4□□□□□ -0.74
APH1B-209ENST00000560716 ANKRD31Q8N7Z5 1873 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms