RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 USP31Q70CQ4 1352 aa22.36■■□□□ 1.17
SNX22-204ENST00000560607 A0A0G2JLW4 131 aa22.35■■□□□ 1.17
SNX22-204ENST00000560607 ANP32CO43423 234 aa22.35■■□□□ 1.17
SNX22-204ENST00000560607 FCHSD2O94868 740 aa22.35■■□□□ 1.17
SNX22-204ENST00000560607 LTV1Q96GA3 475 aaPredicted RBP22.32■■□□□ 1.16
SNX22-204ENST00000560607 PALLDQ8WX93 1383 aa22.31■■□□□ 1.16
SNX22-204ENST00000560607 MMP10P09238 476 aa22.3■■□□□ 1.16
SNX22-204ENST00000560607 SSFA2P28290 1259 aa22.3■■□□□ 1.16
SNX22-204ENST00000560607 TNNT2P45379 298 aaPredicted RBP22.3■■□□□ 1.16
SNX22-204ENST00000560607 RALBP1Q15311 655 aa22.29■■□□□ 1.16
SNX22-204ENST00000560607 PRDM10Q9NQV6 1147 aa22.29■■□□□ 1.16
SNX22-204ENST00000560607 RNF181Q9P0P0 153 aa22.29■■□□□ 1.16
SNX22-204ENST00000560607 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
SNX22-204ENST00000560607 PRKRIP1Q9H875 184 aaPredicted RBP22.28■■□□□ 1.16
SNX22-204ENST00000560607 TAF1LQ8IZX4 1826 aa22.27■■□□□ 1.16
SNX22-204ENST00000560607 DPEP1P16444 411 aa22.27■■□□□ 1.16
SNX22-204ENST00000560607 IP6K1Q92551 441 aa22.27■■□□□ 1.16
SNX22-204ENST00000560607 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
SNX22-204ENST00000560607 FOXN1O15353 648 aa22.26■■□□□ 1.15
SNX22-204ENST00000560607 TNRC6CQ9HCJ0 1690 aaKnown RBP22.25■■□□□ 1.15
SNX22-204ENST00000560607 TOGARAM1Q9Y4F4 1720 aa22.25■■□□□ 1.15
SNX22-204ENST00000560607 MPRIPQ6WCQ1 1025 aa22.24■■□□□ 1.15
SNX22-204ENST00000560607 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
SNX22-204ENST00000560607 SMARCC1Q92922 1105 aaPredicted RBP22.23■■□□□ 1.15
SNX22-204ENST00000560607 UBR3Q6ZT12 1888 aa22.23■■□□□ 1.15
SNX22-204ENST00000560607 PKD1L3Q7Z443 1732 aa22.23■■□□□ 1.15
SNX22-204ENST00000560607 KIF13BQ9NQT8 1826 aa22.22■■□□□ 1.15
SNX22-204ENST00000560607 VEGFAP15692 232 aaPredicted RBP22.22■■□□□ 1.15
SNX22-204ENST00000560607 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
SNX22-204ENST00000560607 MLLT1Q03111 559 aaPredicted RBP22.21■■□□□ 1.15
SNX22-204ENST00000560607 MEGF6O75095 1541 aa22.21■■□□□ 1.15
SNX22-204ENST00000560607 FBLN1P23142 703 aa22.2■■□□□ 1.14
SNX22-204ENST00000560607 PPP2R1AP30153 589 aa22.2■■□□□ 1.14
SNX22-204ENST00000560607 CTCFP49711 727 aaPredicted RBP22.2■■□□□ 1.14
SNX22-204ENST00000560607 CCDC87Q9NVE4 849 aa22.2■■□□□ 1.14
SNX22-204ENST00000560607 MKRN1Q9UHC7 482 aaKnown RBP22.2■■□□□ 1.14
SNX22-204ENST00000560607 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.14
SNX22-204ENST00000560607 ABHD8Q96I13 439 aa22.19■■□□□ 1.14
SNX22-204ENST00000560607 DCAF5Q96JK2 942 aa22.19■■□□□ 1.14
SNX22-204ENST00000560607 PIM2Q9P1W9 311 aa22.19■■□□□ 1.14
SNX22-204ENST00000560607 GNPATO15228 680 aa22.18■■□□□ 1.14
SNX22-204ENST00000560607 PPM1GO15355 546 aaPredicted RBP22.18■■□□□ 1.14
SNX22-204ENST00000560607 KCNA3P22001 575 aa22.18■■□□□ 1.14
SNX22-204ENST00000560607 RRS1Q15050 365 aaKnown RBP22.18■■□□□ 1.14
SNX22-204ENST00000560607 AIDAQ96BJ3 306 aa22.18■■□□□ 1.14
SNX22-204ENST00000560607 DALRD3Q5D0E6 543 aaKnown RBP22.17■■□□□ 1.14
SNX22-204ENST00000560607 NLGN1Q8N2Q7 840 aa22.17■■□□□ 1.14
SNX22-204ENST00000560607 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
SNX22-204ENST00000560607 EMILIN1Q9Y6C2 1016 aa22.16■■□□□ 1.14
SNX22-204ENST00000560607 MAP3K19Q56UN5 1328 aa22.15■■□□□ 1.14
SNX22-204ENST00000560607 AMPHP49418 695 aa22.15■■□□□ 1.14
SNX22-204ENST00000560607 MIER1Q8N108 512 aa22.15■■□□□ 1.14
SNX22-204ENST00000560607 CREBZFQ9NS37 354 aa22.15■■□□□ 1.14
SNX22-204ENST00000560607 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
SNX22-204ENST00000560607 ZC3H4Q9UPT8 1303 aaKnown RBP22.14■■□□□ 1.14
SNX22-204ENST00000560607 MTHFSP49914 203 aa22.14■■□□□ 1.13
SNX22-204ENST00000560607 RAPGEF4Q8WZA2 1011 aa22.14■■□□□ 1.13
SNX22-204ENST00000560607 POLKQ9UBT6 870 aa22.14■■□□□ 1.13
SNX22-204ENST00000560607 RGPD2P0DJD1 1756 aa22.14■■□□□ 1.13
SNX22-204ENST00000560607 LOC102724428A0A0B4J2F2 783 aa22.13■■□□□ 1.13
SNX22-204ENST00000560607 GLTPD2A6NH11 291 aa22.13■■□□□ 1.13
SNX22-204ENST00000560607 SIK1P57059 783 aa22.13■■□□□ 1.13
SNX22-204ENST00000560607 ARFGEF1Q9Y6D6 1849 aa22.13■■□□□ 1.13
SNX22-204ENST00000560607 RTL1A6NKG5 1358 aa22.12■■□□□ 1.13
SNX22-204ENST00000560607 BRCA1P38398 1863 aaKnown RBP22.12■■□□□ 1.13
SNX22-204ENST00000560607 LBX1P52954 281 aa22.12■■□□□ 1.13
SNX22-204ENST00000560607 CFAP53Q96M91 514 aa22.12■■□□□ 1.13
SNX22-204ENST00000560607 PARP3Q9Y6F1 533 aa22.12■■□□□ 1.13
SNX22-204ENST00000560607 FLT4P35916 1363 aa22.12■■□□□ 1.13
SNX22-204ENST00000560607 PCDH11XQ9BZA7 1347 aa22.11■■□□□ 1.13
SNX22-204ENST00000560607 PCDH11YQ9BZA8 1340 aa22.11■■□□□ 1.13
SNX22-204ENST00000560607 HOXC9P31274 260 aa22.11■■□□□ 1.13
SNX22-204ENST00000560607 KIF24Q5T7B8 1368 aa22.11■■□□□ 1.13
SNX22-204ENST00000560607 RGS19P49795 217 aa22.1■■□□□ 1.13
SNX22-204ENST00000560607 TRAPPC3LQ5T215 181 aa22.1■■□□□ 1.13
SNX22-204ENST00000560607 TATP17735 454 aaPredicted RBP22.09■■□□□ 1.13
SNX22-204ENST00000560607 PIGBQ92521 554 aa22.09■■□□□ 1.13
SNX22-204ENST00000560607 CCDC85CA6NKD9 419 aa22.08■■□□□ 1.13
SNX22-204ENST00000560607 NBPF6Q5VWK0 638 aa22.08■■□□□ 1.13
SNX22-204ENST00000560607 USHBP1Q8N6Y0 703 aa22.08■■□□□ 1.13
SNX22-204ENST00000560607 NBPF4Q96M43 638 aa22.08■■□□□ 1.13
SNX22-204ENST00000560607 ITPK1Q13572 414 aa22.07■■□□□ 1.12
SNX22-204ENST00000560607 MRS2Q9HD23 443 aa22.07■■□□□ 1.12
SNX22-204ENST00000560607 RTCBQ9Y3I0 505 aaKnown RBP22.07■■□□□ 1.12
SNX22-204ENST00000560607 CNTNAP1P78357 1384 aa22.07■■□□□ 1.12
SNX22-204ENST00000560607 ATP6V1AP38606 617 aa22.06■■□□□ 1.12
SNX22-204ENST00000560607 SBF1O95248 1867 aa22.06■■□□□ 1.12
SNX22-204ENST00000560607 COL3A1P02461 1466 aaPredicted RBP22.05■■□□□ 1.12
SNX22-204ENST00000560607 LMNB1P20700 586 aa22.05■■□□□ 1.12
SNX22-204ENST00000560607 RASSF7Q02833 373 aa22.05■■□□□ 1.12
SNX22-204ENST00000560607 HSP90AB2PQ58FF8 381 aa22.05■■□□□ 1.12
SNX22-204ENST00000560607 C4AP0C0L4 1744 aa22.05■■□□□ 1.12
SNX22-204ENST00000560607 INSRP06213 1382 aa22.04■■□□□ 1.12
SNX22-204ENST00000560607 CCER2I3L3R5 266 aa22.04■■□□□ 1.12
SNX22-204ENST00000560607 CYP27B1O15528 508 aa22.04■■□□□ 1.12
SNX22-204ENST00000560607 WBP1LQ9NX94 342 aa22.04■■□□□ 1.12
SNX22-204ENST00000560607 GYS1P13807 737 aa22.03■■□□□ 1.12
SNX22-204ENST00000560607 POTECB2RU33 542 aa22.02■■□□□ 1.12
SNX22-204ENST00000560607 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
SNX22-204ENST00000560607 CHRNA5P30532 468 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms